ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl06a04 |
|---|---|
| Clone Library Name | barley_pub |
>MDARP_ARATH (P92947) Monodehydroascorbate reductase, chloroplast precursor (EC| 1.6.5.4) (MDAR) Length = 493 Score = 29.6 bits (65), Expect = 1.8 Identities = 20/59 (33%), Positives = 31/59 (52%) Frame = +3 Query: 138 INTNRIVGLINKSKYPKHNDLIPASFSSVGGPQWLASDSKLKHWFSVEQAFSIAQSTIQ 314 I + R+ G++ +S P+ L+P S Q L +KL SVE+A IAQ+ +Q Sbjct: 438 IESGRLKGVLVESGSPEEFQLLPKLARS----QPLVDKAKLASASSVEEALEIAQAALQ 492
>CYSA_MYCTU (P0A4W2) Sulfate/thiosulfate import ATP-binding protein cysA (EC| 3.6.3.25) (Sulfate-transporting ATPase) Length = 353 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -1 Query: 327 SGSTPESLIERLKKLAQPKTNASTLNPKPATADHPRRRSL 208 SGS +L+ + L QP T T+N + T P+RR + Sbjct: 41 SGSGKSTLLRTIAGLDQPDTGTITINGRDVTRVPPQRRGI 80
>CYSA_MYCBO (P0A4W3) Sulfate/thiosulfate import ATP-binding protein cysA (EC| 3.6.3.25) (Sulfate-transporting ATPase) Length = 353 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -1 Query: 327 SGSTPESLIERLKKLAQPKTNASTLNPKPATADHPRRRSL 208 SGS +L+ + L QP T T+N + T P+RR + Sbjct: 41 SGSGKSTLLRTIAGLDQPDTGTITINGRDVTRVPPQRRGI 80
>SODC_PBCV1 (Q90023) Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)| Length = 187 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = +3 Query: 261 KHWFSVEQAFSIAQSTIQVCCHFSPFSS 344 KH F V +A + C HF+PF + Sbjct: 72 KHGFHVHEAGDLTDGCTSACAHFNPFGT 99
>GSA_SHEON (Q8EHC8) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 430 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%) Frame = -3 Query: 277 TENQCFNFESEASH--CGPPTEEKLAGIRSLC--FGYLLLL 167 TE C E A + C PP L G+RSLC FG LL++ Sbjct: 196 TEISCIIIEPVAGNMNCIPPIPGFLEGLRSLCDEFGALLII 236
>NAC1_HUMAN (P32418) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 973 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -2 Query: 134 IFWSVDF*YIIYTLYYNGVVCIICPALYIVL 42 +FW V F ++ T Y+NG C I L I L Sbjct: 783 VFWKVLFAFVPPTEYWNGWACFIVSILMIGL 813
>NAC1_RAT (Q01728) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 971 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -2 Query: 134 IFWSVDF*YIIYTLYYNGVVCIICPALYIVL 42 +FW V F ++ T Y+NG C I L I L Sbjct: 781 VFWKVLFAFVPPTEYWNGWACFIVSILMIGL 811
>GSA_SHIFL (Q821C1) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 238 HCGPPTEEKLAGIRSLC--FGYLLLL 167 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_SALTY (P21267) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 238 HCGPPTEEKLAGIRSLC--FGYLLLL 167 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_SALTI (Q8Z9B4) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 238 HCGPPTEEKLAGIRSLC--FGYLLLL 167 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_SALPA (Q5PD43) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 238 HCGPPTEEKLAGIRSLC--FGYLLLL 167 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_ECOLI (P23893) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 238 HCGPPTEEKLAGIRSLC--FGYLLLL 167 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>GSA_ECOL6 (Q8FL16) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 238 HCGPPTEEKLAGIRSLC--FGYLLLL 167 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPLPEFLPGLRALCDEFGALLII 236
