ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl05e02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ACA1_ARATH (Q37145) Calcium-transporting ATPase 1, chloroplast p... 44 1e-04
2ACA2_ARATH (O81108) Calcium-transporting ATPase 2, plasma membra... 39 0.006
3ACA7_ARATH (O64806) Putative calcium-transporting ATPase 7, plas... 38 0.011
4ACA9_ARATH (Q9LU41) Putative calcium-transporting ATPase 9, plas... 37 0.018
5CYCH_BRAJA (P45399) Cytochrome c-type biogenesis protein cycH 35 0.054
6ACA4_ARATH (O22218) Calcium-transporting ATPase 4, plasma membra... 34 0.12
7ACA11_ARATH (Q9M2L4) Putative calcium-transporting ATPase 11, pl... 31 1.0
8CP128_MYCTU (P63713) Putative cytochrome P450 128 (EC 1.14.-.-) 31 1.3
9CP128_MYCBO (P63714) Putative cytochrome P450 128 (EC 1.14.-.-) 31 1.3
10YEB6_YEAST (P39997) Hypothetical 57.4 kDa protein in PMP2-VAC8 i... 31 1.3
11YCR6_YEAST (P25353) Hypothetical protein YCR026C 30 1.7
12ATC1_DICDI (P54678) Probable calcium-transporting ATPase PAT1 (E... 30 2.9
13ACA8_ARATH (Q9LF79) Calcium-transporting ATPase 8, plasma membra... 30 2.9
14HMIN_DROME (P05527) Homeobox protein invected 29 3.8
15ATP6_LATCH (O03169) ATP synthase a chain (EC 3.6.3.14) (ATPase p... 29 3.8
16SPT8_YEAST (P38915) Transcription factor SPT8 29 5.0
17ACA10_ARATH (Q9SZR1) Putative calcium-transporting ATPase 10, pl... 28 6.6
18FA98A_PONPY (Q5R679) Protein FAM98A 28 8.6
19FA98A_HUMAN (Q8NCA5) Protein FAM98A 28 8.6
20ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 prot... 28 8.6

>ACA1_ARATH (Q37145) Calcium-transporting ATPase 1, chloroplast precursor (EC|
            3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope
            ATPase 1)
          Length = 1020

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = -1

Query: 418  PLTSLQWLASVLLGLVGMPIAVVVKLIPVGS 326
            PL   QWL S++LG +GMP+A  +K+IPVGS
Sbjct: 989  PLNLGQWLVSIILGFLGMPVAAALKMIPVGS 1019



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>ACA2_ARATH (O81108) Calcium-transporting ATPase 2, plasma membrane-type (EC|
            3.6.3.8) (Ca(2+)-ATPase isoform 2)
          Length = 1014

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = -1

Query: 418  PLTSLQWLASVLLGLVGMPIAVVVKLIPV 332
            PLT  QW+ S+ +G +GMPIA  +K IPV
Sbjct: 986  PLTITQWIFSIFIGFLGMPIAAGLKTIPV 1014



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>ACA7_ARATH (O64806) Putative calcium-transporting ATPase 7, plasma membrane-type|
            (EC 3.6.3.8) (Ca(2+)-ATPase isoform 7)
          Length = 1015

 Score = 37.7 bits (86), Expect = 0.011
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = -1

Query: 418  PLTSLQWLASVLLGLVGMPIAVVVKLIPV 332
            PLT +QW  S+ +G +GMPIA  +K IPV
Sbjct: 987  PLTIVQWFFSIFVGFLGMPIAAGLKKIPV 1015



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>ACA9_ARATH (Q9LU41) Putative calcium-transporting ATPase 9, plasma membrane-type|
            (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9)
          Length = 1073

 Score = 37.0 bits (84), Expect = 0.018
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = -1

Query: 400  WLASVLLGLVGMPIAVVVKLIPV 332
            WLAS+++GLV  P+A+V KLIPV
Sbjct: 1029 WLASIIIGLVSWPLAIVGKLIPV 1051



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>CYCH_BRAJA (P45399) Cytochrome c-type biogenesis protein cycH|
          Length = 369

 Score = 35.4 bits (80), Expect = 0.054
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = -1

