>gb|BT017729.1| Zea mays clone EL01N0447H11.c mRNA sequence
          Length = 981

 Score =  115 bits (58), Expect = 1e-22
 Identities = 82/90 (91%)
 Strand = Plus / Minus

                                                                       
Query: 279 tgtttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaacctctttgc 338
           ||||||||| |||||||||||||| |||| ||||||||| || |||||||||||||||||
Sbjct: 619 tgtttaccagtagtctttgcaagaacacacaccattttcgaagtggtggaacctctttgc 560

                                         
Query: 339 gtccctcgcaatgatctgacggccaacaag 368
            ||||| |||||||||||||| ||||||||
Sbjct: 559 atcccttgcaatgatctgacgtccaacaag 530

>gb|AY109701.1| Zea mays CL33539_1 mRNA sequence
          Length = 589

 Score =  115 bits (58), Expect = 1e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                       
Query: 279 tgtttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaacctctttgc 338
           ||||||||| |||||||||||||| |||| ||||||||| || |||||||||||||||||
Sbjct: 341 tgtttaccagtagtctttgcaagaacacacaccattttcgaagtggtggaacctctttgc 400

                                         
Query: 339 gtccctcgcaatgatctgacggccaacaag 368
            ||||| |||||||||||||| ||||||||
Sbjct: 401 atcccttgcaatgatctgacgtccaacaag 430

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                            
Query: 279      tgtttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaacctctttgc 338
                ||||||||||||||||||||||||||| | |||||| ||||||||||| || ||||||||
Sbjct: 30775678 tgtttaccaatagtctttgcaagagcatacaccattctcaaaatggtgaaatctctttgc 30775619

                                
Query: 339      gtccctcgcaatgatc 354
                 ||||| |||||||||
Sbjct: 30775618 atcccttgcaatgatc 30775603



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 204      taccttcaggatttacacaaccgattttggtt 235
                ||||||| |||||||||||||| ||| |||||
Sbjct: 30775749 taccttctggatttacacaacctattgtggtt 30775718

>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0021A09
          Length = 127973

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                         
Query: 279   tgtttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaacctctttgc 338
             ||||||||||||||||||||||||||| | |||||| ||||||||||| || ||||||||
Sbjct: 64953 tgtttaccaatagtctttgcaagagcatacaccattctcaaaatggtgaaatctctttgc 64894

                             
Query: 339   gtccctcgcaatgatc 354
              ||||| |||||||||
Sbjct: 64893 atcccttgcaatgatc 64878



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 204   taccttcaggatttacacaaccgattttggtt 235
             ||||||| |||||||||||||| ||| |||||
Sbjct: 65024 taccttctggatttacacaacctattgtggtt 64993

>dbj|AK072600.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130A18, full
            insert sequence
          Length = 2854

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                        
Query: 279  tgtttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaacctctttgc 338
            ||||||||||||||||||||||||||| | |||||| ||||||||||| || ||||||||
Sbjct: 2548 tgtttaccaatagtctttgcaagagcatacaccattctcaaaatggtgaaatctctttgc 2489

                            
Query: 339  gtccctcgcaatgatc 354
             ||||| |||||||||
Sbjct: 2488 atcccttgcaatgatc 2473



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 204  taccttcaggatttacacaaccgattttggtt 235
            ||||||| |||||||||||||| ||| |||||
Sbjct: 2619 taccttctggatttacacaacctattgtggtt 2588

>ref|NM_191124.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2391

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                        
Query: 282  ttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaacctctttgcgtc 341
            |||||||||||||||||||||||| | |||||| ||||||||||| || |||||||| ||
Sbjct: 2391 ttaccaatagtctttgcaagagcatacaccattctcaaaatggtgaaatctctttgcatc 2332

                         
Query: 342  cctcgcaatgatc 354
            ||| |||||||||
Sbjct: 2331 ccttgcaatgatc 2319

>gb|AC145331.19| Medicago truncatula clone mth2-8o7, complete sequence
          Length = 115348

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 282   ttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaa 329
             ||||||| ||||| | ||||||||||||||||| |  |||||||||||
Sbjct: 17180 ttaccaaaagtctctacaagagcacaaaccattcttgaaatggtggaa 17133

>gb|AC147471.14| Medicago truncatula clone mth2-7a7, complete sequence
          Length = 139792

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 282   ttaccaatagtctttgcaagagcacaaaccattttcaaaatggtggaa 329
             ||||||| ||||| | ||||||||||||||||| |  |||||||||||
Sbjct: 67915 ttaccaaaagtctctacaagagcacaaaccattcttgaaatggtggaa 67962