>DDG_SHIFL (P0ACV3) Protein ddg| Length = 306 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 11/56 (19%) Frame = +3 Query: 180 YPKHN-----DLIPASFSSVG------GPQWLASDSKLKHWFSVEQAFSIAQSTIQ 314 +P+H+ +I +F S+G G W DS+++ WF VE ++ ++ +Q Sbjct: 67 FPQHSAEEREKMIAENFRSLGMALVETGMAWFWPDSRVRKWFDVEGLDNLKRAQMQ 122
>DDG_ECOLI (P0ACV2) Protein ddg| Length = 306 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 11/56 (19%) Frame = +3 Query: 180 YPKHN-----DLIPASFSSVG------GPQWLASDSKLKHWFSVEQAFSIAQSTIQ 314 +P+H+ +I +F S+G G W DS+++ WF VE ++ ++ +Q Sbjct: 67 FPQHSAEEREKMIAENFRSLGMALVETGMAWFWPDSRVRKWFDVEGLDNLKRAQMQ 122
>GSA_PHOLL (Q7N845) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 427 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 238 HCGPPTEEKLAGIRSLC--FGYLLLL 167 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCVPPQPEFLPGLRALCDEFGALLII 236
>EF1G1_YEAST (P29547) Elongation factor 1-gamma 1 (EF-1-gamma 1) (Translation| elongation factor 1B gamma 1) (Eukaryotic elongation factor 1Bgamma 1) (eEF1Bgamma 1) (Calcium and membrane-binding protein 1) (Calcium phospholipid-binding protein) (CPBP) Length = 415 Score = 27.7 bits (60), Expect = 6.9 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 8/87 (9%) Frame = +3 Query: 51 VKGRADYTNNSI--VIQCVDYVLEI--NRPKN---LINTN-RIVGLINKSKYPKHNDLIP 206 +KG A Y S+ + VD +++I NR KN L N + L+ S + ++ Sbjct: 118 LKGGAPYNKKSVDSAMDAVDKIVDIFENRLKNYTYLATENISLADLVAASIFTRY----- 172 Query: 207 ASFSSVGGPQWLASDSKLKHWFSVEQA 287 F S+ G +W A + WF+ +A Sbjct: 173 --FESLFGTEWRAQHPAIVRWFNTVRA 197
>AURKB_HUMAN (Q96GD4) Serine/threonine-protein kinase 12 (EC 2.7.11.1) (Aurora-| and Ipl1-like midbody-associated protein 1) (AIM-1) (Aurora/IPL1-related kinase 2) (Aurora-related kinase 2) (STK-1) (Aurora-B) Length = 344 Score = 27.7 bits (60), Expect = 6.9 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 3/86 (3%) Frame = +2 Query: 17 YTRVNV*IVIQCKGQGRLYKQLHCNTMCRLCTRNQQ---TKKFNQYKSNCWPHQQK*IPK 187 Y R + ++++ +G LYK+L + CT ++Q T + + H +K I + Sbjct: 145 YDRRRIYLILEYAPRGELYKELQ-----KSCTFDEQRTATIMEELADALMYCHGKKVIHR 199 Query: 188 AQRPYSGKLLLRGWSAVAGFGFKVEA 265 +P + L L+G +A FG+ V A Sbjct: 200 DIKPENLLLGLKGELKIADFGWSVHA 225
>NAC1_MOUSE (P70414) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -2 Query: 134 IFWSVDF*YIIYTLYYNGVVCIICPALYIVL 42 +FW V F ++ T Y+NG C I L I L Sbjct: 780 VFWKVLFAFVPPTEYWNGWACFIVSILMIGL 810
>NAC1_CAVPO (P48766) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -2 Query: 134 IFWSVDF*YIIYTLYYNGVVCIICPALYIVL 42 +FW V F ++ T Y+NG C I L I L Sbjct: 780 VFWKVLFAFVPPTEYWNGWACFIVSILMIGL 810
>NAC1_BOVIN (P48765) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -2 Query: 134 IFWSVDF*YIIYTLYYNGVVCIICPALYIVL 42 +FW V F ++ T Y+NG C I L I L Sbjct: 780 VFWKVLFAFVPPTEYWNGWACFIVSILMIGL 810
>ESM1_RAT (P97682) Endothelial cell-specific molecule 1 precursor (ESM-1| secretory protein) (ESM-1) (PG25) Length = 184 Score = 27.7 bits (60), Expect = 6.9 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = -1 Query: 102 LHIVLQWSCLYNLPCPLHC 46 LH+ + WS Y + CP HC Sbjct: 14 LHLGMAWSAKYAVDCPEHC 32
