ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl05e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ234648.1|HVU234648 Hordeum vulgare genomic DNA fragment; c... 52 0.001
2emb|CR407546.16| Zebrafish DNA sequence from clone CH211-276E3 i... 42 1.3
3gb|AC122030.3| Mus musculus BAC clone RP24-401B24 from chromosom... 42 1.3
4emb|AL031294.1|HS885E17 Human DNA sequence from clone RP5-885E17... 42 1.3
5emb|AL590149.9| Zebrafish DNA sequence from clone RP71-36D5 in l... 42 1.3
6emb|BX664744.10| Zebrafish DNA sequence from clone CH211-226F3 i... 42 1.3
7emb|BX511266.14| Zebrafish DNA sequence from clone CH211-245D7 i... 42 1.3
8emb|CR394529.7| Zebrafish DNA sequence from clone CH211-121F17 i... 42 1.3
9emb|CR626864.10| Zebrafish DNA sequence from clone DKEY-156N14 i... 42 1.3
10emb|CR405703.5| Zebrafish DNA sequence from clone DKEYP-52E4 in ... 42 1.3
11emb|BX511253.13| Zebrafish DNA sequence from clone DKEY-45M5 in ... 42 1.3
12gb|AC020703.7| Homo sapiens BAC clone RP11-259G7 from 4, complet... 42 1.3
13emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, c... 42 1.3
14emb|BX324110.10| Zebrafish DNA sequence from clone DKEY-250F19 i... 42 1.3
15emb|BX324146.10| Zebrafish DNA sequence from clone CH211-207C15 ... 42 1.3
16emb|BX284110.16| Zebrafish DNA sequence from clone DKEYP-67D7 in... 42 1.3
17emb|BX088528.7| Zebrafish DNA sequence from clone CH211-226D23 i... 42 1.3
18emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in ... 42 1.3
19emb|AL954634.12| Zebrafish DNA sequence from clone DKEY-58C20 in... 42 1.3
20emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 i... 42 1.3
21gb|AC115029.12| Mus musculus chromosome 3, clone RP24-248I17, co... 42 1.3
22emb|AL953910.14| Zebrafish DNA sequence from clone DKEY-31E10 in... 42 1.3
23emb|BX004829.12| Zebrafish DNA sequence from clone DKEY-29O15, c... 42 1.3
24emb|AL929299.10| Zebrafish DNA sequence from clone BUSM1-SL6, co... 42 1.3
25emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, co... 42 1.3
26emb|AL935277.6| Zebrafish DNA sequence from clone CH211-250C16, ... 42 1.3
27gb|AY229987.1| Cryptophlebia leucotreta granulovirus isolate CV3... 40 5.0
28emb|BX908777.15| Zebrafish DNA sequence from clone CH211-133H13 ... 40 5.0
29emb|CR387983.8| Zebrafish DNA sequence from clone DKEY-90D6 in l... 40 5.0
30gb|AC121933.3| Mus musculus BAC clone RP24-206I11 from chromosom... 40 5.0
31gb|AC122436.4| Mus musculus BAC clone RP24-204P6 from chromosome... 40 5.0
32emb|CR848031.5| Zebrafish DNA sequence from clone DKEY-288I10 in... 40 5.0
33emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 i... 40 5.0
34gb|AC128685.11| Homo sapiens 3 BAC RP11-535I24 (Roswell Park Can... 40 5.0
35emb|CR376827.6| Zebrafish DNA sequence from clone CH211-154C21 i... 40 5.0
36emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in... 40 5.0
37emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4,... 40 5.0
38emb|CR550304.13| Zebrafish DNA sequence from clone CH211-150I13 ... 40 5.0
39emb|CR589884.15| Zebrafish DNA sequence from clone CH211-206L14 ... 40 5.0
40emb|CR847504.13| Zebrafish DNA sequence from clone DKEYP-51G9 in... 40 5.0
41emb|CR384103.7| Zebrafish DNA sequence from clone DKEY-215K6 in ... 40 5.0
42emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in... 40 5.0
43emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in l... 40 5.0
44emb|BX957239.7| Zebrafish DNA sequence from clone DKEY-173N20 in... 40 5.0
45emb|CR450725.6| Zebrafish DNA sequence from clone CH211-5A14 in ... 40 5.0
46emb|BX890597.13| Zebrafish DNA sequence from clone DKEY-65F8, co... 40 5.0
47emb|AL935031.12| Zebrafish DNA sequence from clone CH211-93I23, ... 40 5.0
48gb|AC107072.3| Homo sapiens BAC clone RP11-359D14 from 4, comple... 40 5.0
49emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in ... 40 5.0
50emb|BX005140.18| Zebrafish DNA sequence from clone CH211-11F22, ... 40 5.0
51gb|AC092629.2| Homo sapiens BAC clone RP11-280J8 from 4, complet... 40 5.0
52emb|BX511229.6| Zebrafish DNA sequence from clone CH211-194H2 in... 40 5.0
53emb|BX323874.4| Zebrafish DNA sequence from clone DKEY-104N21 in... 40 5.0
54emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in ... 40 5.0
55emb|BX571853.4| Zebrafish DNA sequence from clone DKEY-29H14 in ... 40 5.0
56dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
57dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
58emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in... 40 5.0
59emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in ... 40 5.0
60emb|BX649448.10| Zebrafish DNA sequence from clone DKEY-169I5 in... 40 5.0
61emb|BX323807.8| Zebrafish DNA sequence from clone DKEY-154P10 in... 40 5.0
62emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 i... 40 5.0
63dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
64emb|BX005267.7| Zebrafish DNA sequence from clone DKEY-46K2 in l... 40 5.0
65emb|AL845168.5| Zebrafish DNA sequence from clone DKEY-91M11, co... 40 5.0
66emb|CT967325.1| Zebrafish DNA sequence from clone DKEY-25K11, co... 40 5.0
67emb|CR556723.6| Zebrafish DNA sequence from clone CH211-176K6 in... 40 5.0
68emb|CR382336.11| Zebrafish DNA sequence from clone CH211-125A6 i... 40 5.0
69emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in ... 40 5.0
70emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in... 40 5.0
71emb|BX000529.13| Zebrafish DNA sequence from clone DKEY-191N2 in... 40 5.0
72emb|BX004834.13| Zebrafish DNA sequence from clone CH211-42E22 i... 40 5.0
73emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in... 40 5.0
74emb|BX119962.3| Zebrafish DNA sequence from clone CH211-203L9 in... 40 5.0
75emb|CR749179.8| Zebrafish DNA sequence from clone DKEY-33A13 in ... 40 5.0
76emb|CR318629.4| Zebrafish DNA sequence from clone DKEY-30I24 in ... 40 5.0
77emb|BX004853.7| Zebrafish DNA sequence from clone DKEY-13O11, co... 40 5.0
78emb|BX001004.11| Zebrafish DNA sequence from clone DKEY-30N2 in ... 40 5.0
79emb|CR555293.8| Zebrafish DNA sequence from clone DKEY-23P14 in ... 40 5.0
80emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in... 40 5.0
81emb|CR925805.14| Zebrafish DNA sequence from clone DKEY-99N20 in... 40 5.0
82emb|CR759813.6| Zebrafish DNA sequence from clone DKEY-150H10 in... 40 5.0
83emb|AL954327.12| Zebrafish DNA sequence from clone DKEY-18H14 in... 40 5.0
84emb|BX005063.7| Zebrafish DNA sequence from clone CH211-101D12, ... 40 5.0
85emb|AL928828.6| Zebrafish DNA sequence from clone CH211-30I2, co... 40 5.0 
>emb|AJ234648.1|HVU234648 Hordeum vulgare genomic DNA fragment; clone MWG0922.uni
          Length = 373