>gb|AC158193.2| Selaginella moellendorffii clone JGIASXY-5P19, complete sequence
          Length = 29585

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 284   accaatagtctttgcaagagca 305
             ||||||||||||||||||||||
Sbjct: 19307 accaatagtctttgcaagagca 19328

>gb|AY523969.1| Homo sapiens catenin (cadherin-associated protein), alpha-like 1
            (CTNNAL1) gene, complete cds
          Length = 74429

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 305  acaaaccattttcaaaatggt 325
            |||||||||||||||||||||
Sbjct: 6896 acaaaccattttcaaaatggt 6876

>emb|AL354797.16| Human DNA sequence from clone RP11-115J22 on chromosome 9q31.3-33.2
              Contains the 5' end of the IKBKAP gene encoding inhibitor
              of kappa light polypeptide gene enhancer in B-cells (kinase
              complex-associated protein (IKAP)), the C9orf6 gene for
              chromosome 9 open reading frame 6, the 5' end of the C9orf5
              gene for chromosome 9 open reading frame 5, the 3' end of
              the CTNNAL1 gene encoding Catenin (cadherin-associated
              protein) alpha-like 1, and two CpG islands, complete
              sequence
          Length = 188134

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 305    acaaaccattttcaaaatggt 325
              |||||||||||||||||||||
Sbjct: 104003 acaaaccattttcaaaatggt 104023

>gb|DQ214151.1| Taeniopygia guttata clone 0061P0030A03 NADH dehydrogenase
           (ubiquinone) 1 alpha subcomplex 5-like mRNA, complete
           sequence
          Length = 450

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 312 attttcaaaatggtggaacctctt 335
           ||||||||||||||| ||||||||
Sbjct: 371 attttcaaaatggtgtaacctctt 394

>ref|XM_518625.1| PREDICTED: Pan troglodytes zinc finger protein 292 (LOC462870), mRNA
          Length = 8202

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  agagcacaaaccattttcaa 319
            ||||||||||||||||||||
Sbjct: 3537 agagcacaaaccattttcaa 3518

>ref|XM_472789.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1272

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 304 cacaaaccattttcaaaatg 323
           ||||||||||||||||||||
Sbjct: 941 cacaaaccattttcaaaatg 922

>gb|AC110496.12| Mus musculus chromosome 7, clone RP23-56P3, complete sequence
          Length = 170784

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 99    aacaaattccagactagaacactaatag 126
             |||||||||| ||||||||||| |||||
Sbjct: 65528 aacaaattcctgactagaacaccaatag 65555

>gb|AC118476.15| Mus musculus chromosome 9, clone RP23-242K3, complete sequence
          Length = 197683

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   accattttcaaaatggtgga 328
             ||||||||||||||||||||
Sbjct: 88042 accattttcaaaatggtgga 88023

>gb|AC161037.3| Mus musculus chromosome 7, clone RP24-255H18, complete sequence
          Length = 184362

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 99    aacaaattccagactagaacactaatag 126
             |||||||||| ||||||||||| |||||
Sbjct: 13877 aacaaattcctgactagaacaccaatag 13850

>emb|AL139274.17| Human DNA sequence from clone RP11-393I2 on chromosome 6 Contains a
              reticulocalbin 1, EF-hand calcium binding domain (RCN1)
              pseudogene, a novel gene, a novel pseudogene, the gene for
              a novel zinc finger protein (C2H2 type) and 3 CpG islands,
              complete sequence
          Length = 163481

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 300    agagcacaaaccattttcaa 319
              ||||||||||||||||||||
Sbjct: 138629 agagcacaaaccattttcaa 138610

>gb|AC158232.2| Mus musculus BAC clone RP24-200M15 from chromosome 12, complete sequence
          Length = 187225

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    ttaaaccaaatgtttcatag 197
              ||||||||||||||||||||
Sbjct: 143215 ttaaaccaaatgtttcatag 143196

>gb|AC112651.4| Homo sapiens X BAC RP13-302M16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159274

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 243   tattaaatttgataacagtgtaga 266
             ||||||||||||||| ||||||||
Sbjct: 98787 tattaaatttgataatagtgtaga 98810

>dbj|AB204923.1| Gryllus bimaculatus satellite DNA, clone: pUGBH-27
          Length = 539

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  tttatgacatgtaacgaatt 61
           ||||||||||||||||||||
Sbjct: 208 tttatgacatgtaacgaatt 227

