>XYL1_ARATH (Q9S7Y7) Alpha-xylosidase precursor (EC 3.2.1.-)|
          Length = 915

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 18/36 (50%), Positives = 23/36 (63%)
 Frame = -1

Query: 299 GEEDAVEGEKRGVTMEVGGLELPLGKSFTMTWNMHI 192
           G ED  E E + V +EV GLE+ +GK F M+W M I
Sbjct: 881 GLED--EEENKSVMVEVRGLEMLVGKDFNMSWKMGI 914

>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response|
           factor 2) (ERF-2)
          Length = 492

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 223 FPSGNSSPPTSIVTPLFSPSTASSSPWCITCASAA 327
           FPSG+  PP  + +PL   S  S +P   +C+SA+
Sbjct: 263 FPSGHHQPPGGLESPLLLDSPTSRTPPPPSCSSAS 297

>FLBA_EMENI (P38093) Developmental regulator flbA|
          Length = 719

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +1

Query: 226 PSGNSSPPTSIV--TPLFSPSTASSSPWCITCASAAKK*GLDVATAVASSSAP 378
           P    SPP+S++   P   PS++S  P     A+AA      V  AV SSS+P
Sbjct: 9   PLSQGSPPSSLIDYQPQSVPSSSSPPPSTAAAAAAA------VVVAVPSSSSP 55

>CB024_RAT (Q6P7B2) Protein C2orf24 homolog|
          Length = 408

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +1

Query: 157 AEANAARFSYASMCMFHVMVKLFPSGNSSPPTSIVTP--LFSPSTASSSPWCITCASA 324
           A  ++   + ASM + H  + L  S + SPP   + P  L  P   +  P C+T  S+
Sbjct: 238 AYVSSVALAVASMAVIHQSLGLSSSPSPSPPELTLVPKNLLQPCIPAPVPQCLTNVSS 295

>SLIT1_HUMAN (O75093) Slit homolog 1 protein precursor (Slit-1) (Multiple|
           epidermal growth factor-like domains 4)
          Length = 1534

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 168 CSSILLCFDVHVPCHGEALPQRQLQPANLHRHAPLLALHGVLFSLVH 308
           C ++  C    V CHG  L   Q  P N+ R+   L L+G   + +H
Sbjct: 34  CPALCTCTGTTVDCHGTGL---QAIPKNIPRNTERLELNGNNITRIH 77

>SLIT1_RAT (O88279) Slit homolog 1 protein precursor (Slit-1) (Multiple|
           epidermal growth factor-like domains 4)
          Length = 1531

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 168 CSSILLCFDVHVPCHGEALPQRQLQPANLHRHAPLLALHGVLFSLVH 308
           C ++  C    V CHG  L   Q  P N+ R+   L L+G   + +H
Sbjct: 34  CPALCTCTGTTVDCHGTGL---QAIPKNIPRNTERLELNGNNITRIH 77

>SLIT1_MOUSE (Q80TR4) Slit homolog 1 protein precursor (Slit-1)|
          Length = 1531

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 168 CSSILLCFDVHVPCHGEALPQRQLQPANLHRHAPLLALHGVLFSLVH 308
           C ++  C    V CHG  L   Q  P N+ R+   L L+G   + +H
Sbjct: 34  CPALCTCTGTTVDCHGTGL---QAIPKNIPRNTERLELNGNNITRIH 77

>TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA box-binding|
           protein-associated factor 2S) (Transcription factor
           CA150)
          Length = 1098

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +1

Query: 148 QTEAEANAARFSYASM-CMFHVMVKLFPSGNSSPPTSIVTPLFSPSTASSSPWCITCASA 324
           Q +A+A A   + A +       V+    G S+P TS   P  S ST+SS+P   T  + 
Sbjct: 228 QAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTT 287

Query: 325 AKK*GLDVATAVASS 369
                   AT+VA +
Sbjct: 288 -------TATSVAQT 295

>OTX2_XENLA (Q91813) Homeobox protein OTX2 (XOTX2) (Orthodenticle 2)|
           (Orthodenticle-A-like protein)
          Length = 288