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 1   gaactaaattctttattcccaaggtcaagggtga 34
           |||||||| |||||| ||||||||||||||||||
Sbjct: 340 gaactaaaatctttaatcccaaggtcaagggtga 373
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>emb|CR407546.16| Zebrafish DNA sequence from clone CH211-276E3 in linkage group 17,
             complete sequence
          Length = 103614

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   ataaagacagtaaaatcactg 223
             |||||||||||||||||||||
Sbjct: 70924 ataaagacagtaaaatcactg 70944
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>gb|AC122030.3| Mus musculus BAC clone RP24-401B24 from chromosome 3, complete sequence
          Length = 123838

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 296   ttattaacttgttttcctcct 316
             |||||||||||||||||||||
Sbjct: 67280 ttattaacttgttttcctcct 67300
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>emb|AL031294.1|HS885E17 Human DNA sequence from clone RP5-885E17 on chromosome 1p33-34.1
             Contains the 5' end of a novel gene, complete sequence
          Length = 83957

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 130   tcaattcacttgcaaaattct 150
             |||||||||||||||||||||
Sbjct: 20093 tcaattcacttgcaaaattct 20113
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>emb|AL590149.9| Zebrafish DNA sequence from clone RP71-36D5 in linkage group 17
             Contains the 3' part of a novel gene similar to KIAA0953,
             a novel gene similar to POMC (propiomelanocortin), a novel
             gene similar to FCN2 (ficolin 2), a novel gene similar to
             SNX9 (sorting nexin 9) and a CpG island, complete sequence
          Length = 167272

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   ataaagacagtaaaatcactg 223
             |||||||||||||||||||||
Sbjct: 61152 ataaagacagtaaaatcactg 61172
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>emb|BX664744.10| Zebrafish DNA sequence from clone CH211-226F3 in linkage group 8,
            complete sequence
          Length = 3967

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 203  ataaagacagtaaaatcactg 223
            |||||||||||||||||||||
Sbjct: 3034 ataaagacagtaaaatcactg 3054
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>emb|BX511266.14| Zebrafish DNA sequence from clone CH211-245D7 in linkage group 14,
              complete sequence
          Length = 160419

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 203    ataaagacagtaaaatcactg 223
              |||||||||||||||||||||
Sbjct: 142341 ataaagacagtaaaatcactg 142321
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>emb|CR394529.7| Zebrafish DNA sequence from clone CH211-121F17 in linkage group 24,
             complete sequence
          Length = 75984

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   ataaagacagtaaaatcactg 223
             |||||||||||||||||||||
Sbjct: 70189 ataaagacagtaaaatcactg 70209
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>emb|CR626864.10| Zebrafish DNA sequence from clone DKEY-156N14 in linkage group 2,
             complete sequence
          Length = 173100

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   ataaagacagtaaaatcactg 223
             |||||||||||||||||||||
Sbjct: 19038 ataaagacagtaaaatcactg 19058
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>emb|CR405703.5| Zebrafish DNA sequence from clone DKEYP-52E4 in linkage group 5,
             complete sequence
          Length = 81891

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 203   ataaagacagtaaaatcactg 223
             |||||||||||||||||||||
Sbjct: 26255 ataaagacagtaaaatcactg 26235
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>emb|BX511253.13| Zebrafish DNA sequence from clone DKEY-45M5 in linkage group 8,
            complete sequence
          Length = 216373

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 203  ataaagacagtaaaatcactg 223
            |||||||||||||||||||||
Sbjct: 1121 ataaagacagtaaaatcactg 1141
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>gb|AC020703.7| Homo sapiens BAC clone RP11-259G7 from 4, complete sequence
          Length = 201105

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 295    attattaacttgttttcctcc 315
              |||||||||||||||||||||
Sbjct: 167907 attattaacttgttttcctcc 167927
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>emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, complete sequence
          Length = 135717

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 203  ataaagacagtaaaatcactg 223
            |||||||||||||||||||||
Sbjct: 3010 ataaagacagtaaaatcactg 2990
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>emb|BX324110.10| Zebrafish DNA sequence from clone DKEY-250F19 in linkage group 3,
             complete sequence
          Length = 103014

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   ataaagacagtaaaatcactg 223
             |||||||||||||||||||||
Sbjct: 49549 ataaagacagtaaaatcactg 49569
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>emb|BX324146.10| Zebrafish DNA sequence from clone CH211-207C15 in linkage group 19,
              complete sequence
          Length = 230267

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 203    ataaagacagtaaaatcactg 223
              |||||||||||||||||||||
Sbjct: 224437 ataaagacagtaaaatcactg 224457
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>emb|BX284110.16| Zebrafish DNA sequence from clone DKEYP-67D7 in linkage group 10,
             complete sequence
          Length = 179798

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   ataaagacagtaaaatcactg 223
             |||||||||||||||||||||
Sbjct: 32637 ataaagacagtaaaatcactg 32657
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>emb|BX088528.7| Zebrafish DNA sequence from clone CH211-226D23 in linkage group 1,
              complete sequence
          Length = 171618

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 203    ataaagacagtaaaatcactg 223
              |||||||||||||||||||||
Sbjct: 153913 ataaagacagtaaaatcactg 153933
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>emb|BX004756.7| Zebrafish DNA sequence from clone CH211-59A4 in linkage group 1, complete
              sequence
          Length = 169530

