Clone Name | rbastl05f11 |
---|---|
Clone Library Name | barley_pub |
>ACROL_HUMAN (P58840) Hypothetical acrosin-like protease (EC 3.4.21.-)| (Fragment) Length = 232 Score = 30.8 bits (68), Expect = 0.83 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -1 Query: 294 PPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFLEGK 136 PP PSP+ PPP P + K LSF + RLQ L IE L+GK Sbjct: 166 PPPPSPLPPPPPPPPPTPSSTTKLPQGLSFAK----RLQQL-----IEVLKGK 209
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 30.8 bits (68), Expect = 0.83 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = -1 Query: 297 RPPLPSPMIQDP-PPQSSQPLAD*KKIPALSFF 202 +PP PSP P PP S P K IPA+ FF Sbjct: 97 KPPAPSPKPSPPKPPAPSPPKPQNKTIPAVFFF 129
>MUA3_CAEEL (P34576) Transmembrane cell adhesion receptor mua-3 precursor| (Muscle attachment abnormal protein 3) Length = 3767 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/50 (28%), Positives = 27/50 (54%) Frame = -3 Query: 166 QSVYRVLRGQESFGARVILSFLNSFVSGRSTPCYQKMIRECWPLFTCFNE 17 ++V + L G ++ G + + LN + R+ PC + +C P+ CF+E Sbjct: 589 ETVCKCLLGYKNVGTK---THLNCQMEKRANPCQDYSLHDCDPVAECFSE 635
>RT15_HUMAN (P82914) 28S ribosomal protein S15, mitochondrial precursor (S15mt)| (MRP-S15) Length = 257 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = -1 Query: 318 ASRAILLRPPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFLEG 139 A+R ++R P S + DPPP S L D + +P + ++ RL SL + E L+ Sbjct: 49 AARGYVVRKPAQSRLDDDPPP--STLLKDYQNVPGIEKVDDVVKRLLSLEMANKKEMLKI 106 Query: 138 KR 133 K+ Sbjct: 107 KQ 108
>PIP25_ARATH (Q9SV31) Probable aquaporin PIP2.5 (Plasma membrane intrinsic| protein 2d) (PIP2d) Length = 286 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -1 Query: 270 QDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFL 145 QDPPP+ PL D ++ SF+R LI+ + LY+ + Sbjct: 18 QDPPPE---PLFDATELGKWSFYRALIAEFIATLLFLYVTIM 56
>MATK_BRASY (Q9MUZ1) Maturase K (Intron maturase)| Length = 511 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 Query: 137 REFWCPRHSFIPKFICIWQKHSLLS 63 REF+CP+ IPKF + HS+ S Sbjct: 114 REFFCPKEKEIPKFQNLRSIHSIFS 138
>GALE_NEIGO (Q05026) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 338 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = -3 Query: 91 VSGRSTPCYQKMIRECWPLFTCFNEH 14 ++GR+ P YQ IR+C L F+EH Sbjct: 47 ITGRNIPFYQGDIRDCQILRQIFSEH 72
>TRMB_NITOC (Q3JCB2) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)| (tRNA(m7G46)-methyltransferase) Length = 236 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -3 Query: 136 ESFGARVILSFLNSFVSGRSTPCYQKMIRECWPLF 32 ESF R I SF+ GR TP +K + WP + Sbjct: 12 ESFQPRPITSFVRR--EGRMTPAQKKALEHLWPRY 44
>ACRO_RABIT (P48038) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light| chain; Acrosin heavy chain] Length = 431 Score = 28.1 bits (61), Expect = 5.4 Identities = 21/52 (40%), Positives = 24/52 (46%) Frame = -1 Query: 294 PPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFLEG 139 PP P P PPP P A K ALSF + RLQ L +E L+G Sbjct: 360 PPPPPPPPPPPPPPPPPPPASTKPPQALSFAK----RLQQL-----VEVLKG 402
>MTA1_SORMA (O42837) Mating type protein SmtA-1| Length = 306 Score = 27.7 bits (60), Expect = 7.0 Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = -1 Query: 318 ASRAIL-LRPPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLF 169 A AIL + PP P P+ Q P P S P A KK+ FR S L S F Sbjct: 22 AVNAILAMMPPGPGPVRQIPEPVSQAP-APKKKVNGFMGFRSYYSPLFSQF 71
>ACRO_HUMAN (P10323) Acrosin precursor (EC 3.4.21.10) [Contains: Acrosin light| chain; Acrosin heavy chain] Length = 421 Score = 27.7 bits (60), Expect = 7.0 Identities = 21/53 (39%), Positives = 25/53 (47%) Frame = -1 Query: 294 PPLPSPMIQDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFLEGK 136 PP SP+ PPP P + K LSF + RLQ L IE L+GK Sbjct: 355 PPPASPLPPPPPPPPPTPSSTTKLPQGLSFAK----RLQQL-----IEVLKGK 398
>CHKA_RAT (Q01134) Choline kinase alpha (EC 2.7.1.32) (CK) (CHETK-alpha)| Length = 453 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -1 Query: 315 SRAILLRPPLPSPMIQDPPPQSSQPLAD 232 S+ + L PP P P+ PPP S PLAD Sbjct: 51 SQPLALPPPPPPPLPLPPPP--SPPLAD 76
>MRP_AQUAE (O66946) Protein mrp homolog| Length = 364 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -1 Query: 270 QDPPPQSSQPLAD*KKIPAL 211 Q PPPQ+ QP+ KK+P + Sbjct: 92 QTPPPQTQQPMFTRKKVPGV 111
>INADL_HUMAN (Q8NI35) InaD-like protein (Inadl protein) (hINADL) (Pals1-associated| tight junction protein) (Protein associated to tight junctions) Length = 1801 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/42 (28%), Positives = 23/42 (54%) Frame = -1 Query: 228 KKIPALSFFRLLISRLQSLFFSLYIEFLEGKRVLVPASFFHS 103 K++P F+L +S+++ + + F + L PAS +HS Sbjct: 1365 KQLPESESFKLAVSQMKQQKYPTKVSFSSQEIPLAPASSYHS 1406
>PIP21_ARATH (P43286) Aquaporin PIP2.1 (Plasma membrane intrinsic protein 2a)| (PIP2a) Length = 287 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -1 Query: 270 QDPPPQSSQPLAD*KKIPALSFFRLLISRLQSLFFSLYIEFL 145 QDPPP P D ++ SF+R +I+ + LYI L Sbjct: 19 QDPPPA---PFIDGAELKKWSFYRAVIAEFVATLLFLYITVL 57
>MYST3_RAT (Q5TKR9) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) Length = 1998 Score = 27.3 bits (59), Expect = 9.2 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = -1 Query: 297 RPPLPSPMIQDPPPQSSQP 241 +PP P P Q PPP QP Sbjct: 1666 QPPPPQPQQQPPPPPQQQP 1684 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,858,195 Number of Sequences: 219361 Number of extensions: 630425 Number of successful extensions: 3221 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 2490 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3182 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)