>gb|AY579884.1| Hordeum vulgare AML6 mRNA, complete cds
          Length = 3269

 Score =  381 bits (192), Expect = e-102
 Identities = 207/212 (97%)
 Strand = Plus / Minus

                                                                        
Query: 127  tcacctcctgcgcatttcgcccaccttgcaaccgtccaaactctaaagttcgtcggcggg 186
            ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 3132 tcacctcctgcgcatttcgcccaccttgcaaccgtccgaactctagagttcgtcggcggg 3073

                                                                        
Query: 187  gcaaaaacgagggcgcccttgcgcaacttactcacggggaatcgccagcaaaccgtccga 246
            ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 3072 gcaaaaacgagggcgcccttgcgcaacttactcacggcgaatcgccagcagaccgtccga 3013

                                                                        
Query: 247  actcgctacatgccccagccttgccggagagaaaaataaatagcaaaaccgggggtaatt 306
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 3012 actcgctacatgccccagccttgccggagagaaaaataaatagcaaaactgggggtaatt 2953

                                            
Query: 307  tattgcagcttcttcgtcctccagttagtgag 338
            ||||||||||||||||||||||||||||||||
Sbjct: 2952 tattgcagcttcttcgtcctccagttagtgag 2921



 Score =  168 bits (85), Expect = 7e-39
 Identities = 91/93 (97%)
 Strand = Plus / Minus

                                                                        
Query: 10   aaaatgaaccgagtttaaattaaaagcattcaagtcagattagcatccaacacccctcca 69
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3251 aaaatgaaccgagtttaaattaaaagcattcaagtcagattagcatccaacacccctcca 3192

                                             
Query: 70   actcaactggacagctccccatcccttttcttg 102
            ||||||||| |||||||||||||||| ||||||
Sbjct: 3191 actcaactgtacagctccccatccctcttcttg 3159

>emb|CR962134.2| Medicago truncatula chromosome 5 clone mte1-40n1, COMPLETE SEQUENCE
          Length = 139651

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 274    agagaaaaataaatagcaaaa 294
              |||||||||||||||||||||
Sbjct: 114044 agagaaaaataaatagcaaaa 114024

>dbj|AB076248.1| Mus musculus DNA, BAC clone:No.251,465
          Length = 158570

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 280   aaataaatagcaaaaccgggg 300
             |||||||||||||||||||||
Sbjct: 94826 aaataaatagcaaaaccgggg 94846

>emb|AL611963.24| Mouse DNA sequence from clone RP23-79J18 on chromosome 4, complete
             sequence
          Length = 222196

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 280   aaataaatagcaaaaccgggg 300
             |||||||||||||||||||||
Sbjct: 15119 aaataaatagcaaaaccgggg 15139

>emb|AL669984.1| Human DNA sequence from clone RP11-775I22 on chromosome 6 Contains part
             of the LAMA2 gene for laminin, alpha 2 (merosin,
             congenital muscular dystrophy) (LAMM) and a bone
             morphogenetic protein receptor type IA (BMPR1B)
             pseudogene, complete sequence
          Length = 93893

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   gagaaaaataaatagcaaaa 294
             ||||||||||||||||||||
Sbjct: 62663 gagaaaaataaatagcaaaa 62682

>gb|AC159188.2| Mus musculus BAC clone RP24-247J24 from chromosome 13, complete
             sequence
          Length = 197018

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   tgcagcttcttcgtcctcca 329
             ||||||||||||||||||||
Sbjct: 25911 tgcagcttcttcgtcctcca 25892

>dbj|AK124893.1| Homo sapiens cDNA FLJ42903 fis, clone BRHIP3013765
          Length = 3721

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 268  tgccggagagaaaaataaat 287
            ||||||||||||||||||||
Sbjct: 2309 tgccggagagaaaaataaat 2290

>gb|AC026441.5| Homo sapiens chromosome 5 clone CTD-2280O3, complete sequence
          Length = 112533

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    aaattaaaagcattcaagtc 45
             ||||||||||||||||||||
Sbjct: 52908 aaattaaaagcattcaagtc 52889

>ref|XM_941162.1| PREDICTED: Homo sapiens FLJ42903 protein (LOC400950), mRNA
          Length = 3709

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 268  tgccggagagaaaaataaat 287
            ||||||||||||||||||||
Sbjct: 2303 tgccggagagaaaaataaat 2284

>ref|XM_376049.2| PREDICTED: Homo sapiens FLJ42903 protein (LOC400950), mRNA
          Length = 3709

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 268  tgccggagagaaaaataaat 287
            ||||||||||||||||||||
Sbjct: 2303 tgccggagagaaaaataaat 2284

>gb|AC008562.5| Homo sapiens chromosome 5 clone CTC-535M15, complete sequence
          Length = 127259

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   gagaaaaataaatagcaaaa 294
             ||||||||||||||||||||
Sbjct: 60953 gagaaaaataaatagcaaaa 60972

>gb|AC104654.3| Homo sapiens BAC clone RP11-310J6 from 2, complete sequence
          Length = 55946

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   tgccggagagaaaaataaat 287
             ||||||||||||||||||||
Sbjct: 47304 tgccggagagaaaaataaat 47323

>gb|AC020717.3|AC020717 Homo sapiens BAC clone RP11-451L9 from Xq23, complete sequence
          Length = 166434

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    agagaaaaataaatagcaaa 293
              ||||||||||||||||||||
Sbjct: 152428 agagaaaaataaatagcaaa 152409

>gb|AC016648.5|AC016648 Homo sapiens chromosome 5 clone RPCI-1_137K24, complete sequence
          Length = 123946

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    aaattaaaagcattcaagtc 45
             ||||||||||||||||||||
Sbjct: 77697 aaattaaaagcattcaagtc 77716

>gb|AC155244.2| Mus musculus BAC clone RP24-318B2 from 13, complete sequence
          Length = 198847

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 310   tgcagcttcttcgtcctcca 329
             ||||||||||||||||||||
Sbjct: 77106 tgcagcttcttcgtcctcca 77125

>gb|AC154406.2| Mus musculus BAC clone RP24-251M20 from 9, complete sequence
          Length = 169877

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     ttaaaagcattcaagtcaga 48
              ||||||||||||||||||||
Sbjct: 145499 ttaaaagcattcaagtcaga 145518

>gb|AC134329.3| Mus musculus BAC clone RP24-310D17 from 10, complete sequence
          Length = 159173

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    ccaacacccctccaactcaa 75
             ||||||||||||||||||||
Sbjct: 97298 ccaacacccctccaactcaa 97317

>emb|AL954191.5| Zebrafish DNA sequence from clone CH211-230G14, complete sequence
          Length = 151595

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    ttaaattaaaagcattcaagtcag 47
             ||||||||| ||||||||||||||
Sbjct: 57863 ttaaattaacagcattcaagtcag 57886

>emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chromosome 2, complete
             sequence
          Length = 190994

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   agaaaaataaatagcaaaac 295
             ||||||||||||||||||||
Sbjct: 76708 agaaaaataaatagcaaaac 76727

>gb|M19782.1|PARASAGH P.tetraurelia A-surface antigen gene locus DNA, clone SA4-3
          Length = 612

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 23  tttaaattaaaagcattcaa 42
           ||||||||||||||||||||
Sbjct: 375 tttaaattaaaagcattcaa 356


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,209,537
Number of Sequences: 3902068
Number of extensions: 3209537
Number of successful extensions: 55760
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55726
Number of HSP's gapped (non-prelim): 33
length of query: 338
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 316
effective length of database: 17,147,199,772
effective search space: 5418515127952
effective search space used: 5418515127952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)