>gb|AC134468.4| Mus musculus BAC clone RP23-97J21 from chromosome 12, complete sequence
          Length = 234400

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 360    cagggcttcaacacaactttt 380
              |||||||||||||||||||||
Sbjct: 195829 cagggcttcaacacaactttt 195849

>gb|AC126268.3| Mus musculus BAC clone RP23-227O11 from chromosome 12, complete sequence
          Length = 201581

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 360    cagggcttcaacacaactttt 380
              |||||||||||||||||||||
Sbjct: 181774 cagggcttcaacacaactttt 181754

>gb|AC131121.4| Mus musculus BAC clone RP24-550I15 from 1, complete sequence
          Length = 127312

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 163   actaaatacaaggctctgaag 183
             |||||||||||||||||||||
Sbjct: 36516 actaaatacaaggctctgaag 36536

>emb|AL671011.9| Mouse DNA sequence from clone RP23-95O23 on chromosome 4, complete
              sequence
          Length = 226950

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 288    gagggcaggagattcacccag 308
              |||||||||||||||||||||
Sbjct: 138411 gagggcaggagattcacccag 138391

>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    aaagctttccgaagcaaccc 214
              ||||||||||||||||||||
Sbjct: 904388 aaagctttccgaagcaaccc 904369

>gb|AC108433.9| Mus musculus chromosome 18, clone RP23-194M19, complete sequence
          Length = 188997

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   agccatgggttgatgacccc 348
             ||||||||||||||||||||
Sbjct: 86929 agccatgggttgatgacccc 86910

>ref|XM_712555.1| Candida albicans SC5314 transketolase 1 (CaO19_5112), mRNA
          Length = 2034

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 66   cttcaacagacaagataggaacac 89
            |||||||||||||||| |||||||
Sbjct: 1840 cttcaacagacaagattggaacac 1817

>ref|XM_712481.1| Candida albicans SC5314 hypothetical protein (CaO19_12578), mRNA
          Length = 2034

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 66   cttcaacagacaagataggaacac 89
            |||||||||||||||| |||||||
Sbjct: 1840 cttcaacagacaagattggaacac 1817

>gb|U50072.1| Caenorhabditis elegans cosmid K06B9, complete sequence
          Length = 31737

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    tcttatgattggtacaacaa 29
             ||||||||||||||||||||
Sbjct: 11337 tcttatgattggtacaacaa 11356

>ref|XM_795237.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC585316 (LOC585316), mRNA
          Length = 3270

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 328  aagccatgggttgatgaccc 347
            ||||||||||||||||||||
Sbjct: 1673 aagccatgggttgatgaccc 1654

>emb|AL033501.1|CAC41C10 C.albicans cosmid Ca41C10
          Length = 38874

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 66    cttcaacagacaagataggaacac 89
             |||||||||||||||| |||||||
Sbjct: 13155 cttcaacagacaagattggaacac 13178

>emb|AL589722.17| Mouse DNA sequence from clone RP23-169M24 on chromosome 13 Contains the
             gene for a novel protein similar to ribosomal protein S8
             (Rps8) and a CpG island, complete sequence
          Length = 200125

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   actttttccaggcatgatcc 394
             ||||||||||||||||||||
Sbjct: 27350 actttttccaggcatgatcc 27331

>gb|AC163387.2| Mus musculus chromosome 1, clone RP24-181G14, complete sequence
          Length = 194188

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    caggcttcaacagacaagat 81
             ||||||||||||||||||||
Sbjct: 16680 caggcttcaacagacaagat 16661

>ref|XM_688640.1| PREDICTED: Danio rerio similar to CG7818-PA (LOC573446), mRNA
          Length = 1685

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 cagtaaagatgaacaaaaag 243
           ||||||||||||||||||||
Sbjct: 195 cagtaaagatgaacaaaaag 214

>gb|AC161881.3| Mus musculus BAC clone RP23-200C1 from chromosome 13, complete sequence
          Length = 176749