>dbj|AK127835.1| Homo sapiens cDNA FLJ45938 fis, clone PLACE7005169, moderately
            similar to Mus musculus zinc finger protein 292 (Zfp292)
          Length = 4050

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  agagcacaaaccattttcaa 319
            ||||||||||||||||||||
Sbjct: 3551 agagcacaaaccattttcaa 3532

>ref|XM_938563.1| PREDICTED: Homo sapiens zinc finger protein 292, transcript variant 4
            (ZNF292), mRNA
          Length = 10571

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  agagcacaaaccattttcaa 319
            ||||||||||||||||||||
Sbjct: 4768 agagcacaaaccattttcaa 4749

>ref|XM_048070.5| PREDICTED: Homo sapiens zinc finger protein 292, transcript variant 1
            (ZNF292), mRNA
          Length = 10571

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  agagcacaaaccattttcaa 319
            ||||||||||||||||||||
Sbjct: 4768 agagcacaaaccattttcaa 4749

>gb|BC016386.1|BC016386 Homo sapiens, clone IMAGE:4720111, mRNA
          Length = 1892

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 300 agagcacaaaccattttcaa 319
           ||||||||||||||||||||
Sbjct: 675 agagcacaaaccattttcaa 656

>gb|DQ311345.1| Bombyx mori chromatin modifying protein 1b mRNA, complete cds
          Length = 1634

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  aaacctgtggttaaaccaaa 187
            ||||||||||||||||||||
Sbjct: 1318 aaacctgtggttaaaccaaa 1299

>emb|BX649440.3| Zebrafish DNA sequence from clone CH211-198M12 in linkage group 3,
            complete sequence
          Length = 29954

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 14   gtgtatccatagtttgtatc 33
            ||||||||||||||||||||
Sbjct: 5522 gtgtatccatagtttgtatc 5541

>emb|BX470072.8| Zebrafish DNA sequence from clone DKEY-163I6 in linkage group 21,
              complete sequence
          Length = 211164

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 302    agcacaaaccattttcaaaatggt 325
              ||||||||||| ||||||||||||
Sbjct: 121521 agcacaaaccaatttcaaaatggt 121498

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 304      cacaaaccattttcaaaatg 323
                ||||||||||||||||||||
Sbjct: 23249683 cacaaaccattttcaaaatg 23249664

>emb|BX537746.1|HSM805829 Homo sapiens mRNA; cDNA DKFZp686P0262 (from clone DKFZp686P0262)
          Length = 7037

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  agagcacaaaccattttcaa 319
            ||||||||||||||||||||
Sbjct: 4773 agagcacaaaccattttcaa 4754

>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02,
             complete sequence
          Length = 121337

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   cacaaaccattttcaaaatg 323
             ||||||||||||||||||||
Sbjct: 87836 cacaaaccattttcaaaatg 87817

>emb|AL117187.7|CNS01DRD Human chromosome 14 DNA sequence BAC R-725G5 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 195835

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   tccttgacatgaaacctgtg 176
             ||||||||||||||||||||
Sbjct: 34187 tccttgacatgaaacctgtg 34168

>emb|AL683857.8| Mouse DNA sequence from clone RP23-46O18 on chromosome X, complete
             sequence
          Length = 238677

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   cacaaaccattttcaaaatg 323
             ||||||||||||||||||||
Sbjct: 54225 cacaaaccattttcaaaatg 54206

>gb|DQ063336.1| Alligator mississippiensis Chompy miniature inverted-repeat
           transposable element, partial sequence
          Length = 466

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 305 acaaaccattttcaaaatggtggaacct 332
           |||||||| ||| |||||||||||||||
Sbjct: 85  acaaaccaatttaaaaatggtggaacct 112

>emb|AL832366.1|HSM803674 Homo sapiens mRNA; cDNA DKFZp451P076 (from clone DKFZp451P076)
          Length = 4586

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  agagcacaaaccattttcaa 319
            ||||||||||||||||||||
Sbjct: 3069 agagcacaaaccattttcaa 3050

>dbj|AB011102.1| Homo sapiens mRNA for KIAA0530 protein, partial cds
          Length = 6578

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 300  agagcacaaaccattttcaa 319
            ||||||||||||||||||||
Sbjct: 1279 agagcacaaaccattttcaa 1260


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,344,060
Number of Sequences: 3902068
Number of extensions: 3344060
Number of successful extensions: 62044
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61950
Number of HSP's gapped (non-prelim): 94
length of query: 372
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 350
effective length of database: 17,147,199,772
effective search space: 6001519920200
effective search space used: 6001519920200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)