Query: 418 PLTSLQWL-ASVLLGLVGMPIAVVVKLIPVGSS**KGQPTMRRTRGEKTDSVVCGPESSM 242
           P +SL+W  A+ +L LVG+P+  +   +P+GS   +  P  +R RG  +     G   S+
Sbjct: 82  PKSSLKWRRAAAVLALVGLPLVAIGVYMPLGSPRLQDFPLAQRERGSGS-----GMAGSL 136

Query: 241 QGLLGCMESKPEKSCT 194
           + L+  +E   EK+ T
Sbjct: 137 ENLVVQVEQHLEKNPT 152



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>ACA4_ARATH (O22218) Calcium-transporting ATPase 4, plasma membrane-type (EC|
            3.6.3.8) (Ca(2+)-ATPase isoform 4)
          Length = 1030

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = -1

Query: 418  PLTSLQWLASVLLGLVGMPIAVVVKLIPVGSS**KGQPTMRRTRGEKTDSVVCGPESS 245
            PL+   WL S+L+G + M +AV++K +PV S          R   +  D +  GP SS
Sbjct: 980  PLSWQHWLLSILIGSLNMIVAVILKCVPVES----------RHHHDGYDLLPSGPSSS 1027



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>ACA11_ARATH (Q9M2L4) Putative calcium-transporting ATPase 11, plasma|
            membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 11)
          Length = 1025

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -1

Query: 418  PLTSLQWLASVLLGLVGMPIAVVVKLIPVGSS 323
            PL+   WL  +L+G V M +AV +K IPV S+
Sbjct: 977  PLSWQHWLLCILIGSVSMILAVGLKCIPVESN 1008



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>CP128_MYCTU (P63713) Putative cytochrome P450 128 (EC 1.14.-.-)|
          Length = 489

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +3

Query: 282 SPRVLRMVGCPFHQEDPTGMSL--TTTAIGIPTRPRST 389
           +P  +R+ GCP       G++    TTA+G+PTR R++
Sbjct: 11  APDRVRLAGCPLAGTPDVGLTAQDATTALGVPTRRRAS 48



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>CP128_MYCBO (P63714) Putative cytochrome P450 128 (EC 1.14.-.-)|
          Length = 489

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +3

Query: 282 SPRVLRMVGCPFHQEDPTGMSL--TTTAIGIPTRPRST 389
           +P  +R+ GCP       G++    TTA+G+PTR R++
Sbjct: 11  APDRVRLAGCPLAGTPDVGLTAQDATTALGVPTRRRAS 48



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>YEB6_YEAST (P39997) Hypothetical 57.4 kDa protein in PMP2-VAC8 intergenic|
           region
          Length = 493

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
 Frame = +3

Query: 279 FSPRVLRMVGCPF-----HQEDPTGMSLTTTAIGIPTRPRSTLASHWRLV 413
           F PR++     PF     +   P  M++TT    IP+ P  T  +HW +V
Sbjct: 86  FHPRLIDAKYTPFLYNLHNLRSPYDMNITTAPYMIPSFPTQTFPNHWSMV 135



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>YCR6_YEAST (P25353) Hypothetical protein YCR026C|
          Length = 742

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 20/73 (27%), Positives = 33/73 (45%)
 Frame = +3

Query: 195 VQLFSGLLSMHPKRPCMEDSGPHTTESVFSPRVLRMVGCPFHQEDPTGMSLTTTAIGIPT 374
           V+ F+G     P    +   G H   S+ S R    +   +  +   GM++T+T   +P+
Sbjct: 157 VKYFNGTHEFFPLTIVISLDGFHP--SLISKRNTPFLHDLYELKYDGGMNITSTPFMVPS 214

Query: 375 RPRSTLASHWRLV 413
            P  T  +HW LV
Sbjct: 215 FPTETFPNHWTLV 227



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>ATC1_DICDI (P54678) Probable calcium-transporting ATPase PAT1 (EC 3.6.3.-)|
          Length = 1115

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 15/68 (22%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = -1

Query: 406  LQWLASVLLGLVGMPIAVVVKLIPVGSS**KGQPTMRRTRGEKTDSVVC--GPESSMQGL 233
            ++W+  V++G + +P+ ++++ IP+       +P ++      +++V     P  S   L
Sbjct: 945  VEWICCVVVGAISLPVGLLLRKIPI------REPVVKNEIPVHSEAVYTSPSPNPSSSNL 998

