>ref|XM_470859.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 7041

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 76/86 (88%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                        
Query: 196  gatggggcatggctacttg---atgatgatttggcgacatagatctgcttcatcctacca 252
            ||||||||||||| |||||   |||||||||| || ||||||||||||||||||||||||
Sbjct: 6893 gatggggcatggccacttgctgatgatgattttgcaacatagatctgcttcatcctacca 6834

                                      
Query: 253  gtgccatatttcttgtcggaaccgga 278
            |||||  | |||||||| ||||||||
Sbjct: 6833 gtgcccaagttcttgtcagaaccgga 6808

>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0004M10, complete sequence
          Length = 152423

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 76/86 (88%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                         
Query: 196   gatggggcatggctacttg---atgatgatttggcgacatagatctgcttcatcctacca 252
             ||||||||||||| |||||   |||||||||| || ||||||||||||||||||||||||
Sbjct: 66159 gatggggcatggccacttgctgatgatgattttgcaacatagatctgcttcatcctacca 66100

                                       
Query: 253   gtgccatatttcttgtcggaaccgga 278
             |||||  | |||||||| ||||||||
Sbjct: 66099 gtgcccaagttcttgtcagaaccgga 66074

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 76/86 (88%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                            
Query: 196      gatggggcatggctacttg---atgatgatttggcgacatagatctgcttcatcctacca 252
                ||||||||||||| |||||   |||||||||| || ||||||||||||||||||||||||
Sbjct: 15804359 gatggggcatggccacttgctgatgatgattttgcaacatagatctgcttcatcctacca 15804300

                                          
Query: 253      gtgccatatttcttgtcggaaccgga 278
                |||||  | |||||||| ||||||||
Sbjct: 15804299 gtgcccaagttcttgtcagaaccgga 15804274

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 76/86 (88%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                            
Query: 196      gatggggcatggctacttg---atgatgatttggcgacatagatctgcttcatcctacca 252
                ||||||||||||| |||||   |||||||||| || ||||||||||||||||||||||||
Sbjct: 15798893 gatggggcatggccacttgctgatgatgattttgcaacatagatctgcttcatcctacca 15798834

                                          
Query: 253      gtgccatatttcttgtcggaaccgga 278
                |||||  | |||||||| ||||||||
Sbjct: 15798833 gtgcccaagttcttgtcagaaccgga 15798808

>dbj|AK063311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-G03, full
            insert sequence
          Length = 2690

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 76/86 (88%), Gaps = 3/86 (3%)
 Strand = Plus / Minus

                                                                        
Query: 196  gatggggcatggctacttg---atgatgatttggcgacatagatctgcttcatcctacca 252
            ||||||||||||| |||||   |||||||||| || ||||||||||||||||||||||||
Sbjct: 2274 gatggggcatggccacttgctgatgatgattttgcaacatagatctgcttcatcctacca 2215

                                      
Query: 253  gtgccatatttcttgtcggaaccgga 278
            |||||  | |||||||| ||||||||
Sbjct: 2214 gtgcccaagttcttgtcagaaccgga 2189

>gb|BT018889.1| Zea mays clone EL01T0205H07.d mRNA sequence
          Length = 1720

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 232  tagatctgcttcatcctaccagtgcc 257
            ||||||||||||||||||||||||||
Sbjct: 1342 tagatctgcttcatcctaccagtgcc 1317

>gb|AY107502.1| Zea mays PCO085297 mRNA sequence
          Length = 504

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 232 tagatctgcttcatcctaccagtgcc 257
           ||||||||||||||||||||||||||
Sbjct: 392 tagatctgcttcatcctaccagtgcc 417

>gb|AC102944.2| Homo sapiens chromosome 8, clone CTD2-3082P9, complete sequence
          Length = 144383

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 241   ttcatcctaccagtgccatattt 263
             |||||||||||||||||||||||
Sbjct: 54567 ttcatcctaccagtgccatattt 54589

>gb|AC091560.6| Homo sapiens chromosome 8, clone RP11-104D16, complete sequence
          Length = 190283

