ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl06a01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3136 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 173 catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 232 ||||||||| || ||||||| || ||||||||||| | ||||| |||||| ||||| Sbjct: 3025 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 2966 Query: 233 atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 277 |||||| |||| ||||| | | ||| |||||||||||||||||| Sbjct: 2965 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 2921 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 aggaataattatatttcttctata 91 ||||||| |||||||||||||||| Sbjct: 3135 aggaatatttatatttcttctata 3112
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 173 catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 232 ||||||||| || ||||||| || ||||||||||| | ||||| |||||| ||||| Sbjct: 24610857 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 24610916 Query: 233 atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 277 |||||| |||| ||||| | | ||| |||||||||||||||||| Sbjct: 24610917 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 24610961 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 aggaataattatatttcttctata 91 ||||||| |||||||||||||||| Sbjct: 24610747 aggaatatttatatttcttctata 24610770
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0039M16 Length = 133229 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 173 catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 232 ||||||||| || ||||||| || ||||||||||| | ||||| |||||| ||||| Sbjct: 66924 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 66983 Query: 233 atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 277 |||||| |||| ||||| | | ||| |||||||||||||||||| Sbjct: 66984 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 67028 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 aggaataattatatttcttctata 91 ||||||| |||||||||||||||| Sbjct: 66814 aggaatatttatatttcttctata 66837
>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018H10 Length = 135879 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 173 catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 232 ||||||||| || ||||||| || ||||||||||| | ||||| |||||| ||||| Sbjct: 104151 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 104210 Query: 233 atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 277 |||||| |||| ||||| | | ||| |||||||||||||||||| Sbjct: 104211 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 104255 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 aggaataattatatttcttctata 91 ||||||| |||||||||||||||| Sbjct: 104041 aggaatatttatatttcttctata 104064
>dbj|AK066770.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088M15, full insert sequence Length = 3135 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 173 catattcagtttatactactgaaagacagctgcctacgcaatttccattgtccagcttgc 232 ||||||||| || ||||||| || ||||||||||| | ||||| |||||| ||||| Sbjct: 3024 catattcagcttgtactactaaatgacagctgcctctttaggttccactgtccaccttgc 2965 Query: 233 atcttctctgtagcctcgccacctataacctcgtcaatgaggtcc 277 |||||| |||| ||||| | | ||| |||||||||||||||||| Sbjct: 2964 atcttccctgtggcctcatcccatatgacctcgtcaatgaggtcc 2920
>ref|NM_013077.1| Rattus norvegicus tubby homolog (mouse) (Tub), mRNA Length = 1582 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 378 tgttttcatcctcatcctcttc 399 |||||||||||||||||||||| Sbjct: 617 tgttttcatcctcatcctcttc 596
>dbj|AB011544.1| Rattus norvegicus mRNA for TUBBY protein, complete cds Length = 1582 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 378 tgttttcatcctcatcctcttc 399 |||||||||||||||||||||| Sbjct: 617 tgttttcatcctcatcctcttc 596
>emb|AL159166.12| Human DNA sequence from clone RP3-527G5 on chromosome 6 Contains a putative novel gene, complete sequence Length = 72139 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 atttcttctatataattcagt 100 ||||||||||||||||||||| Sbjct: 46312 atttcttctatataattcagt 46292
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 attcagtcttcagagaaaaaataca 118 |||||||||||||||| |||||||| Sbjct: 3831279 attcagtcttcagagacaaaataca 3831303 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 cagggctaccccaatctctc 346 |||||||||||||||||||| Sbjct: 7183635 cagggctaccccaatctctc 7183654 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ttcagtcttcagagaaaaaa 114 |||||||||||||||||||| Sbjct: 1826837 ttcagtcttcagagaaaaaa 1826818