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 203    ataaagacagtaaaatcactg 223
              |||||||||||||||||||||
Sbjct: 116724 ataaagacagtaaaatcactg 116704
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>emb|AL954634.12| Zebrafish DNA sequence from clone DKEY-58C20 in linkage group 14,
              complete sequence
          Length = 195499

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 203    ataaagacagtaaaatcactg 223
              |||||||||||||||||||||
Sbjct: 117972 ataaagacagtaaaatcactg 117952
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>emb|AL929031.3| Zebrafish DNA sequence from clone CH211-255L18 in linkage group 17,
            complete sequence
          Length = 187548

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 203  ataaagacagtaaaatcactg 223
            |||||||||||||||||||||
Sbjct: 5751 ataaagacagtaaaatcactg 5771
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>gb|AC115029.12| Mus musculus chromosome 3, clone RP24-248I17, complete sequence
          Length = 171133

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 296 ttattaacttgttttcctcct 316
           |||||||||||||||||||||
Sbjct: 959 ttattaacttgttttcctcct 939
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>emb|AL953910.14| Zebrafish DNA sequence from clone DKEY-31E10 in linkage group 1, complete
              sequence
          Length = 190793

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 203    ataaagacagtaaaatcactg 223
              |||||||||||||||||||||
Sbjct: 181340 ataaagacagtaaaatcactg 181360
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>emb|BX004829.12| Zebrafish DNA sequence from clone DKEY-29O15, complete sequence
          Length = 231581

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 203  ataaagacagtaaaatcactg 223
            |||||||||||||||||||||
Sbjct: 4717 ataaagacagtaaaatcactg 4737
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>emb|AL929299.10| Zebrafish DNA sequence from clone BUSM1-SL6, complete sequence
          Length = 72631

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 203   ataaagacagtaaaatcactg 223
             |||||||||||||||||||||
Sbjct: 11886 ataaagacagtaaaatcactg 11866
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>emb|AL953859.7| Zebrafish DNA sequence from clone DKEY-53P21, complete sequence
          Length = 203360

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 203    ataaagacagtaaaatcactg 223
              |||||||||||||||||||||
Sbjct: 155662 ataaagacagtaaaatcactg 155642
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>emb|AL935277.6| Zebrafish DNA sequence from clone CH211-250C16, complete sequence
          Length = 69315

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 203   ataaagacagtaaaatcactg 223
             |||||||||||||||||||||
Sbjct: 30437 ataaagacagtaaaatcactg 30457
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>gb|AY229987.1| Cryptophlebia leucotreta granulovirus isolate CV3, complete genome
          Length = 110907

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 203   ataaagacagtaaaatcactggaa 226
             ||||||| ||||||||||||||||
Sbjct: 46489 ataaagagagtaaaatcactggaa 46466
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>emb|BX908777.15| Zebrafish DNA sequence from clone CH211-133H13 in linkage group 11,
             complete sequence
          Length = 88152

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   taaagacagtaaaatcactg 223
             ||||||||||||||||||||
Sbjct: 25107 taaagacagtaaaatcactg 25126
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>emb|CR387983.8| Zebrafish DNA sequence from clone DKEY-90D6 in linkage group 21,
             complete sequence
          Length = 131428

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 61144 ataaagacagtaaaatcact 61125
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>gb|AC121933.3| Mus musculus BAC clone RP24-206I11 from chromosome 8, complete sequence
          Length = 182816

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 293   ggattattaacttgttttcctcct 316
             |||||||||| |||||||||||||
Sbjct: 46784 ggattattaaattgttttcctcct 46761
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>gb|AC122436.4| Mus musculus BAC clone RP24-204P6 from chromosome 8, complete sequence
          Length = 189469

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 194   tcttcggatataaagacagtaaaatcac 221
             ||||| |||||||| |||||||||||||
Sbjct: 40812 tcttctgatataaacacagtaaaatcac 40839
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>emb|CR848031.5| Zebrafish DNA sequence from clone DKEY-288I10 in linkage group 14,
              complete sequence
          Length = 160671

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    taaagacagtaaaatcactg 223
              ||||||||||||||||||||
Sbjct: 123615 taaagacagtaaaatcactg 123596
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>emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 in linkage group 13,
             complete sequence
          Length = 206656

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 87206 ataaagacagtaaaatcact 87225
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>gb|AC128685.11| Homo sapiens 3 BAC RP11-535I24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 121201