>ESM1_MOUSE (Q9QYY7) Endothelial cell-specific molecule 1 precursor (ESM-1| secretory protein) (ESM-1) Length = 184 Score = 27.7 bits (60), Expect = 6.9 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = -1 Query: 102 LHIVLQWSCLYNLPCPLHC 46 LH+ + WS Y + CP HC Sbjct: 14 LHLGMAWSAKYAVDCPEHC 32
>GDN_HUMAN (P07093) Glia-derived nexin precursor (GDN) (Protease nexin I)| (PN-1) (Protease inhibitor 7) Length = 398 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = +1 Query: 145 QIELLASSTKVNTQSTTTLFRQASPPWVV 231 +IE+ TK + +T L ++SPPW + Sbjct: 344 KIEVSEDGTKASAATTAILIARSSPPWFI 372
>YRHK_BACSU (O05401) Hypothetical protein yrhK| Length = 96 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = -3 Query: 208 AGIRSLCFGYLLLLMRPTIRFV 143 AGI G LLLL+RPTIR + Sbjct: 54 AGIWLFAIGSLLLLIRPTIRLI 75
>GSA_YERPS (Q66EF1) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 238 HCGPPTEEKLAGIRSLC--FGYLLLL 167 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCIPPLPEFLPGLRALCDEFGALLII 236
>GSA_YERPE (Q8ZBL9) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = -3 Query: 238 HCGPPTEEKLAGIRSLC--FGYLLLL 167 +C PP E L G+R+LC FG LL++ Sbjct: 211 NCIPPLPEFLPGLRALCDEFGALLII 236
>GDN_MOUSE (Q07235) Glia-derived nexin precursor (GDN) (Protease nexin I)| (PN-1) (Serine protease-inhibitor 4) Length = 397 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = +1 Query: 145 QIELLASSTKVNTQSTTTLFRQASPPWVV 231 +IE+ TK + +T L ++SPPW + Sbjct: 343 KIEVSEDGTKASAATTAILIARSSPPWFI 371
>DPM1_YEAST (P14020) Dolichol-phosphate mannosyltransferase (EC 2.4.1.83)| (Dolichol-phosphate mannose synthase) (Dolichyl-phosphate beta-D-mannosyltransferase) (Mannose-P-dolichol synthase) (MPD synthase) (DPM synthase) Length = 266 Score = 27.3 bits (59), Expect = 9.1 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 8/55 (14%) Frame = -2 Query: 227 THGGEACRNKVVV--------LWVFTFVDEANNSICID*IFWSVDF*YIIYTLYY 87 T G KV++ L+VF F N++ + FWS+ F Y+ Y LY+ Sbjct: 212 TEGESKLSGKVIIQYLQQLKELYVFKF---GANNLILFITFWSILFFYVCYQLYH 263
>NAC1_FELCA (P48767) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -2 Query: 134 IFWSVDF*YIIYTLYYNGVVCIICPALYI 48 +FW V F ++ T Y+NG C I L I Sbjct: 780 VFWKVLFAFVPPTEYWNGWACFIVSILMI 808
>NAC1_CANFA (P23685) Sodium/calcium exchanger 1 precursor| (Na(+)/Ca(2+)-exchange protein 1) Length = 970 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -2 Query: 134 IFWSVDF*YIIYTLYYNGVVCIICPALYI 48 +FW V F ++ T Y+NG C I L I Sbjct: 780 VFWKVLFAFVPPTEYWNGWACFIVSILMI 808
>EDG3_HUMAN (Q99500) Sphingosine 1-phosphate receptor Edg-3 (S1P receptor| Edg-3) (Endothelial differentiation G-protein coupled receptor 3) (Sphingosine 1-phosphate receptor 3) (S1P3) Length = 378 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 12/37 (32%) Frame = -1 Query: 93 VLQWSCLYNLP-----CPLH-------CITIYTLTLV 19 +L W+CL+NLP PL+ CI+I+T LV Sbjct: 173 ILGWNCLHNLPDCSTILPLYSKKYIAFCISIFTAILV 209 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,690,922 Number of Sequences: 219361 Number of extensions: 1124032 Number of successful extensions: 3178 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3177 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 1380984984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