>gb|AC087091.2| Homo sapiens chromosome 3 clone RP11-605M1 map 3p, complete sequence Length = 153013 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 attcagtcttcagagaaaaaa 114 ||||||||||||||||||||| Sbjct: 95258 attcagtcttcagagaaaaaa 95238
>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_A06 Length = 176062 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 attcagtcttcagagaaaaaataca 118 |||||||||||||||| |||||||| Sbjct: 87611 attcagtcttcagagacaaaataca 87635
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 94 attcagtcttcagagaaaaaataca 118 |||||||||||||||| |||||||| Sbjct: 29750 attcagtcttcagagacaaaataca 29774
>gb|AC011609.9|AC011609 Homo sapiens 3 BAC RP11-114K9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184680 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 attcagtcttcagagaaaaaa 114 ||||||||||||||||||||| Sbjct: 83362 attcagtcttcagagaaaaaa 83342
>ref|NM_001017140.2| Xenopus tropicalis hypothetical protein LOC549894 (LOC549894), mRNA Length = 1122 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ttttcatcctcatcctcttc 399 |||||||||||||||||||| Sbjct: 615 ttttcatcctcatcctcttc 596
>gb|AC124127.12| Mus musculus chromosome 19, clone RP23-150N4, complete sequence Length = 194548 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 caatgaggtccctgaaaatg 286 |||||||||||||||||||| Sbjct: 18627 caatgaggtccctgaaaatg 18646
>ref|XM_458620.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D04213g) partial mRNA Length = 2490 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 cgtcaatgaggtccctgaaa 283 |||||||||||||||||||| Sbjct: 270 cgtcaatgaggtccctgaaa 289
>ref|XM_322144.1| Neurospora crassa OR74A hypothetical protein (NCU00059.1) partial mRNA Length = 2490 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgttttcatcctcatcctc 396 |||||||||||||||||||| Sbjct: 1976 atgttttcatcctcatcctc 1957
>ref|XM_950709.1| Neurospora crassa OR74A hypothetical protein (NCU00059.1) partial mRNA Length = 2490 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgttttcatcctcatcctc 396 |||||||||||||||||||| Sbjct: 1976 atgttttcatcctcatcctc 1957
>gb|AC113961.14| Mus musculus chromosome 19, clone RP23-18G1, complete sequence Length = 256791 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 caatgaggtccctgaaaatg 286 |||||||||||||||||||| Sbjct: 163342 caatgaggtccctgaaaatg 163361
>gb|AC145805.2| Xenopus tropicalis clone CH216-85O8, complete sequence Length = 166207 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 tatgttttcatcctcatcct 395 |||||||||||||||||||| Sbjct: 84525 tatgttttcatcctcatcct 84544
>gb|AC131667.4| Mus musculus BAC clone RP23-290D15 from chromosome 10, complete sequence Length = 196233 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 tcatattcagtttatactactgaa 195 |||| ||||||||||||||||||| Sbjct: 53081 tcatgttcagtttatactactgaa 53058
>emb|Z70036.1|CET01B4 Caenorhabditis elegans Cosmid T01B4, complete sequence Length = 34581 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ttttcatcctcatcctcttc 399 |||||||||||||||||||| Sbjct: 27609 ttttcatcctcatcctcttc 27590
>gb|AC136717.10| Mus musculus chromosome 7, clone RP23-48C24, complete sequence Length = 222854 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 tgtcagtgagaccagagttccagg 70 |||||||||| ||||||||||||| Sbjct: 53234 tgtcagtgagtccagagttccagg 53257
>gb|AC108435.5| Mus musculus chromosome 7, clone RP23-229O20, complete sequence Length = 203281 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 tgtcagtgagaccagagttccagg 70 |||||||||| ||||||||||||| Sbjct: 175844 tgtcagtgagtccagagttccagg 175867
>emb|AL160274.9| Human DNA sequence from clone RP11-395N21 on chromosome 9 Contains the 3' end of the UNC13 gene for unc-13-like (C. elegans)(MUNC13, hmunc13) and the 5' end of a novel gene, complete sequence Length = 144102 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 tcagataatggtatgttttc 384 |||||||||||||||||||| Sbjct: 9114 tcagataatggtatgttttc 9095
>emb|AL035258.10|HS1097P24 Human DNA sequence from clone RP5-1097P24 on chromosome 20p11.21-12.3 Contains a putative novel gene, ESTs, STSs and GSSs, complete sequence Length = 133072 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ttccaggaataattatattt 83 |||||||||||||||||||| Sbjct: 8862 ttccaggaataattatattt 8843
