ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl05e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor is... 293 2e-76
2gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor i... 287 1e-74
3emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 100 5e-18
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 100 5e-18
5dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 5e-18
6dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 5e-18
7emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 100 5e-18
8gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete se... 46 0.062
9gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete s... 46 0.062
10emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5... 44 0.24
11gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete seq... 42 0.96
12gb|AC174297.11| Medicago truncatula clone mth2-73p24, complete s... 42 0.96
13gb|AC144540.7| Medicago truncatula clone mth2-19p16, complete se... 42 0.96
14gb|AC146745.20| Medicago truncatula clone mth2-53p19, complete s... 42 0.96
15gb|AC144657.6| Medicago truncatula clone mth2-16a6, complete seq... 42 0.96
16gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete s... 42 0.96
17emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chr... 42 0.96
18gb|AC026415.4| Homo sapiens chromosome 5 clone CTD-2046I8, compl... 42 0.96
19gb|AC022127.4|AC022127 Homo sapiens chromosome 5 clone CTD-2151N... 42 0.96
20dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 0.96
21emb|CT033770.2| Medicago truncatula chromosome 5 clone mth2-176e... 42 0.96
22gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosom... 40 3.8
23gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, com... 40 3.8
24emb|CT025598.9| Mouse DNA sequence from clone RP23-218L3 on chro... 40 3.8
25gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, c... 40 3.8
26gb|AC124740.4| Mus musculus BAC clone RP23-356M1 from chromosome... 40 3.8
27gb|AC104885.8| Mus musculus chromosome 16, clone RP23-125P19, co... 40 3.8
28gb|AC126792.15| Medicago truncatula clone mth2-8o8, complete seq... 40 3.8
29gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's ... 40 3.8
30emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on ch... 40 3.8
31emb|AL354701.7| Human DNA sequence from clone RP11-785H23 on chr... 40 3.8
32gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's... 40 3.8
33emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chr... 40 3.8
34emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo... 40 3.8
35emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 ... 40 3.8
36gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, comp... 40 3.8
37gb|AC008158.16| Homo sapiens chromosome 17, clone RP11-42F20, co... 40 3.8
38gb|AC008650.8| Homo sapiens chromosome 5 clone CTB-186M2, comple... 40 3.8
39dbj|AK038355.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 3.8
40gb|AC084664.1|CBRG47C14 Caenorhabditis briggsae cosmid G47C14, c... 40 3.8
41dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome 40 3.8
42emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chro... 40 3.8
43emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in ... 40 3.8
44emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-9... 40 3.8
45gb|AC154608.3| Mus musculus BAC clone RP23-334N8 from chromosome... 40 3.8
46gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete... 40 3.8
47gb|AF107301.1|AF107301 Rattus norvegicus secretogranin II promot... 40 3.8
48gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, compl... 40 3.8 
>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA
            sequence
          Length = 2863

 Score =  293 bits (148), Expect = 2e-76
 Identities = 157/160 (98%)
 Strand = Plus / Minus

                                                                        
Query: 11   aagccaaaataatcttaaattcagttttcgactcctacaatgttgacacgatatattgta 70
            |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2863 aagccaaaatgatcttagattcagttttcgactcctacaatgctgacacgatatattgta 2804

                                                                        
Query: 71   accgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaaga 130
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2803 accgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaaga 2744

                                                    
Query: 131  aataataacattggaggagacacaaaaacatcccatttga 170
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2743 aataataacattggaggagacacaaaaacatcccatttga 2704



 Score =  123 bits (62), Expect = 3e-25
 Identities = 94/102 (92%), Gaps = 2/102 (1%)
 Strand = Plus / Minus

                                                                        
Query: 191  gccttgttcattcccaggctccagcaagagttaggccgccgtcgcc-gaaagaccaaaat 249
            |||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||
Sbjct: 2693 gccttgttcattcccaggctccagcaagagttaggccgccgtcgccagagagacc-aaat 2635

                                                      
Query: 250  ccatggttttttcctttcctccaaacaataatcaacactcat 291
            |||||| || || || ||||| ||||||||||||||||||||
Sbjct: 2634 ccatggcttctttctgtcctcgaaacaataatcaacactcat 2593
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>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA,
            complete cds
          Length = 2887

 Score =  287 bits (145), Expect = 1e-74
 Identities = 151/153 (98%)
 Strand = Plus / Minus

