>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16,
              complete sequence
          Length = 170233

 Score =  264 bits (133), Expect = 2e-67
 Identities = 181/197 (91%)
 Strand = Plus / Plus

                                                                          
Query: 199    tttgcaaccgcctgcttctgtcgcttctcccatgctggcatcttgcctgggaacgcccat 258
              |||||||  ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 169007 tttgcaattgcctgtttctgacgcttctcccatgctggcatcttgcctgggaacgcccat 169066

                                                                          
Query: 259    cgcaaaaaccgctcccatccatagcaaccgcaaaacataagcatagcccaaagcagcagt 318
              ||||||| |||||||||||||||||| || ||||||||||| ||||||||||||| ||||
Sbjct: 169067 cgcaaaatccgctcccatccatagcagccacaaaacataaggatagcccaaagcatcagt 169126

                                                                          
Query: 319    ttgcccctcattccttctggcaagggctcgagcttcatgtagtcgttcagatccctgaac 378
              ||||||||||||||||| |||| ||| || |||||||||||||| || ||||||||||||
Sbjct: 169127 ttgcccctcattccttcaggcaggggttcaagcttcatgtagtcatttagatccctgaac 169186

                               
Query: 379    atatccgatgtgatcac 395
              ||||| |||||||||||
Sbjct: 169187 atatctgatgtgatcac 169203

>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score =  264 bits (133), Expect = 2e-67
 Identities = 181/197 (91%)
 Strand = Plus / Plus

                                                                         
Query: 199   tttgcaaccgcctgcttctgtcgcttctcccatgctggcatcttgcctgggaacgcccat 258
             |||||||  ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 66370 tttgcaattgcctgtttctgacgcttctcccatgctggcatcttgcctgggaacgcccat 66429

                                                                         
Query: 259   cgcaaaaaccgctcccatccatagcaaccgcaaaacataagcatagcccaaagcagcagt 318
             ||||||| |||||||||||||||||| || ||||||||||| ||||||||||||| ||||
Sbjct: 66430 cgcaaaatccgctcccatccatagcagccacaaaacataaggatagcccaaagcatcagt 66489

                                                                         
Query: 319   ttgcccctcattccttctggcaagggctcgagcttcatgtagtcgttcagatccctgaac 378
             ||||||||||||||||| |||| ||| || |||||||||||||| || ||||||||||||
Sbjct: 66490 ttgcccctcattccttcaggcaggggttcaagcttcatgtagtcatttagatccctgaac 66549

                              
Query: 379   atatccgatgtgatcac 395
             ||||| |||||||||||
Sbjct: 66550 atatctgatgtgatcac 66566

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  264 bits (133), Expect = 2e-67
 Identities = 181/197 (91%)
 Strand = Plus / Plus

                                                                            
Query: 199      tttgcaaccgcctgcttctgtcgcttctcccatgctggcatcttgcctgggaacgcccat 258
                |||||||  ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 19465658 tttgcaattgcctgtttctgacgcttctcccatgctggcatcttgcctgggaacgcccat 19465717

                                                                            
Query: 259      cgcaaaaaccgctcccatccatagcaaccgcaaaacataagcatagcccaaagcagcagt 318
                ||||||| |||||||||||||||||| || ||||||||||| ||||||||||||| ||||
Sbjct: 19465718 cgcaaaatccgctcccatccatagcagccacaaaacataaggatagcccaaagcatcagt 19465777

                                                                            
Query: 319      ttgcccctcattccttctggcaagggctcgagcttcatgtagtcgttcagatccctgaac 378
                ||||||||||||||||| |||| ||| || |||||||||||||| || ||||||||||||
Sbjct: 19465778 ttgcccctcattccttcaggcaggggttcaagcttcatgtagtcatttagatccctgaac 19465837

                                 
Query: 379      atatccgatgtgatcac 395
                ||||| |||||||||||
Sbjct: 19465838 atatctgatgtgatcac 19465854

>gb|AY110128.1| Zea mays CL23765_1 mRNA sequence
          Length = 703

 Score =  143 bits (72), Expect = 5e-31
 Identities = 165/196 (84%)
 Strand = Plus / Plus

                                                                       
Query: 200 ttgcaaccgcctgcttctgtcgcttctcccatgctggcatcttgcctgggaacgcccatc 259
           ||||||| ||||| ||||| ||||||||||| || || ||||| || |||||| ||||||
Sbjct: 191 ttgcaactgcctgtttctggcgcttctcccacgccggaatcttccccgggaacacccatc 250

                                                                       
Query: 260 gcaaaaaccgctcccatccatagcaaccgcaaaacataagcatagcccaaagcagcagtt 319
           |||  | |||||||||||| |||||||| |||||||| || |||||||| | || || ||
Sbjct: 251 gcaggagccgctcccatccgtagcaaccacaaaacattagaatagcccacaacatcaatt 310

                                                                       
Query: 320 tgcccctcattccttctggcaagggctcgagcttcatgtagtcgttcagatccctgaaca 379
           |||| | |||||| |||||||| || || || ||||||||||| |||| | |||||||||
Sbjct: 311 tgccacgcattccctctggcaaaggttcaagtttcatgtagtcattcaaacccctgaaca 370

