Clone Name | rbastl05f01 |
---|---|
Clone Library Name | barley_pub |
>Y036_HAEIN (Q57335) Hypothetical ABC transporter ATP-binding protein HI0036| Length = 592 Score = 31.2 bits (69), Expect = 0.62 Identities = 15/62 (24%), Positives = 31/62 (50%) Frame = +2 Query: 32 IWNQRNVRVVQNLWFFRVVLLLIMYCWSKEFWLHNPAMICPKRYTTSSPPLYVSTLIYRS 211 IW + + + ++ F + LL+ W K+FW+ + PKR + P L+ ++ + Sbjct: 12 IWILQTLAITSVVFSFGIFLLVRFTQWGKQFWMFAGGYLSPKR--SIKPILFFLLIVAMT 69 Query: 212 IL 217 +L Sbjct: 70 LL 71
>IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2)| Length = 1338 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/32 (53%), Positives = 20/32 (62%) Frame = -3 Query: 113 SSSTLLAAGQPEKTRGFGRP*HSSDSRCSSIL 18 SSS+LL+A P + G G P SSDSR S L Sbjct: 944 SSSSLLSASSPASSLGSGTPGTSSDSRQRSPL 975
>IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS)| Length = 1321 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/32 (53%), Positives = 20/32 (62%) Frame = -3 Query: 113 SSSTLLAAGQPEKTRGFGRP*HSSDSRCSSIL 18 SSS+LL+A P + G G P SSDSR S L Sbjct: 936 SSSSLLSASSPASSLGSGTPGTSSDSRQRSPL 967
>CLPB2_ANASP (Q8YM56) Chaperone clpB 2| Length = 872 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -2 Query: 399 ILRGEFKDEDSISVDTQVTVPSNGQLP 319 ILRGEF D D+I VD Q S +LP Sbjct: 840 ILRGEFNDGDTIFVDVQNERLSFSRLP 866
>FBLN1_CERAE (Q8MJJ9) Fibulin-1 (Fragment)| Length = 598 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%) Frame = -1 Query: 400 YPQRRVQ--GRGQHLRRHSGDGAVERTAPPAEAC 305 Y Q+ V GRG HL V APPAE C Sbjct: 249 YTQKNVPNCGRGYHLNEEGTRCDVNECAPPAEPC 282
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 9/60 (15%) Frame = -1 Query: 397 PQRRVQGRGQHLRRHSGDGAVERTAPPAEACLPEDERG---------IQAGCCSRREVPA 245 P+ R +GRG L + G R+AP A + L + RG + G RE PA Sbjct: 739 PRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAELRGKTRSLGRAEVALGAQGPREKPA 798
>PANE1_MOUSE (Q9CQA0) Proliferation-associated nuclear element protein 1| Length = 180 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/63 (26%), Positives = 32/63 (50%) Frame = -2 Query: 399 ILRGEFKDEDSISVDTQVTVPSNGQLPQQKLVFRKMNEESKPAAAQDEKFLPTV*CSIFL 220 +L+ + E + + + +PSN P+ L+ +N SK + + E+FL V S FL Sbjct: 35 MLKDDCASELRVHLANSLPLPSNVNRPRIDLIVFVINLHSKYSLQKVEEFLQHVDSSFFL 94 Query: 219 QRI 211 ++ Sbjct: 95 GKV 97
>BGAL_SULSH (P50388) Beta-galactosidase (EC 3.2.1.23) (Lactase)| Length = 489 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +2 Query: 83 VVLLLIMYCWSKEFWLHNPAMICPKRYTTSSPPLYVST 196 + +L MY W WLH+P + +R S P ++ST Sbjct: 142 IYFILNMYHWPLPLWLHDPIRV--RRGDLSGPTGWLST 177
>ORYB_ORYSA (P25777) Oryzain beta chain precursor (EC 3.4.22.-)| Length = 471 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = +2 Query: 251 NFSS*AAAGLDSSFIFRKTSFCWGSCPFDG 340 NFS A + +F FR WG CP +G Sbjct: 388 NFSCPAGSTCCCAFGFRNLCLVWGCCPVEG 417
>FA54A_HUMAN (Q6P444) Protein FAM54A (DUF729 domain containing protein 1)| Length = 385 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +1 Query: 250 ELLVLSSSRLGFLVHLPEDKLLLGELSVRRHRHLSVDGD 366 E+ L +S L ++++ LG+LS R HLSVD D Sbjct: 161 EMQELKNSTNSSSFGLSDERISLGQLSSSRAAHLSVDPD 199 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,924,556 Number of Sequences: 219361 Number of extensions: 1130109 Number of successful extensions: 3026 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2951 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3026 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)