>TF3C1_RAT (Q63505) General transcription factor 3C polypeptide 1|
           (Transcription factor IIIC-alpha subunit) (TF3C-alpha)
           (TFIIIC 220 kDa subunit) (TFIIIC220) (TFIIIC box
           B-binding subunit)
          Length = 2148

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +1

Query: 289 HSAACWSVGPGSSPHHH-PCSFSWQRSSQRP 378
           HS A    GPGS PHH  P    W+  +  P
Sbjct: 501 HSRASGDAGPGSRPHHSTPAKGGWKVLNLHP 531

>GLIS1_HUMAN (Q8NBF1) Zinc finger protein GLIS1 (GLI-similar 1)|
          Length = 620

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -1

Query: 315 SDAPAGCGVSNHLTPGLVSALTTYHSGHLTRSCLP 211
           SD   GCG+   L PG+     T H+G L    LP
Sbjct: 386 SDGKGGCGLGQELLPGVYPGSITPHNG-LASGLLP 419


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,140,175
Number of Sequences: 219361
Number of extensions: 976005
Number of successful extensions: 2393
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2393
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)