>emb|Z99108.2|BSUB0005 Bacillus subtilis complete genome (section 5 of 21): from 813670 to 1011078 Length = 197409 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gatattcagctgatcgctttttct 38 ||||||||||||||| |||||||| Sbjct: 170728 gatattcagctgatccctttttct 170751
>emb|X96983.1|BS75DGREG B.subtilis chromosomal DNA (region 75 degrees: cspB upstream of glpPFKD operon) Length = 21808 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 gatattcagctgatcgctttttct 38 ||||||||||||||| |||||||| Sbjct: 5943 gatattcagctgatccctttttct 5966
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 cgtcaatgaggtccctgaaa 283 |||||||||||||||||||| Sbjct: 299898 cgtcaatgaggtccctgaaa 299917
>gb|AC117474.7| Homo sapiens 3 BAC RP11-778P17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 144160 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 tactgaaagacagctgccta 208 |||||||||||||||||||| Sbjct: 119814 tactgaaagacagctgccta 119833
>emb|AL845158.5| Mouse DNA sequence from clone RP23-147E6 on chromosome 4 Contains a component of oligomeric golgi complex 1 (Cog5) pseudogene and part of the Ptprd gene for receptor type protein tyrosine phosphatase D, complete sequence Length = 198523 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 atggtatatgatattcagct 25 |||||||||||||||||||| Sbjct: 177405 atggtatatgatattcagct 177386
>emb|AJ720844.1| Gallus gallus mRNA for hypothetical protein, clone 27j21 Length = 1908 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 376 tatgttttcatcctcatcctcttc 399 |||||||||||| ||||||||||| Sbjct: 1494 tatgttttcatcttcatcctcttc 1471
>ref|NM_001006488.1| Gallus gallus eukaryotic translation initiation factor 5 (EIF5), mRNA Length = 1908 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 376 tatgttttcatcctcatcctcttc 399 |||||||||||| ||||||||||| Sbjct: 1494 tatgttttcatcttcatcctcttc 1471
>emb|CR626863.4| Mouse DNA sequence from clone RP23-348H1 on chromosome 2, complete sequence Length = 42053 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 ccagagttccaggaataatt 77 |||||||||||||||||||| Sbjct: 13169 ccagagttccaggaataatt 13188
>dbj|AK133320.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932433A15 product:unclassifiable, full insert sequence Length = 2695 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 tgtcagtgagaccagagttccagg 70 |||||||||| ||||||||||||| Sbjct: 1831 tgtcagtgagtccagagttccagg 1808
>gb|AC093807.3| Homo sapiens BAC clone RP11-330J16 from 4, complete sequence Length = 171415 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 tcagtttatactactgaaag 197 |||||||||||||||||||| Sbjct: 18541 tcagtttatactactgaaag 18560
>ref|XM_678692.1| PREDICTED: Danio rerio similar to Serine/threonine-protein kinase Nek1 (NimA-related protein kinase 1) (NY-REN-55 antigen) (LOC556002), mRNA Length = 3624 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgttttcatcctcatcctc 396 |||||||||||||||||||| Sbjct: 3476 atgttttcatcctcatcctc 3457
>gb|AC024198.7| Homo sapiens BAC clone RP11-777N19 from 4, complete sequence Length = 194702 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 atataattcagtcttcagagaaaa 112 |||||||||| ||||||||||||| Sbjct: 169344 atataattcattcttcagagaaaa 169321
>gb|AC158401.5| Mus musculus chromosome 7, clone RP23-84N6, complete sequence Length = 247769 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aataattatatttcttctat 90 |||||||||||||||||||| Sbjct: 130376 aataattatatttcttctat 130395
>gb|AC154190.2| Mus musculus BAC clone RP24-465P16 from chromosome 16, complete sequence Length = 150894 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 gagaccagagttccaggaataatt 77 ||||||||||||||||||| |||| Sbjct: 90582 gagaccagagttccaggaacaatt 90559
>ref|NM_078254.1| Caenorhabditis elegans TWiK family of potassium channels family member (twk-22) (twk-22) mRNA, complete cds Length = 2274 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ttttcatcctcatcctcttc 399 |||||||||||||||||||| Sbjct: 2261 ttttcatcctcatcctcttc 2242
>gb|AC087071.2|AC087071 Homo sapiens chromosome 7 clone RP11-775D22, complete sequence Length = 183353 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 taattcagtcttcagagaaaaaat 115 ||||||| |||||||||||||||| Sbjct: 141493 taattcactcttcagagaaaaaat 141470
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ataattatatttcttctata 91 |||||||||||||||||||| Sbjct: 24297204 ataattatatttcttctata 24297185