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 141   gcaaaattctgcaaatgttccttt 164
             ||||||||||| ||||||||||||
Sbjct: 41860 gcaaaattctgaaaatgttccttt 41883
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>emb|CR376827.6| Zebrafish DNA sequence from clone CH211-154C21 in linkage group 14,
             complete sequence
          Length = 110290

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 33521 ataaagacagtaaaatcact 33502
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>emb|BX323825.19| Zebrafish DNA sequence from clone DKEYP-51B2 in linkage group 5, complete
              sequence
          Length = 185915

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    taaagacagtaaaatcactg 223
              ||||||||||||||||||||
Sbjct: 117941 taaagacagtaaaatcactg 117960
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>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23,
              complete sequence
          Length = 148736

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    cagcaggcagcagcactgca 369
              ||||||||||||||||||||
Sbjct: 114351 cagcaggcagcagcactgca 114332
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>emb|CR550304.13| Zebrafish DNA sequence from clone CH211-150I13 in linkage group 13,
             complete sequence
          Length = 118999

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 64528 ataaagacagtaaaatcact 64547
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>emb|CR589884.15| Zebrafish DNA sequence from clone CH211-206L14 in linkage group 13,
             complete sequence
          Length = 151480

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    gttttacaagtttaacatgg 116
             ||||||||||||||||||||
Sbjct: 56577 gttttacaagtttaacatgg 56596
to top
>emb|CR847504.13| Zebrafish DNA sequence from clone DKEYP-51G9 in linkage group 4, complete
              sequence
          Length = 138906

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    taaagacagtaaaatcactg 223
              ||||||||||||||||||||
Sbjct: 110034 taaagacagtaaaatcactg 110053
to top
>emb|CR384103.7| Zebrafish DNA sequence from clone DKEY-215K6 in linkage group 5,
             complete sequence
          Length = 142808

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 58143 ataaagacagtaaaatcact 58124
to top
>emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in linkage group 9, complete
              sequence
          Length = 219065

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ataaagacagtaaaatcact 222
              ||||||||||||||||||||
Sbjct: 140978 ataaagacagtaaaatcact 140959
to top
>emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in linkage group 6, complete
              sequence
          Length = 220671

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    taaagacagtaaaatcactg 223
              ||||||||||||||||||||
Sbjct: 161662 taaagacagtaaaatcactg 161643
to top
>emb|BX957239.7| Zebrafish DNA sequence from clone DKEY-173N20 in linkage group 19,
            complete sequence
          Length = 182432

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  taaagacagtaaaatcactg 223
            ||||||||||||||||||||
Sbjct: 3802 taaagacagtaaaatcactg 3783
to top
>emb|CR450725.6| Zebrafish DNA sequence from clone CH211-5A14 in linkage group 5, complete
              sequence
          Length = 186721

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ataaagacagtaaaatcact 222
              ||||||||||||||||||||
Sbjct: 130028 ataaagacagtaaaatcact 130009
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>emb|BX890597.13| Zebrafish DNA sequence from clone DKEY-65F8, complete sequence
          Length = 244779

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ataaagacagtaaaatcact 222
              ||||||||||||||||||||
Sbjct: 205246 ataaagacagtaaaatcact 205227
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>emb|AL935031.12| Zebrafish DNA sequence from clone CH211-93I23, complete sequence
          Length = 178457

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    ataaagacagtaaaatcact 222
              ||||||||||||||||||||
Sbjct: 161112 ataaagacagtaaaatcact 161131
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>gb|AC107072.3| Homo sapiens BAC clone RP11-359D14 from 4, complete sequence
          Length = 152824

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   ttaacttgttttcctcctcc 318
             ||||||||||||||||||||
Sbjct: 28803 ttaacttgttttcctcctcc 28822
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>emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in linkage group 16,
            complete sequence
          Length = 92059

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  ataaagacagtaaaatcact 222
            ||||||||||||||||||||
Sbjct: 2989 ataaagacagtaaaatcact 3008
to top
>emb|BX005140.18| Zebrafish DNA sequence from clone CH211-11F22, complete sequence
          Length = 177312

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 96372 ataaagacagtaaaatcact 96391
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>gb|AC092629.2| Homo sapiens BAC clone RP11-280J8 from 4, complete sequence
          Length = 148673