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 241   ttcatcctaccagtgccatattt 263
             |||||||||||||||||||||||
Sbjct: 74312 ttcatcctaccagtgccatattt 74290

>emb|AL136363.4| Human DNA sequence from clone RP6-43L17 on chromosome Xq21.1-21.33,
            complete sequence
          Length = 93296

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 178  aatatctgctcttagcctgatgggg 202
            |||||||||||||||||| ||||||
Sbjct: 6927 aatatctgctcttagcctaatgggg 6951

>gb|AC145212.1| Homo sapiens BAC clone RP11-1368F8 from UL, complete sequence
          Length = 191469

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 32     aaaatttatccaggcatgacg 52
              |||||||||||||||||||||
Sbjct: 178606 aaaatttatccaggcatgacg 178586

>emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chromosome 21, complete
              sequence
          Length = 152296

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 32     aaaatttatccaggcatgacg 52
              |||||||||||||||||||||
Sbjct: 149462 aaaatttatccaggcatgacg 149442

>gb|AC093902.3| Homo sapiens BAC clone RP11-732B24 from 4, complete sequence
          Length = 179591

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 95    aatgaagcaacaataaataac 115
             |||||||||||||||||||||
Sbjct: 54848 aatgaagcaacaataaataac 54868

>gb|AC026881.6|AC026881 Homo sapiens chromosome 3 clone RP11-211B19 map 3p, complete sequence
          Length = 146022

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 181    atctgctcttagcctgatggg 201
              |||||||||||||||||||||
Sbjct: 117767 atctgctcttagcctgatggg 117747

>gb|AC024154.2|AC024154 Homo sapiens chromosome 3 clone RP11-487J12 map 3p, complete sequence
          Length = 204797

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 181   atctgctcttagcctgatggg 201
             |||||||||||||||||||||
Sbjct: 58058 atctgctcttagcctgatggg 58078

>gb|AC026179.5|AC026179 Homo sapiens chromosome 3 clone RP11-264H3 map 3p, complete sequence
          Length = 166488

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   atctgctcttagcctgatggg 201
             |||||||||||||||||||||
Sbjct: 52991 atctgctcttagcctgatggg 52971

>gb|AC138777.3| Homo sapiens BAC clone RP11-1220P14 from 2, complete sequence
          Length = 220281

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 32     aaaatttatccaggcatgacg 52
              |||||||||||||||||||||
Sbjct: 188469 aaaatttatccaggcatgacg 188449

>gb|AC148028.2| Homo sapiens chromosome UNKNOWN clone RP11-238G20, complete sequence
          Length = 172857

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 32     aaaatttatccaggcatgacg 52
              |||||||||||||||||||||
Sbjct: 172304 aaaatttatccaggcatgacg 172284

>emb|AL354822.8| Human DNA sequence from clone RP11-474C22 on chromosome 22, complete
              sequence
          Length = 161147

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 32     aaaatttatccaggcatgacg 52
              |||||||||||||||||||||
Sbjct: 160594 aaaatttatccaggcatgacg 160574

>emb|BX004987.9| Human DNA sequence from clone RP11-435B5 on chromosome 1, complete
              sequence
          Length = 201709

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 32     aaaatttatccaggcatgacg 52
              |||||||||||||||||||||
Sbjct: 188044 aaaatttatccaggcatgacg 188024

>gb|AC069277.6| Homo sapiens chromosome 3 clone RP11-529B17 map 3p, complete sequence
          Length = 159908

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 181    atctgctcttagcctgatggg 201
              |||||||||||||||||||||
Sbjct: 101052 atctgctcttagcctgatggg 101032

>gb|AC023485.6| Homo sapiens chromosome 3 clone RP11-489D19 map 3p, complete
           sequence
          Length = 179304

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 181 atctgctcttagcctgatggg 201
           |||||||||||||||||||||
Sbjct: 616 atctgctcttagcctgatggg 596

>ref|XM_630465.1| Dictyostelium discoideum hypothetical protein (DDB0189075), partial
           mRNA
          Length = 576

