>NUD12_PONPY (Q5RD76) Peroxisomal NADH pyrophosphatase NUDT12 (EC 3.6.1.22)|
           (Nucleoside diphosphate-linked moiety X motif 12) (Nudix
           motif 12)
          Length = 462

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -3

Query: 161 YRPSLARVSPAVMVKLLHVDGIRCIL 84
           +  S  RV P V+++++H DG +C+L
Sbjct: 314 HNTSYPRVDPVVIMQVIHPDGTKCLL 339

>NUD12_MOUSE (Q9DCN1) Peroxisomal NADH pyrophosphatase NUDT12 (EC 3.6.1.22)|
           (Nucleoside diphosphate-linked moiety X motif 12) (Nudix
           motif 12)
          Length = 462

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -3

Query: 161 YRPSLARVSPAVMVKLLHVDGIRCIL 84
           +  S  RV P V+++++H DG +C+L
Sbjct: 314 HNTSYPRVDPVVIMQVIHPDGTKCLL 339

>NUD12_HUMAN (Q9BQG2) Peroxisomal NADH pyrophosphatase NUDT12 (EC 3.6.1.22)|
           (Nucleoside diphosphate-linked moiety X motif 12) (Nudix
           motif 12)
          Length = 462

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -3

Query: 161 YRPSLARVSPAVMVKLLHVDGIRCIL 84
           +  S  RV P V+++++H DG +C+L
Sbjct: 314 HNTSYPRVDPVVIMQVIHPDGTKCLL 339

>ESSC_STAAR (Q6GK24) Protein essC|
          Length = 1482

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +1

Query: 112  NSFTITAGLTLARLGRYDKESDYSKQTARLALCPHKTIGSSIIRLFD 252
            N   I +GL    +G +D+ES    +T   AL  HK      IR+ D
Sbjct: 1408 NIIIIASGLYSDTIGAFDRESKMMVRTINQALISHKISEQEFIRVKD 1454

>TXND2_MOUSE (Q6P902) Thioredoxin domain-containing protein 2|
           (Spermatid-specific thioredoxin-1) (Sptrx-1)
           (Thioredoxin-4)
          Length = 515

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = +1

Query: 43  TTQPVNNETTHQTHRIQRMPSTCNSFTITAGLTLARLGRYDKESDYSKQTARLALCPHKT 222
           +T   +  T H  H +   PS+ N  T      +++   Y K+++YS     LA   H  
Sbjct: 67  STPMFSENTVHPRHEVSPKPSSKN--TQLKQENISKSSGYSKQTNYSNTPKSLAKTTHPK 124

Query: 223 IGSSI 237
            GS++
Sbjct: 125 QGSTL 129

>FUSB_BURCE (P24127) Fusaric acid resistance protein fusB|
          Length = 142

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 236 SSGCSISWLLTSCWRAGCG 292
           SSGCS S    SCWR+ CG
Sbjct: 97  SSGCSRSSRSCSCWRSPCG 115

>IORB_BREDI (Q51698) Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16)|
          Length = 781

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = -3

Query: 173 DSLSYRPSLARVSPAVMVKLLHVDGIRCILC 81
           D+    PS+A VSP V V+ +H DGI  I+C
Sbjct: 41  DTAESTPSIAAVSPNVWVR-VHADGIVDIVC 70

>CAR3_DICDI (P35352) Cyclic AMP receptor 3 (cAMP receptor 3)|
          Length = 490

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 99  HTLYSMCLVGGLIVYRLCGLVAVINRV 19
           H  Y   L+  +IV+ LC + AVINR+
Sbjct: 212 HMTYQFKLINYIIVFLLCWVFAVINRI 238

>KIN4_YEAST (Q01919) Serine/threonine-protein kinase KIN4 (EC 2.7.11.1)|
          Length = 800

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 19  NSVYNRDKTTQPVNNETTHQTHRIQRMPSTCNSFTITAGLTLARLGR 159
           N V +RD+ +   NNE  H  H+ QR  +T   + I + L     G+
Sbjct: 13  NVVTDRDRHSLQRNNEILHPIHKNQRKHATFGPYIIGSTLGEGEFGK 59

>RGS11_HUMAN (O94810) Regulator of G-protein signaling 11 (RGS11)|
          Length = 467

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 229 YLLFCGDRAPNEPFVS 182
           YL FCG R P++P VS
Sbjct: 251 YLSFCGQRGPHDPLVS 266

>RF1_XYLFT (Q87A17) Peptide chain release factor 1 (RF-1)|
          Length = 361

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +1

Query: 79  THRIQRMPSTCNSFTI-TAGLTLARLGRYDKESDYSKQTARLALCPHKTIGS 231
           THR+QR+P+T +   I T+  T+A +   D+ +D S   A L +   ++ G+
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGA 232

>RF1_XYLFA (Q9PA71) Peptide chain release factor 1 (RF-1)|
          Length = 361

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +1

Query: 79  THRIQRMPSTCNSFTI-TAGLTLARLGRYDKESDYSKQTARLALCPHKTIGS 231
           THR+QR+P+T +   I T+  T+A +   D+ +D S   A L +   ++ G+
Sbjct: 181 THRVQRVPATESQGRIHTSAATVAIIPEADEIADISINPADLKIDTFRSSGA 232

>RASA2_MOUSE (P58069) Ras GTPase-activating protein 2 (GAP1m)|
          Length = 848

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = +1

Query: 31  NRDKTTQPVNNETTHQTHRIQRMPSTCNSFTITAGLTLARLGRYDKESDYSKQTARLALC 210
           + D+ T+ + +  T    ++Q+M  TC S  +  G          KE  YSK T   ++ 
Sbjct: 753 DEDRETERIYSIFTLSLLKLQKMEETCGSIAVYQG--------PQKEPGYSKFTIEDSVA 804

Query: 211 PHKTI 225
             KTI
Sbjct: 805 TFKTI 809


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,111,163
Number of Sequences: 219361
Number of extensions: 808580
Number of successful extensions: 1805
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)