Clone Name | rbastl05e05 |
---|---|
Clone Library Name | barley_pub |
>CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3| Length = 1396 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 Query: 121 FLHNL*QCTVVLEYSVGYNISCQHCRSRKLN 29 ++ NL C LEY GY ++ H RKLN Sbjct: 1319 YMRNLSNCVPTLEYFTGYKMAELHILVRKLN 1349
>TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 438 Score = 28.9 bits (63), Expect = 3.5 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +3 Query: 9 ISQNNLKFSFRLLQC*HDIL*PTEYSKTTVHCYKLCKN 122 + +NNL F+FR + H + +E K + HC K+C N Sbjct: 34 LKKNNLNFTFRAIHINHQLHPDSE--KWSDHCKKICIN 69
>MDR_LEITA (P21441) Multidrug resistance protein (EC 3.6.3.44)| (P-glycoprotein) Length = 1548 Score = 28.5 bits (62), Expect = 4.6 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = -1 Query: 144 PMLLFLFSSYTICNNVLWFWSI-LSVTIYRVNIV 46 P+LL F Y +N W W + L++TI+ N++ Sbjct: 249 PVLLEYFVKYLNADNATWGWGLGLALTIFLTNVI 282
>HRMA_PSESY (Q08370) Protein hrmA| Length = 375 Score = 28.5 bits (62), Expect = 4.6 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +2 Query: 140 IGGDTKTSHLTEEEKKKALFIPRLQQELGRR 232 IGG ++ + + + +KA +PRL + LGRR Sbjct: 69 IGGQSQRAQIAQVLNEKAAAVPRLDRMLGRR 99
>CATF_MOUSE (Q9R013) Cathepsin F precursor (EC 3.4.22.41)| Length = 462 Score = 28.1 bits (61), Expect = 6.0 Identities = 16/34 (47%), Positives = 18/34 (52%) Frame = +2 Query: 146 GDTKTSHLTEEEKKKALFIPRLQQELGRRRRKTK 247 G TK S LTEEE P LQ+E GR+ K Sbjct: 210 GITKFSDLTEEEFHTIYLNPLLQKESGRKMSPAK 243
>NAD2_CAEEL (P32739) Sodium-dependent high-affinity dicarboxylate transporter 2| (Na(+)/dicarboxylate cotransporter 2) (NaDC-2) (ceNaDC2) Length = 551 Score = 27.7 bits (60), Expect = 7.8 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -1 Query: 171 VKWDVFVSPPMLLFLFSSYTI 109 ++W VF PPM ++L +SY I Sbjct: 241 LQWMVFAIPPMFVYLLASYII 261
>HCYG_OCTDO (O61363) Hemocyanin G-type, units Oda to Odg| Length = 2896 Score = 27.7 bits (60), Expect = 7.8 Identities = 21/75 (28%), Positives = 35/75 (46%) Frame = +2 Query: 41 TPTMLTRYIVTDRILQNHSTLLQIV*ELKRNNNIGGDTKTSHLTEEEKKKALFIPRLQQE 220 +P LT I D + + HS + + K+N + D + L IP+L +E Sbjct: 1080 SPFSLTSDINIDPMTREHSVPFDVF-DYKKNFHYEYDLL--------ELNGLSIPQLHRE 1130 Query: 221 LGRRRRKTKIHGFFL 265 + RRR K++I F+ Sbjct: 1131 ISRRRAKSRIFATFM 1145 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,504,909 Number of Sequences: 219361 Number of extensions: 887143 Number of successful extensions: 2745 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2695 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2744 length of database: 80,573,946 effective HSP length: 72 effective length of database: 64,779,954 effective search space used: 1554718896 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)