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 127 ataattaccaaataaaacat 146
           ||||||||||||||||||||
Sbjct: 108 ataattaccaaataaaacat 89

>emb|AL603793.4| Mouse DNA sequence from clone RP23-131A14 on chromosome 11, complete
              sequence
          Length = 201815

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     gaaaatgaagcaacaataaa 111
              ||||||||||||||||||||
Sbjct: 107099 gaaaatgaagcaacaataaa 107080

>gb|AC113188.6| Homo sapiens chromosome 8, clone CTD-2546M19, complete sequence
          Length = 194602

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   tctgctcttagcctgatggg 201
             ||||||||||||||||||||
Sbjct: 38050 tctgctcttagcctgatggg 38031

>gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map B68, complete
             sequence
          Length = 100745

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   attaccaaataaaacatgaa 149
             ||||||||||||||||||||
Sbjct: 62273 attaccaaataaaacatgaa 62254

>gb|AC160650.2| Pan troglodytes BAC clone CH251-548K10 from chromosome unknown,
             complete sequence
          Length = 184125

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   tctgctcttagcctgatggg 201
             ||||||||||||||||||||
Sbjct: 52331 tctgctcttagcctgatggg 52312

>gb|AC068781.19| Homo sapiens 3 BAC RP11-457K10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 197893

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 217   gatgatttggcgacatagatctgc 240
             |||||||||||||||||| |||||
Sbjct: 12166 gatgatttggcgacatagctctgc 12189

>gb|AC163744.3| Pan troglodytes BAC clone CH251-376E11 from chromosome unknown,
             complete sequence
          Length = 195342

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   tctgctcttagcctgatggg 201
             ||||||||||||||||||||
Sbjct: 54303 tctgctcttagcctgatggg 54322

>gb|AC175061.3| Pan troglodytes BAC clone CH251-572M8 from chromosome unknown, complete
              sequence
          Length = 191409

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    tctgctcttagcctgatggg 201
              ||||||||||||||||||||
Sbjct: 152818 tctgctcttagcctgatggg 152799

>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
              sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    gaaaattgagccgaaagaat 180
              ||||||||||||||||||||
Sbjct: 876813 gaaaattgagccgaaagaat 876832

>emb|BX572624.15| Mouse DNA sequence from clone RP23-21G15 on chromosome 4, complete
             sequence
          Length = 20631

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 131   ttaccaaataaaacatgaatctca 154
             |||||||| |||||||||||||||
Sbjct: 18525 ttaccaaagaaaacatgaatctca 18502

>gb|AC002464.1|AC002464 Human BAC clone CTA-331P3, complete sequence
          Length = 123805

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    gacgccatattgcttcaaag 68
             ||||||||||||||||||||
Sbjct: 77497 gacgccatattgcttcaaag 77478

>gb|AF143504.1|AF143504 Leptospira interrogans Hsa protein (hsa), ECF-like sigma factor SigE
            (sigE), DshA protein (dshA), and DshB protein (dshB)
            genes, complete cds
          Length = 3659

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  gaaaattgagccgaaagaat 180
            ||||||||||||||||||||
Sbjct: 3178 gaaaattgagccgaaagaat 3197

>emb|CR354403.16| Zebrafish DNA sequence from clone CH211-196E8 in linkage group 9,
              complete sequence
          Length = 167419

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    ggcacatgctataattacca 136
              ||||||||||||||||||||
Sbjct: 153853 ggcacatgctataattacca 153834

>dbj|AP004295.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1907E5
          Length = 154597

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    tctgctcttagcctgatggg 201
              ||||||||||||||||||||
Sbjct: 127928 tctgctcttagcctgatggg 127909


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,380,023
Number of Sequences: 3902068
Number of extensions: 3380023
Number of successful extensions: 75858
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75738
Number of HSP's gapped (non-prelim): 115
length of query: 327
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 305
effective length of database: 17,147,199,772
effective search space: 5229895930460
effective search space used: 5229895930460
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)