>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece
          Length = 120562

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 1     aaaaagaaacaaatgacaacagcgttaatttgacaaagagcggatg 46
             ||||||||||||||| |||||| ||||  | |||||||||||||||
Sbjct: 40736 aaaaagaaacaaatgccaacagtgttagctcgacaaagagcggatg 40781

>ref|XM_626340.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_1130),
           partial mRNA
          Length = 2046

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 121 agctaattatctcaaatacattacaac 147
           |||||||||||||||||||||| ||||
Sbjct: 923 agctaattatctcaaatacatttcaac 949

>gb|AC040171.4| Homo sapiens chromosome 16 clone RP11-52D13, complete sequence
          Length = 151368

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 162   tacatgacaacatgtgatatacaaat 187
             ||||||||||||||||||| ||||||
Sbjct: 89296 tacatgacaacatgtgatagacaaat 89271

>gb|AC136506.10| Medicago truncatula clone mth2-33c8, complete sequence
          Length = 135457

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 46    gttgtgttcaaaataactaaa 66
             |||||||||||||||||||||
Sbjct: 92768 gttgtgttcaaaataactaaa 92788

>gb|AC112532.5| Rattus norvegicus 9 BAC CH230-20N15 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 138561

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     aaaaagaaacaaatgacaaca 21
             |||||||||||||||||||||
Sbjct: 22173 aaaaagaaacaaatgacaaca 22153

>emb|AL773538.7| Mouse DNA sequence from clone RP23-14I24 on chromosome 2, complete
             sequence
          Length = 178544

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 297   gtaagttgtaactattaaata 317
             |||||||||||||||||||||
Sbjct: 32643 gtaagttgtaactattaaata 32663

>gb|AC099576.12| Mus musculus chromosome 3, clone RP23-93G15, complete sequence
          Length = 156835

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aaagaaacaaatgacaacag 22
             ||||||||||||||||||||
Sbjct: 33791 aaagaaacaaatgacaacag 33810

>gb|AC171499.14| Medicago truncatula clone mth2-157b12, complete sequence
          Length = 81116

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    gatgttgtgttcaaaataac 62
             ||||||||||||||||||||
Sbjct: 75402 gatgttgtgttcaaaataac 75421

>gb|AC159238.2| Mus musculus BAC clone RP24-477O8 from chromosome 12, complete sequence
          Length = 176407

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    ttgatcatatatgctgactg 280
              ||||||||||||||||||||
Sbjct: 127799 ttgatcatatatgctgactg 127818

>gb|AC122887.2| Mus musculus BAC clone RP23-91L6 from 10, complete sequence
          Length = 186103

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 44    atgttgtgttcaaaataactaaag 67
             ||||| ||||||||||||||||||
Sbjct: 78671 atgttatgttcaaaataactaaag 78694

>emb|CR955009.1| Medicago truncatula chromosome 5 clone mth2-38i20, COMPLETE SEQUENCE
          Length = 123473

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 322  caaagatctacaaaggcatataac 345
            ||||| ||||||||||||||||||
Sbjct: 3883 caaagttctacaaaggcatataac 3860

>gb|AC121235.20| Medicago truncatula clone mth2-21k24, complete sequence
          Length = 116205

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   tcaaatacattacaacctag 151
             ||||||||||||||||||||
Sbjct: 29046 tcaaatacattacaacctag 29065

>gb|AC151740.21| Medicago truncatula clone mth2-82n16, complete sequence
          Length = 131700

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   caagttcatgtatgaacagc 123
             ||||||||||||||||||||
Sbjct: 72067 caagttcatgtatgaacagc 72086

>gb|AC146971.16| Medicago truncatula clone mth2-128d1, complete sequence
          Length = 125569

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 322    caaagatctacaaaggcatataac 345
              ||||| ||||||||||||||||||
Sbjct: 123297 caaagttctacaaaggcatataac 123274

>emb|BX908776.14| Zebrafish DNA sequence from clone DKEY-88E12 in linkage group 3, complete
              sequence
          Length = 249946

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    tacattacaacctagaacat 156
              ||||||||||||||||||||
Sbjct: 154372 tacattacaacctagaacat 154391

>gb|AC107626.2| Homo sapiens chromosome 3 clone RP11-1008M1, complete sequence
          Length = 179484

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    agttcatgtatgaacagcta 125
              ||||||||||||||||||||
Sbjct: 161081 agttcatgtatgaacagcta 161100

>dbj|AK157326.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830211E14 product:unclassifiable, full
           insert sequence
          Length = 1603

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 44  atgttgtgttcaaaataactaaag 67
           ||||| ||||||||||||||||||
Sbjct: 745 atgttatgttcaaaataactaaag 722

>emb|AL929327.5| Zebrafish DNA sequence from clone CH211-151O20, complete sequence
          Length = 145366

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   tacattacaacctagaacat 156
             ||||||||||||||||||||
Sbjct: 80096 tacattacaacctagaacat 80115

>dbj|AB019232.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIL23
          Length = 80818

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 288   aataccctcgtaagttgtaactat 311
             |||||||| |||||||||||||||
Sbjct: 63492 aatacccttgtaagttgtaactat 63515

>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     aaaataactaaagcgatttt 74
              ||||||||||||||||||||
Sbjct: 343794 aaaataactaaagcgatttt 343813

>gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 186915

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 44    atgttgtgttcaaaataactaaag 67
             ||||| ||||||||||||||||||
Sbjct: 17068 atgttatgttcaaaataactaaag 17045


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,237,558
Number of Sequences: 3902068
Number of extensions: 3237558
Number of successful extensions: 67025
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66968
Number of HSP's gapped (non-prelim): 57
length of query: 348
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 326
effective length of database: 17,147,199,772
effective search space: 5589987125672
effective search space used: 5589987125672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)