                                                                        
Query: 16   aaaataatcttaaattcagttttcgactcctacaatgttgacacgatatattgtaaccga 75
            |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2862 aaaataatcttagattcagttttcgactcctacaatgctgacacgatatattgtaaccga 2803

                                                                        
Query: 76   cagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaagaaataa 135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2802 cagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaagaaataa 2743

                                             
Query: 136  taacattggaggagacacaaaaacatcccattt 168
            |||||||||||||||||||||||||||||||||
Sbjct: 2742 taacattggaggagacacaaaaacatcccattt 2710



 Score =  161 bits (81), Expect = 2e-36
 Identities = 96/101 (95%)
 Strand = Plus / Minus

                                                                        
Query: 191  gccttgttcattcccaggctccagcaagagttaggccgccgtcgccgaaagaccaaaatc 250
            ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 2696 gccttgttcattcccaggctccagcgagagttaggccgccgtcgccgagagaccaaaatc 2637

                                                     
Query: 251  catggttttttcctttcctccaaacaataatcaacactcat 291
            ||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 2636 catggcttcttcctttcctcgaaacaataatcaacactcat 2596
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                         
Query: 54    tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 112
             |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 42105 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 42164

                                       
Query: 113   gtgtaagaactgaaaagaaataataa 138
             ||||| | || |||||||| ||||||
Sbjct: 42165 gtgtacgcacagaaaagaactaataa 42190
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                            
Query: 54       tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 112
                |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 24921520 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 24921579

                                          
Query: 113      gtgtaagaactgaaaagaaataataa 138
                ||||| | || |||||||| ||||||
Sbjct: 24921580 gtgtacgcacagaaaagaactaataa 24921605
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>dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N14, full
            insert sequence
          Length = 2907

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 54   tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 112
            |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 2795 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 2736

                                      
Query: 113  gtgtaagaactgaaaagaaataataa 138
            ||||| | || |||||||| ||||||
Sbjct: 2735 gtgtacgcacagaaaagaactaataa 2710
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>dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A02, full
            insert sequence
          Length = 1712

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 54   tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 112
            |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 1701 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 1642

                                      
Query: 113  gtgtaagaactgaaaagaaataataa 138
            ||||| | || |||||||| ||||||
Sbjct: 1641 gtgtacgcacagaaaagaactaataa 1616
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                         
Query: 54    tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 112
             |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 49634 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 49693

                                       
Query: 113   gtgtaagaactgaaaagaaataataa 138
             ||||| | || |||||||| ||||||
Sbjct: 49694 gtgtacgcacagaaaagaactaataa 49719
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>gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete sequence
          Length = 92346

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 153   caaaaacatcccatttgacagaagaag 179
             |||||||||||||||||| ||||||||
Sbjct: 45816 caaaaacatcccatttgagagaagaag 45842
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>gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete sequence
          Length = 105045

 Score = 46.1 bits (23), Expect = 0.062
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 153   caaaaacatcccatttgacagaagaag 179
             |||||||||||||||||| ||||||||
Sbjct: 28363 caaaaacatcccatttgagagaagaag 28337
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>emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5 on chromosome X, complete
            sequence
          Length = 39550

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 117  aagaactgaaaagaaataataacatt 142
            |||| |||||||||||||||||||||
Sbjct: 3229 aagagctgaaaagaaataataacatt 3204
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>gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete sequence
          Length = 131049

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 16     aaaataatcttaaattcagtt 36
              |||||||||||||||||||||
Sbjct: 100850 aaaataatcttaaattcagtt 100830
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>gb|AC174297.11| Medicago truncatula clone mth2-73p24, complete sequence
          Length = 115210

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    aaaataatcttaaattcagtt 36
             |||||||||||||||||||||
Sbjct: 48268 aaaataatcttaaattcagtt 48248
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>gb|AC144540.7| Medicago truncatula clone mth2-19p16, complete sequence
          Length = 78737

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    aaaataatcttaaattcagtt 36
             |||||||||||||||||||||
Sbjct: 25465 aaaataatcttaaattcagtt 25445
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>gb|AC146745.20| Medicago truncatula clone mth2-53p19, complete sequence
          Length = 121952

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 16    aaaataatcttaaattcagtt 36
             |||||||||||||||||||||
Sbjct: 34894 aaaataatcttaaattcagtt 34914
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>gb|AC144657.6| Medicago truncatula clone mth2-16a6, complete sequence
          Length = 92738

