>PTHY_CHICK (P15743) Parathyroid hormone precursor (PTH)|
          Length = 119

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = -1

Query: 382 HPMASRCWIGLHLQSHHSREEEAAARTVLPRAREVMLLGSRRQWSLLPR*LR 227
           H +  + W+ + LQ  HS  E+A  RT  PR +E ++LG  R   LLP  LR
Sbjct: 47  HTVERQDWLQMKLQDVHSALEDA--RTQRPRNKEDIVLGEIRNRRLLPEHLR 96

>SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7)|
            (Alanine--tRNA ligase) (AlaRS)
          Length = 1003

 Score = 33.9 bits (76), Expect = 0.098
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = -3

Query: 365  VLDWLTPSIAPXXXXXXXXXXXXXXXXGSDASRVKEAMELATQIASMKLS 216
            V +WLT ++ P                G+DAS+V+ A+++A+  ASMKL+
Sbjct: 954  VTEWLTTALGPLKGRCGKGKGGLASGQGTDASQVQAALDMASSFASMKLN 1003

>LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late envelope protein|
           18) (Small proline-rich-like epidermal differentiation
           complex protein 5A)
          Length = 118

 Score = 30.8 bits (68), Expect = 0.83
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
 Frame = -2

Query: 369 QGVGLAYTFNRTTQGKRRRRQERSCPGP-------GK*CFSGQGGNGACY 241
           +G G   + +R  Q  RRR Q  SC G        G  C    GG+G C+
Sbjct: 63  EGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCCH 112

>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (Ca(v)3.3)
          Length = 2223

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = -2

Query: 198 SSYILSGCLMVVLTLLSQIVMREHKIIHENQLEAVSIFTLQDVV*SSQLSCNYSLVYQME 19
           S ++++ CL+V+ T  S+   REH+++ E +   +S  T+      ++    Y  ++Q  
Sbjct: 386 SFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASY---AEPGDCYEEIFQYV 442

Query: 18  CYI*R 4
           C+I R
Sbjct: 443 CHILR 447

>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (CaVT.3)
          Length = 2201

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = -2

Query: 198 SSYILSGCLMVVLTLLSQIVMREHKIIHENQLEAVSIFTLQDVV*SSQLSCNYSLVYQME 19
           S ++++ CL+V+ T  S+   REH+++ E +   +S  T+      ++    Y  ++Q  
Sbjct: 384 SFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASY---AEPGDCYEEIFQYV 440

Query: 18  CYI*R 4
           C+I R
Sbjct: 441 CHILR 445

>STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1 antigen)|
          Length = 2570

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +3

Query: 174  SSHLICMKTSLN-KSAQLHRSYLGSKLHCLLDPRSITSLALGK 299
            S H  C+ T LN +  + H  Y+G  L CL +        LG+
Sbjct: 2145 SEHANCLSTGLNTRRCECHAGYVGDGLQCLEESEPPVDRCLGQ 2187

>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = -2

Query: 375  WLQGVGLAYTFNRTTQGKRRRRQERSCPG-PGK*CFSGQGGNGACYPDSFDEAEL 214
            WL   G+A   N T     +RRQ R   G PG+    G   + A  PD   + +L
Sbjct: 1316 WLTETGMALLRNLTMSPLHKRRQRRGRLGLPGEAGLEGSEPSDALGPDDKKDGDL 1370


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,973,794
Number of Sequences: 219361
Number of extensions: 1037128
Number of successful extensions: 2151
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2150
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)