>SYV_FUSNN (Q8RHK3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 887

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 412 RNLAENVWQTSLLMRRNYQPFDVDSVEPLPLDH 314
           RN A  +W  +  +  N + FDV SV+   LD+
Sbjct: 576 RNFANKIWNATRFVIMNLKGFDVKSVDKTKLDY 608

>SYV_GEOSL (Q74BJ6) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 887

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 412 RNLAENVWQTSLLMRRNYQPFDVDSVEPLPLD 317
           RN    +W  S     N + F+ D+V+P  LD
Sbjct: 575 RNFVNKIWNASRFALMNLEGFEPDTVDPATLD 606

>YD179_YEAST (Q03983) Protein YDR179W-A|
          Length = 463

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 134 SQISNLQQAMYITWSNISTTTSYSPRASADLQYELGHKLFQN 259
           S+++ L + MY T+ NI  T   SP    +L   L H LF N
Sbjct: 345 SKLNALNRVMYRTFDNIVQTKITSPVTIGNLFSLLRHSLFPN 386

>ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
          Length = 534

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 327 CRWTITPNLKCLEQTLLK*YVTTFWKSLWPSSYCRSAEALGL*LVVVE 184
           CR+TI    + LE TLL+      W S  P   CR+   +G   ++++
Sbjct: 121 CRFTIVVATQLLESTLLR-LADVLWNSQIPLLICRTYGLVGYMRIIIK 167

>ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (Amyloid beta precursor
           protein-binding protein 1, 59 kDa) (APP-BP1)
          Length = 534

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 327 CRWTITPNLKCLEQTLLK*YVTTFWKSLWPSSYCRSAEALGL*LVVVE 184
           CR+TI    + LE TLL+      W S  P   CR+   +G   ++++
Sbjct: 121 CRFTIVVATQLLESTLLR-LADVLWNSQIPLLICRTYGLVGYMRIIIK 167


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,631,304
Number of Sequences: 219361
Number of extensions: 1162823
Number of successful extensions: 2937
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2936
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)