Query: 232  LGCMESKP 209
            LG   +KP
Sbjct: 999  LGSGGAKP 1006



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>ACA8_ARATH (Q9LF79) Calcium-transporting ATPase 8, plasma membrane-type (EC|
            3.6.3.8) (Ca(2+)-ATPase isoform 8)
          Length = 1074

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -1

Query: 403  QWLASVLLGLVGMPIAVVVKLIPVGSS**KGQPTMRRTRGEKTDS 269
            QWL  V +G++  P+A+V K IPV ++    +  + +  G+K +S
Sbjct: 1024 QWLICVGIGVISWPLALVGKFIPVPAAPISNKLKVLKFWGKKKNS 1068



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>HMIN_DROME (P05527) Homeobox protein invected|
          Length = 576

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = +2

Query: 239 LHGGFRSTHYGIGLFAARPSHGGLPFSSGGPNRNELDDDGDRHPDEAKEHAGEPLETGE 415
           L   F S    IG  +     G +  SS G ++N  + +G+R P +A + +G+PL   +
Sbjct: 285 LKADFGSRLPKIGALSGNIGGGSVSGSSTGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQ 343



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>ATP6_LATCH (O03169) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)|
          Length = 220

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -1

Query: 400 WLASVLLGLVGMPIAVVVKLIPVGS 326
           WLA+VLLGL   P A +  L+P G+
Sbjct: 103 WLATVLLGLRNQPTAALGHLLPEGT 127



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>SPT8_YEAST (P38915) Transcription factor SPT8|
          Length = 602

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
 Frame = +2

Query: 251 FRSTHYGIGLFAARPSHGGLPFS----SGGPNRNELDDD----GDRHPDEAKEHAGEPLE 406
           F+ +   +     RP +  +  S    SG  N N  DD     GD   DE ++   EP+E
Sbjct: 345 FKKSRSELSSLEMRPLYSSVDVSGNVNSGKENENADDDMDSLFGDEDEDEKQDAGNEPVE 404

Query: 407 TGE 415
           TG+
Sbjct: 405 TGD 407



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>ACA10_ARATH (Q9SZR1) Putative calcium-transporting ATPase 10, plasma|
            membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 10)
          Length = 1069

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 400  WLASVLLGLVGMPIAVVVKLIPV 332
            WL  + +G +  P+AV+ KLIPV
Sbjct: 1027 WLVCIGIGSISWPLAVIGKLIPV 1049



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>FA98A_PONPY (Q5R679) Protein FAM98A|
          Length = 518

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
 Frame = +2

Query: 242 HGGFRSTHY---GIGLFAARPSHGGLPFSSGGPNRNELDDDGDRHPDEAKEHAG 394
           HGG  S  Y   G G F    S+ G  +  GG  ++    DG  H D      G
Sbjct: 410 HGGHSSGGYQGGGYGGFQTSSSYTGSGYQGGGYQQDNRYQDGGHHGDRGGGRGG 463



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>FA98A_HUMAN (Q8NCA5) Protein FAM98A|
          Length = 519

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
 Frame = +2

Query: 242 HGGFRSTHY---GIGLFAARPSHGGLPFSSGGPNRNELDDDGDRHPDEAKEHAG 394
           HGG  S  Y   G G F    S+ G  +  GG  ++    DG  H D      G
Sbjct: 411 HGGHSSGGYQGGGYGGFQTSSSYTGSGYQGGGYQQDNRYQDGGHHGDRGGGRGG 464



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>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)|
           (Trinucleotide repeat-containing gene 13 protein)
          Length = 1312

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 22/70 (31%), Positives = 28/70 (40%)
 Frame = -1

Query: 385 LLGLVGMPIAVVVKLIPVGSS**KGQPTMRRTRGEKTDSVVCGPESSMQGLLGCMESKPE 206
           LLGL G P   VV L+P+ S    G P    TR     +    P S      G   ++P 
Sbjct: 94  LLGLGGPPRPFVVVLLPLAS---PGAPPAAPTRASPLGARASPPRS------GVSLARPA 144

Query: 205 KSCTRQVLKP 176
             C R   +P
Sbjct: 145 PGCPRPACEP 154


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,687,314
Number of Sequences: 219361
Number of extensions: 1329518
Number of successful extensions: 3669
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3662
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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