Clone Name | rbastl05h12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | GERXB_BACAN (Q9ZFB5) Spore germination protein XB | 28 | 7.7 |
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>GERXB_BACAN (Q9ZFB5) Spore germination protein XB| Length = 355 Score = 27.7 bits (60), Expect = 7.7 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 5/42 (11%) Frame = +3 Query: 156 GKNSIQHITGIVLP-----SLFCQLKD*SQRERSLLKPLAEH 266 G SI TGI+LP F + + ++ SLLKP+ EH Sbjct: 131 GVQSIALTTGILLPVVFLLGFFVMIANFPHKDYSLLKPIMEH 172 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,562,822 Number of Sequences: 219361 Number of extensions: 615589 Number of successful extensions: 1403 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1389 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1403 length of database: 80,573,946 effective HSP length: 75 effective length of database: 64,121,871 effective search space used: 1538924904 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)