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 122  aaaaacaatcaattcacttgcaaa 145
            ||||||| ||||||||||||||||
Sbjct: 9122 aaaaacattcaattcacttgcaaa 9145
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>emb|BX511229.6| Zebrafish DNA sequence from clone CH211-194H2 in linkage group 11,
              complete sequence
          Length = 211986

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ataaagacagtaaaatcact 222
              ||||||||||||||||||||
Sbjct: 107534 ataaagacagtaaaatcact 107515
to top
>emb|BX323874.4| Zebrafish DNA sequence from clone DKEY-104N21 in linkage group 16,
             complete sequence
          Length = 256605

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   taaagacagtaaaatcactg 223
             ||||||||||||||||||||
Sbjct: 98567 taaagacagtaaaatcactg 98586
to top
>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15,
             complete sequence
          Length = 134752

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 57143 ataaagacagtaaaatcact 57124
to top
>emb|BX571853.4| Zebrafish DNA sequence from clone DKEY-29H14 in linkage group 16,
              complete sequence
          Length = 191052

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    taaagacagtaaaatcactg 223
              ||||||||||||||||||||
Sbjct: 103829 taaagacagtaaaatcactg 103848
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 350      cagcaggcagcagcactgca 369
                ||||||||||||||||||||
Sbjct: 20867526 cagcaggcagcagcactgca 20867507
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 350      cagcaggcagcagcactgca 369
                ||||||||||||||||||||
Sbjct: 17439021 cagcaggcagcagcactgca 17439040
to top
>emb|BX465852.6| Zebrafish DNA sequence from clone CH211-139A5 in linkage group 5,
             complete sequence
          Length = 160041

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   taaagacagtaaaatcactg 223
             ||||||||||||||||||||
Sbjct: 24135 taaagacagtaaaatcactg 24154
to top
>emb|BX649401.4| Zebrafish DNA sequence from clone DKEY-48E10 in linkage group 4,
             complete sequence
          Length = 211817

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 52887 ataaagacagtaaaatcact 52868
to top
>emb|BX649448.10| Zebrafish DNA sequence from clone DKEY-169I5 in linkage group 22,
             complete sequence
          Length = 184512

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 22678 ataaagacagtaaaatcact 22659
to top
>emb|BX323807.8| Zebrafish DNA sequence from clone DKEY-154P10 in linkage group 2,
             complete sequence
          Length = 194313

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 77764 ataaagacagtaaaatcact 77783
to top
>emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 in linkage group 12,
              complete sequence
          Length = 177468

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    ataaagacagtaaaatcact 222
              ||||||||||||||||||||
Sbjct: 160908 ataaagacagtaaaatcact 160927
to top
>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0040H05
          Length = 172623

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   cagcaggcagcagcactgca 369
             ||||||||||||||||||||
Sbjct: 51018 cagcaggcagcagcactgca 51037
to top
>emb|BX005267.7| Zebrafish DNA sequence from clone DKEY-46K2 in linkage group 19,
            complete sequence
          Length = 104035

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 203  ataaagacagtaaaatcact 222
            ||||||||||||||||||||
Sbjct: 9219 ataaagacagtaaaatcact 9200
to top
>emb|AL845168.5| Zebrafish DNA sequence from clone DKEY-91M11, complete sequence
          Length = 198627

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 12937 ataaagacagtaaaatcact 12918
to top
>emb|CT967325.1| Zebrafish DNA sequence from clone DKEY-25K11, complete sequence
          Length = 267826

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ataaagacagtaaaatcact 222
              ||||||||||||||||||||
Sbjct: 265392 ataaagacagtaaaatcact 265373
to top
>emb|CR556723.6| Zebrafish DNA sequence from clone CH211-176K6 in linkage group 13,
             complete sequence
          Length = 86020

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    gttttacaagtttaacatgg 116
             ||||||||||||||||||||
Sbjct: 24812 gttttacaagtttaacatgg 24793
to top
>emb|CR382336.11| Zebrafish DNA sequence from clone CH211-125A6 in linkage group 19,
            complete sequence
          Length = 175656

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  ataaagacagtaaaatcact 222
            ||||||||||||||||||||
Sbjct: 3195 ataaagacagtaaaatcact 3214
to top
>emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in linkage group 4,
             complete sequence
          Length = 127818

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 17215 ataaagacagtaaaatcact 17196
to top
>emb|BX547928.7| Zebrafish DNA sequence from clone DKEY-172O10 in linkage group 4,
              complete sequence
          Length = 228177