                           
Query: 380 tatccgatgtgatcac 395
           |||| |||||||||||
Sbjct: 371 tatctgatgtgatcac 386

>emb|AL158053.14| Human DNA sequence from clone RP11-156J23 on chromosome Xq21.2-21.33
             Contains a discs, large homolog 7 (Drosophila) (DLG7)
             pseudogene, complete sequence
          Length = 177722

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 167   atgcaagatcctatgcctgctt 188
             ||||||||||||||||||||||
Sbjct: 13582 atgcaagatcctatgcctgctt 13603

>emb|CR626878.14| Zebrafish DNA sequence from clone DKEY-196H17 in linkage group 13,
              complete sequence
          Length = 201749

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 38     tcatgacaaaattcttcctaga 59
              ||||||||||||||||||||||
Sbjct: 177348 tcatgacaaaattcttcctaga 177327

>gb|AF148212.1| Clostridium thermocellum hydrogenase-1 (hydA) gene, partial cds
          Length = 2238

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 348  gagcttcatgtagtcgttcaga 369
            ||||||||||||||||||||||
Sbjct: 1160 gagcttcatgtagtcgttcaga 1181

>gb|AC010140.3|AC010140 Homo sapiens BAC clone RP11-218E11 from Y, complete sequence
          Length = 148342

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 167   atgcaagatcctatgcctgctt 188
             ||||||||||||||||||||||
Sbjct: 33124 atgcaagatcctatgcctgctt 33145

>emb|AL137220.8| Human DNA sequence from clone RP11-354I10 on chromosome 6 Contains a
             novel gene and a CpG island, complete sequence
          Length = 126482

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 228   ccatgctggcatcttgcctgg 248
             |||||||||||||||||||||
Sbjct: 78342 ccatgctggcatcttgcctgg 78322

>gb|AY692854.1| Saccharomyces cerevisiae clone FLH112778.01X YER165W gene, complete
           cds
          Length = 1734

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 aacataagcatagcccaaag 311
           ||||||||||||||||||||
Sbjct: 252 aacataagcatagcccaaag 233

>ref|XM_867055.1| PREDICTED: Bos taurus similar to Kinase-like domain containing
            soluble guanylyl cyclase (48 kDa chain) (KSGC)
            (LOC615290), mRNA
          Length = 1704

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 307  caaagcagcagtttgcccct 326
            ||||||||||||||||||||
Sbjct: 1078 caaagcagcagtttgcccct 1097

>emb|AL133512.10| Human DNA sequence from clone RP13-131O13 on chromosome Xq21.2-21.33,
             complete sequence
          Length = 165968

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    aaatcaacatcagtttacta 104
             ||||||||||||||||||||
Sbjct: 35468 aaatcaacatcagtttacta 35487

>gb|AC093637.5| Homo sapiens BAC clone RP11-239C17 from 4, complete sequence
          Length = 111211

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   aaccgcaaaacataagcata 303
             ||||||||||||||||||||
Sbjct: 53602 aaccgcaaaacataagcata 53583

>gb|AC006032.2|AC006032 Homo sapiens BAC clone RP11-115E20 from Y, complete sequence
          Length = 170282

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    aaatcaacatcagtttacta 104
             ||||||||||||||||||||
Sbjct: 86895 aaatcaacatcagtttacta 86914

>gb|U18922.1|SCE9163 Saccharomyces cerevisiae chromosome V cosmids 9163 and 9132
          Length = 64044

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 aacataagcatagcccaaag 311
           ||||||||||||||||||||
Sbjct: 975 aacataagcatagcccaaag 956

>emb|BX255926.10| Mouse DNA sequence from clone RP23-440M18 on chromosome 11, complete
             sequence
          Length = 73844

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   ttctcccatgctggcatctt 242
             ||||||||||||||||||||
Sbjct: 67418 ttctcccatgctggcatctt 67437

>gb|M12780.1|YSCPABPG Yeast (S.cerevisiae) polyadenylate-binding protein gene, complete cds
          Length = 3436

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 292  aacataagcatagcccaaag 311
            ||||||||||||||||||||
Sbjct: 1113 aacataagcatagcccaaag 1094

>gb|M13371.1|YSCMRNP Yeast (S.cerevisiae) poly (A)-binding protein gene, complete cds
          Length = 2167

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 aacataagcatagcccaaag 311
           ||||||||||||||||||||
Sbjct: 339 aacataagcatagcccaaag 320

>dbj|D00023.1|YSCPBP Saccharomyces cerevisiae gene for polyadenylate-binding protein,
           complete cds
          Length = 2167

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 292 aacataagcatagcccaaag 311
           ||||||||||||||||||||
Sbjct: 339 aacataagcatagcccaaag 320


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,861,181
Number of Sequences: 3902068
Number of extensions: 2861181
Number of successful extensions: 58091
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58049
Number of HSP's gapped (non-prelim): 42
length of query: 395
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 373
effective length of database: 17,147,199,772
effective search space: 6395905514956
effective search space used: 6395905514956
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)