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 16    aaaataatcttaaattcagtt 36
             |||||||||||||||||||||
Sbjct: 85376 aaaataatcttaaattcagtt 85396
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>gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete sequence
          Length = 97982

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    aaaataatcttaaattcagtt 36
             |||||||||||||||||||||
Sbjct: 42222 aaaataatcttaaattcagtt 42202
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>emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chromosome 13q21.33-22.3
             Contains a signal sequence receptor, alpha
             (translocon-associated protein alpha) (SSR1) pseudogene,
             complete sequence
          Length = 151603

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   tcccaggctccagcaagagtt 222
             |||||||||||||||||||||
Sbjct: 87107 tcccaggctccagcaagagtt 87087
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>gb|AC026415.4| Homo sapiens chromosome 5 clone CTD-2046I8, complete sequence
          Length = 67124

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 202  tcccaggctccagcaagagtt 222
            |||||||||||||||||||||
Sbjct: 3598 tcccaggctccagcaagagtt 3618
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>gb|AC022127.4|AC022127 Homo sapiens chromosome 5 clone CTD-2151N11, complete sequence
          Length = 83029

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   tcccaggctccagcaagagtt 222
             |||||||||||||||||||||
Sbjct: 34025 tcccaggctccagcaagagtt 34005
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 235     ccgaaagaccaaaatccatgg 255
               |||||||||||||||||||||
Sbjct: 3991651 ccgaaagaccaaaatccatgg 3991631
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>emb|CT033770.2| Medicago truncatula chromosome 5 clone mth2-176e1, COMPLETE SEQUENCE
          Length = 138194

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    aaaataatcttaaattcagtt 36
             |||||||||||||||||||||
Sbjct: 84861 aaaataatcttaaattcagtt 84841
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>gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosome 8, complete sequence
          Length = 153426

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   gaaaagaaataataacattg 143
             ||||||||||||||||||||
Sbjct: 39323 gaaaagaaataataacattg 39342
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>gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, complete sequence
          Length = 186062

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    aaattgtgtaagaactgaaa 127
              ||||||||||||||||||||
Sbjct: 107485 aaattgtgtaagaactgaaa 107504
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>emb|CT025598.9| Mouse DNA sequence from clone RP23-218L3 on chromosome 13, complete
              sequence
          Length = 228266

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 257    tttttcctttcctccaaacaataa 280
              |||| |||||||||||||||||||
Sbjct: 113780 ttttgcctttcctccaaacaataa 113803
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>gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, complete sequence
          Length = 192584

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 104    ttacaaattgtgtaagaactgaaaagaaataa 135
              |||||||| || ||||||||||||| ||||||
Sbjct: 132634 ttacaaatagtttaagaactgaaaataaataa 132665
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>gb|AC124740.4| Mus musculus BAC clone RP23-356M1 from chromosome 18, complete sequence
          Length = 190023

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   cccaggctccagcaagagtt 222
             ||||||||||||||||||||
Sbjct: 97827 cccaggctccagcaagagtt 97808
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>gb|AC104885.8| Mus musculus chromosome 16, clone RP23-125P19, complete sequence
          Length = 211414

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   tggttttttcctttcctcca 272
             ||||||||||||||||||||
Sbjct: 21604 tggttttttcctttcctcca 21623
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>gb|AC126792.15| Medicago truncatula clone mth2-8o8, complete sequence
          Length = 105297

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  ttttttcctttcctccaaac 275
            ||||||||||||||||||||
Sbjct: 7658 ttttttcctttcctccaaac 7677
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>gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 170859

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   tgaaaagaaataataacatt 142
             ||||||||||||||||||||
Sbjct: 30825 tgaaaagaaataataacatt 30844
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>emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on chromosome 9, complete
           sequence
          Length = 164559

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 ttgtgtaagaactgaaaagaaata 134
           |||||||||||||||||| |||||
Sbjct: 55  ttgtgtaagaactgaaaaaaaata 32
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>emb|AL354701.7| Human DNA sequence from clone RP11-785H23 on chromosome 9 Contains the 3'
              end of a novel gene, and a novel pseudogene, complete
              sequence
          Length = 131366

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 111    ttgtgtaagaactgaaaagaaata 134
              |||||||||||||||||| |||||
Sbjct: 129421 ttgtgtaagaactgaaaaaaaata 129398
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>gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 211584