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    ataaagacagtaaaatcact 222
              ||||||||||||||||||||
Sbjct: 158969 ataaagacagtaaaatcact 158988
to top
>emb|BX000529.13| Zebrafish DNA sequence from clone DKEY-191N2 in linkage group 3, complete
              sequence
          Length = 231807

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ataaagacagtaaaatcact 222
              ||||||||||||||||||||
Sbjct: 155813 ataaagacagtaaaatcact 155794
to top
>emb|BX004834.13| Zebrafish DNA sequence from clone CH211-42E22 in linkage group 18,
              complete sequence
          Length = 188895

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    ataaagacagtaaaatcact 222
              ||||||||||||||||||||
Sbjct: 105654 ataaagacagtaaaatcact 105673
to top
>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18,
              complete sequence
          Length = 248419

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    ataaagacagtaaaatcact 222
              ||||||||||||||||||||
Sbjct: 214669 ataaagacagtaaaatcact 214688
to top
>emb|BX119962.3| Zebrafish DNA sequence from clone CH211-203L9 in linkage group 19,
             complete sequence
          Length = 190702

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   taaagacagtaaaatcactg 223
             ||||||||||||||||||||
Sbjct: 99197 taaagacagtaaaatcactg 99216
to top
>emb|CR749179.8| Zebrafish DNA sequence from clone DKEY-33A13 in linkage group 11,
             complete sequence
          Length = 90503

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 33456 ataaagacagtaaaatcact 33475
to top
>emb|CR318629.4| Zebrafish DNA sequence from clone DKEY-30I24 in linkage group 23,
             complete sequence
          Length = 89377

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 26738 ataaagacagtaaaatcact 26757
to top
>emb|BX004853.7| Zebrafish DNA sequence from clone DKEY-13O11, complete sequence
          Length = 182526

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ataaagacagtaaaatcact 222
              ||||||||||||||||||||
Sbjct: 135883 ataaagacagtaaaatcact 135864
to top
>emb|BX001004.11| Zebrafish DNA sequence from clone DKEY-30N2 in linkage group 5,
             complete sequence
          Length = 82272

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 76618 ataaagacagtaaaatcact 76637
to top
>emb|CR555293.8| Zebrafish DNA sequence from clone DKEY-23P14 in linkage group 11,
              complete sequence
          Length = 220631

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    ataaagacagtaaaatcact 222
              ||||||||||||||||||||
Sbjct: 158653 ataaagacagtaaaatcact 158672
to top
>emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in linkage group 12,
              complete sequence
          Length = 211571

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    taaagacagtaaaatcactg 223
              ||||||||||||||||||||
Sbjct: 167130 taaagacagtaaaatcactg 167149
to top
>emb|CR925805.14| Zebrafish DNA sequence from clone DKEY-99N20 in linkage group 16,
             complete sequence
          Length = 180576

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ataaagacagtaaaatcact 222
             ||||||||||||||||||||
Sbjct: 20534 ataaagacagtaaaatcact 20553
to top
>emb|CR759813.6| Zebrafish DNA sequence from clone DKEY-150H10 in linkage group 18,
              complete sequence
          Length = 152902

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    taaagacagtaaaatcactg 223
              ||||||||||||||||||||
Sbjct: 122488 taaagacagtaaaatcactg 122507
to top
>emb|AL954327.12| Zebrafish DNA sequence from clone DKEY-18H14 in linkage group 16,
             complete sequence
          Length = 237124

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   taaagacagtaaaatcactg 223
             ||||||||||||||||||||
Sbjct: 67469 taaagacagtaaaatcactg 67450
to top
>emb|BX005063.7| Zebrafish DNA sequence from clone CH211-101D12, complete sequence
          Length = 24458

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   taaagacagtaaaatcactg 223
             ||||||||||||||||||||
Sbjct: 20964 taaagacagtaaaatcactg 20945
to top
>emb|AL928828.6| Zebrafish DNA sequence from clone CH211-30I2, complete sequence
          Length = 169046

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    ataaagacagtaaaatcact 222
              ||||||||||||||||||||
Sbjct: 126149 ataaagacagtaaaatcact 126168


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,839,261
Number of Sequences: 3902068
Number of extensions: 3839261
Number of successful extensions: 78405
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78135
Number of HSP's gapped (non-prelim): 270
length of query: 374
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 352
effective length of database: 17,147,199,772
effective search space: 6035814319744
effective search space used: 6035814319744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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