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 375    actttttccaggcatgatcc 394
              ||||||||||||||||||||
Sbjct: 170085 actttttccaggcatgatcc 170066

>ref|NM_068111.1| Caenorhabditis elegans CYtochrome P450 family member (cyp-25A6)
           (cyp-25A6) mRNA, complete cds
          Length = 753

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 10  tcttatgattggtacaacaa 29
           ||||||||||||||||||||
Sbjct: 187 tcttatgattggtacaacaa 206

>emb|BX119979.9| Zebrafish DNA sequence from clone CH211-201G8 in linkage group 1,
              complete sequence
          Length = 194023

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    cagtaaagatgaacaaaaag 243
              ||||||||||||||||||||
Sbjct: 183889 cagtaaagatgaacaaaaag 183870

>emb|BX005024.13| Zebrafish DNA sequence from clone DKEY-211F1, complete sequence
          Length = 171527

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   cagtaaagatgaacaaaaag 243
             ||||||||||||||||||||
Sbjct: 14429 cagtaaagatgaacaaaaag 14448

>ref|NM_207071.1| Danio rerio zgc:77296 (zgc:77296), mRNA
          Length = 1730

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 cagtaaagatgaacaaaaag 243
           ||||||||||||||||||||
Sbjct: 200 cagtaaagatgaacaaaaag 219

>gb|AC105109.10| Homo sapiens chromosome 15, clone CTD-2343P13, complete sequence
          Length = 76158

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aatattaactcttatgattg 20
             ||||||||||||||||||||
Sbjct: 39216 aatattaactcttatgattg 39197

>gb|AC104020.10| Homo sapiens chromosome 15, clone RP11-369K8, complete sequence
          Length = 171307

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aatattaactcttatgattg 20
              ||||||||||||||||||||
Sbjct: 166026 aatattaactcttatgattg 166007

>gb|BC066377.1| Danio rerio zgc:77296, mRNA (cDNA clone MGC:77296 IMAGE:6965715),
           complete cds
          Length = 1730

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 cagtaaagatgaacaaaaag 243
           ||||||||||||||||||||
Sbjct: 200 cagtaaagatgaacaaaaag 219

>emb|Z66495.2|CEC36A4 Caenorhabditis elegans Cosmid C36A4, complete sequence
          Length = 40146

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    tcttatgattggtacaacaa 29
             ||||||||||||||||||||
Sbjct: 10654 tcttatgattggtacaacaa 10635

>gb|AC102209.11| Mus musculus chromosome 3, clone RP24-280F5, complete sequence
          Length = 170723

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    acactatacgttataacaca 105
             ||||||||||||||||||||
Sbjct: 88634 acactatacgttataacaca 88615

>emb|BX511083.17| Zebrafish DNA sequence from clone CH211-195F22 in linkage group 1,
              complete sequence
          Length = 211668

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    cagtaaagatgaacaaaaag 243
              ||||||||||||||||||||
Sbjct: 204848 cagtaaagatgaacaaaaag 204829

>emb|AL606742.11| Mouse DNA sequence from clone RP23-70A7 on chromosome 3, complete
             sequence
          Length = 186559

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    acactatacgttataacaca 105
             ||||||||||||||||||||
Sbjct: 15524 acactatacgttataacaca 15543

>gb|AC161443.14| Mus musculus chromosome 1, clone RP23-404K2, complete sequence
          Length = 186144

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    caggcttcaacagacaagat 81
             ||||||||||||||||||||
Sbjct: 41076 caggcttcaacagacaagat 41095


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,300,317
Number of Sequences: 3902068
Number of extensions: 3300317
Number of successful extensions: 57749
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57706
Number of HSP's gapped (non-prelim): 43
length of query: 400
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 378
effective length of database: 17,147,199,772
effective search space: 6481641513816
effective search space used: 6481641513816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)