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   tgaaaagaaataataacatt 142
             ||||||||||||||||||||
Sbjct: 41625 tgaaaagaaataataacatt 41606
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>emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chromosome 13 Contains the
             Foxq1 gene for forkhead box Q1 (Hfh1l), two novel genes
             and two CpG islands, complete sequence
          Length = 187709

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   ttcattcccaggctccagca 216
             ||||||||||||||||||||
Sbjct: 35935 ttcattcccaggctccagca 35916
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>emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo-8-phosphate synthase, exons
           1-4
          Length = 1812

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 116 taagaactgaaaagaaataa 135
           ||||||||||||||||||||
Sbjct: 639 taagaactgaaaagaaataa 620
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>emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 in linkage group 20,
             complete sequence
          Length = 86384

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   tgaaaagaaataataacatt 142
             ||||||||||||||||||||
Sbjct: 84744 tgaaaagaaataataacatt 84763
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>gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, complete sequence
          Length = 96678

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   acaaattgtgtaagaactga 125
             ||||||||||||||||||||
Sbjct: 56401 acaaattgtgtaagaactga 56382
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>gb|AC008158.16| Homo sapiens chromosome 17, clone RP11-42F20, complete sequence
          Length = 148110

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 194   ttgttcattcccaggctcca 213
             ||||||||||||||||||||
Sbjct: 70836 ttgttcattcccaggctcca 70817
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>gb|AC008650.8| Homo sapiens chromosome 5 clone CTB-186M2, complete sequence
          Length = 139226

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    aagccaaaataatcttaaat 30
             ||||||||||||||||||||
Sbjct: 28464 aagccaaaataatcttaaat 28483
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>dbj|AK038355.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130097D18
           product:unclassifiable, full insert sequence
          Length = 719

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 cccaggctccagcaagagtt 222
           ||||||||||||||||||||
Sbjct: 28  cccaggctccagcaagagtt 9
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>gb|AC084664.1|CBRG47C14 Caenorhabditis briggsae cosmid G47C14, complete sequence
          Length = 41476

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  gtgtaagaactgaaaagaaa 132
            ||||||||||||||||||||
Sbjct: 5836 gtgtaagaactgaaaagaaa 5855
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>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome
          Length = 860631

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 116    taagaactgaaaagaaataataac 139
              |||||||| |||||||||||||||
Sbjct: 183747 taagaacttaaaagaaataataac 183724
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>emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chromosome 2, complete
             sequence
          Length = 159731

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   gaaaagaaataataacattg 143
             ||||||||||||||||||||
Sbjct: 65829 gaaaagaaataataacattg 65810
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>emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in linkage group 20,
           complete sequence
          Length = 9831

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 123 tgaaaagaaataataacatt 142
           ||||||||||||||||||||
Sbjct: 360 tgaaaagaaataataacatt 379
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>emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-99L13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178433

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 136   taacattggaggagacacaaaaac 159
             ||||||||||||||||||| ||||
Sbjct: 93093 taacattggaggagacacataaac 93116
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>gb|AC154608.3| Mus musculus BAC clone RP23-334N8 from chromosome 16, complete sequence
          Length = 212928

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    tggttttttcctttcctcca 272
              ||||||||||||||||||||
Sbjct: 201200 tggttttttcctttcctcca 201219
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>gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete sequence
          Length = 136080

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   ttcccaggctccagcaagag 220
             ||||||||||||||||||||
Sbjct: 42008 ttcccaggctccagcaagag 41989
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>gb|AF107301.1|AF107301 Rattus norvegicus secretogranin II promoter and 5' untranslated
           region
          Length = 2813

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 238 aaagaccaaaatccatggtttttt 261
           ||||||||||||||||||| ||||
Sbjct: 546 aaagaccaaaatccatggtgtttt 523
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>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence
          Length = 179585

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  gaaaagaaataataacattg 143
            ||||||||||||||||||||
Sbjct: 7379 gaaaagaaataataacattg 7360


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,910,363
Number of Sequences: 3902068
Number of extensions: 3910363
Number of successful extensions: 88251
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88090
Number of HSP's gapped (non-prelim): 155
length of query: 291
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 269
effective length of database: 17,147,199,772
effective search space: 4612596738668
effective search space used: 4612596738668
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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