>gb|AC097473.3| Homo sapiens BAC clone RP11-75N20 from 4, complete sequence Length = 150573 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 atgaggtccctgaaaatgga 288 |||||||||||||||||||| Sbjct: 105291 atgaggtccctgaaaatgga 105310
>gb|AC017070.9| Homo sapiens BAC clone RP11-409F2 from 2, complete sequence Length = 150942 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 aggaataattatatttcttc 87 |||||||||||||||||||| Sbjct: 85106 aggaataattatatttcttc 85125
>gb|AF285860.1|AF285860 Wuchereria bancrofti 20/22kDa protein mRNA, complete cds Length = 558 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ttttcatcctcatcctcttc 399 |||||||||||||||||||| Sbjct: 278 ttttcatcctcatcctcttc 259
>gb|AF322393.1| Mus musculus excitatory amino acid carrier (Slc1a1) gene, partial cds, alternatively spliced Length = 25407 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 caatgaggtccctgaaaatg 286 |||||||||||||||||||| Sbjct: 18803 caatgaggtccctgaaaatg 18784
>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046B10 Length = 142596 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ataattatatttcttctata 91 |||||||||||||||||||| Sbjct: 121768 ataattatatttcttctata 121749
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ataattatatttcttctata 91 |||||||||||||||||||| Sbjct: 43108 ataattatatttcttctata 43089
>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0620H05 Length = 161808 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 cagggctaccccaatctctc 346 |||||||||||||||||||| Sbjct: 83572 cagggctaccccaatctctc 83591
>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585B01 Length = 133231 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ttcagtcttcagagaaaaaa 114 |||||||||||||||||||| Sbjct: 63481 ttcagtcttcagagaaaaaa 63462
>dbj|AK108836.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-G10, full insert sequence Length = 1127 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ttcagtcttcagagaaaaaa 114 |||||||||||||||||||| Sbjct: 1068 ttcagtcttcagagaaaaaa 1087
>emb|BX255904.6| Zebrafish DNA sequence from clone DKEY-15J16 in linkage group 20, complete sequence Length = 228691 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgttttcatcctcatcctc 396 |||||||||||||||||||| Sbjct: 34702 atgttttcatcctcatcctc 34683
>emb|CR388170.5| Zebrafish DNA sequence from clone CH211-87E4 in linkage group 20, complete sequence Length = 174079 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 atgttttcatcctcatcctc 396 |||||||||||||||||||| Sbjct: 137278 atgttttcatcctcatcctc 137297
>emb|BX276086.4| Zebrafish DNA sequence from clone CH211-114C9 in linkage group 20, complete sequence Length = 172431 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 atgttttcatcctcatcctc 396 |||||||||||||||||||| Sbjct: 37853 atgttttcatcctcatcctc 37834
>emb|CR760991.2| Xenopus tropicalis finished cDNA, clone TEgg055l14 Length = 1122 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ttttcatcctcatcctcttc 399 |||||||||||||||||||| Sbjct: 615 ttttcatcctcatcctcttc 596
>gb|U58859.1|BSU58859 Bacillus subtilis putative lipoprotein and cold shock protein CspB (cspB) genes, complete cds, and Orf1 gene, partial cds Length = 2200 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 gatattcagctgatcgctttttct 38 ||||||||||||||| |||||||| Sbjct: 1273 gatattcagctgatccctttttct 1250
>emb|AL928843.9| Zebrafish DNA sequence from clone DKEY-7P8 in linkage group 7, complete sequence Length = 179577 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 atataattcagtcttcagagaaaa 112 |||||||||||| ||||||||||| Sbjct: 2513 atataattcagtattcagagaaaa 2536
>gb|AC163287.4| Mus musculus BAC clone RP23-279E21 from chromosome 8, complete sequence Length = 201346 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 aatgaggtccctgaaaatgg 287 |||||||||||||||||||| Sbjct: 142636 aatgaggtccctgaaaatgg 142655 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,546,161 Number of Sequences: 3902068 Number of extensions: 5546161 Number of successful extensions: 98203 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97975 Number of HSP's gapped (non-prelim): 228 length of query: 439 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 417 effective length of database: 17,147,199,772 effective search space: 7150382304924 effective search space used: 7150382304924 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