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 229 SGNSSPPTSIVTPLFSPSTASSSPW 303
           SG  SPP+S   P+ S STA  S W
Sbjct: 128 SGQFSPPSSTSVPVISSSTAPVSIW 152

>YBIB_ECOLI (P30177) Hypothetical protein ybiB|
          Length = 320

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 308 MHQGEEDAVEGEKRGVTMEVGGLELPLGKSFTMTWNMHI 192
           +H G+  A   E + V M VG    PL K   M W M +
Sbjct: 139 LHGGQAQAKLDEHQPVFMPVGAFCPPLEKQLAMRWRMGV 177

>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding|
           protein) (NRE-binding protein) (DBP-5) (Bax antagonist
           selected in saccharomyces 1) (BASS1)
          Length = 2426

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 22/85 (25%), Positives = 33/85 (38%)
 Frame = +3

Query: 48  HKLHNRLKHDELLFKLYKFKLDTTTTSRTKKAHADGSRGKCSSILLCFDVHVPCHGEALP 227
           HK H   K  +   K  K+K     +    K+H DG+    S   L FD         LP
Sbjct: 111 HKKHKNKKKKKKKEKEKKYKRQPEESESKTKSHDDGNIDLESDSFLKFDSEPSAVALELP 170

Query: 228 QRQLQPANLHRHAPLLALHGVLFSL 302
            R   P+  +  +P + L   + S+
Sbjct: 171 TRAFGPSETN-ESPAVVLEPPVVSM 194

>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor|
          Length = 374

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/49 (32%), Positives = 29/49 (59%)
 Frame = +1

Query: 229 SGNSSPPTSIVTPLFSPSTASSSPWCITCASAAKK*GLDVATAVASSSA 375
           S +SSP +S  T   SPS++SSS    + +S++       +++ +SSS+
Sbjct: 139 SSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 187

>DLDH_CANFA (P49819) Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC|
           1.8.1.4) (Dihydrolipoamide dehydrogenase)
          Length = 509

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
 Frame = +3

Query: 96  YKFKLDTTTTSRTKKAHA------DGSRGKCSSILLCFDVHVPCHG 215
           +KFKL+T  T  TKK+        +G+ G  + ++ C DV + C G
Sbjct: 270 FKFKLNTKVTGATKKSDGKIDVSIEGASGGKAEVITC-DVLLVCIG 314

>PCDH8_HUMAN (O95206) Protocadherin-8 precursor (Arcadlin)|
          Length = 1070

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 235 NSSPPTSIVTPLFSPSTASSSPWCITCASAA 327
           N + P   +TPL +P   ++SP+    A+AA
Sbjct: 348 NDNAPDIAITPLAAPGAPATSPFAAAAAAAA 378

>IF2_PORGI (Q7MXE4) Translation initiation factor IF-2|
          Length = 979

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
 Frame = -1

Query: 290 DAVEGEKRGVTMEVG--GLELPLGKSFT 213
           + +EGE  G+T  +G  GL+LP G+  T
Sbjct: 504 NVIEGEAGGITQHIGAYGLKLPSGRRIT 531

>PCSK4_RAT (Q78EH2) Proprotein convertase subtilisin/kexin type 4 precursor|
           (EC 3.4.21.-) (PC4) (Neuroendocrine convertase 3) (NEC
           3) (Prohormone convertase 3) (KEX2-like endoprotease 3)
          Length = 678

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +1

Query: 220 LFPS---GNSSPPTSIVTPLFSPSTASSSPWCITC 315
           LFP+   G++S P   ++PL +    S  PWC  C
Sbjct: 644 LFPAPHAGSASEPLQGLSPLAAILAISLGPWCCPC 678

>END3_YEAST (P39013) Protein END3|
          Length = 349

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +3

Query: 24  VFEGNQPPHKLHNRLKHDELLFKLYKFKLDTTTTSR 131
           +F G +P   + N++ HD++L  LY  KLD++  ++
Sbjct: 15  IFSGLKP---IENKVNHDQVLPILYNSKLDSSVLNK 47


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,122,012
Number of Sequences: 219361
Number of extensions: 612009
Number of successful extensions: 2758
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2746
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)