Clone Name | rbastl05e02 |
---|---|
Clone Library Name | barley_pub |
>ACA1_ARATH (Q37145) Calcium-transporting ATPase 1, chloroplast precursor (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) Length = 1020 Score = 44.3 bits (103), Expect = 1e-04 Identities = 18/31 (58%), Positives = 24/31 (77%) Frame = -1 Query: 418 PLTSLQWLASVLLGLVGMPIAVVVKLIPVGS 326 PL QWL S++LG +GMP+A +K+IPVGS Sbjct: 989 PLNLGQWLVSIILGFLGMPVAAALKMIPVGS 1019
>ACA2_ARATH (O81108) Calcium-transporting ATPase 2, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 2) Length = 1014 Score = 38.5 bits (88), Expect = 0.006 Identities = 16/29 (55%), Positives = 21/29 (72%) Frame = -1 Query: 418 PLTSLQWLASVLLGLVGMPIAVVVKLIPV 332 PLT QW+ S+ +G +GMPIA +K IPV Sbjct: 986 PLTITQWIFSIFIGFLGMPIAAGLKTIPV 1014
>ACA7_ARATH (O64806) Putative calcium-transporting ATPase 7, plasma membrane-type| (EC 3.6.3.8) (Ca(2+)-ATPase isoform 7) Length = 1015 Score = 37.7 bits (86), Expect = 0.011 Identities = 16/29 (55%), Positives = 21/29 (72%) Frame = -1 Query: 418 PLTSLQWLASVLLGLVGMPIAVVVKLIPV 332 PLT +QW S+ +G +GMPIA +K IPV Sbjct: 987 PLTIVQWFFSIFVGFLGMPIAAGLKKIPV 1015
>ACA9_ARATH (Q9LU41) Putative calcium-transporting ATPase 9, plasma membrane-type| (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9) Length = 1073 Score = 37.0 bits (84), Expect = 0.018 Identities = 15/23 (65%), Positives = 20/23 (86%) Frame = -1 Query: 400 WLASVLLGLVGMPIAVVVKLIPV 332 WLAS+++GLV P+A+V KLIPV Sbjct: 1029 WLASIIIGLVSWPLAIVGKLIPV 1051
>CYCH_BRAJA (P45399) Cytochrome c-type biogenesis protein cycH| Length = 369 Score = 35.4 bits (80), Expect = 0.054 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Frame = -1 Query: 418 PLTSLQWL-ASVLLGLVGMPIAVVVKLIPVGSS**KGQPTMRRTRGEKTDSVVCGPESSM 242 P +SL+W A+ +L LVG+P+ + +P+GS + P +R RG + G S+ Sbjct: 82 PKSSLKWRRAAAVLALVGLPLVAIGVYMPLGSPRLQDFPLAQRERGSGS-----GMAGSL 136 Query: 241 QGLLGCMESKPEKSCT 194 + L+ +E EK+ T Sbjct: 137 ENLVVQVEQHLEKNPT 152
>ACA4_ARATH (O22218) Calcium-transporting ATPase 4, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 4) Length = 1030 Score = 34.3 bits (77), Expect = 0.12 Identities = 20/58 (34%), Positives = 30/58 (51%) Frame = -1 Query: 418 PLTSLQWLASVLLGLVGMPIAVVVKLIPVGSS**KGQPTMRRTRGEKTDSVVCGPESS 245 PL+ WL S+L+G + M +AV++K +PV S R + D + GP SS Sbjct: 980 PLSWQHWLLSILIGSLNMIVAVILKCVPVES----------RHHHDGYDLLPSGPSSS 1027
>ACA11_ARATH (Q9M2L4) Putative calcium-transporting ATPase 11, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 11) Length = 1025 Score = 31.2 bits (69), Expect = 1.0 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = -1 Query: 418 PLTSLQWLASVLLGLVGMPIAVVVKLIPVGSS 323 PL+ WL +L+G V M +AV +K IPV S+ Sbjct: 977 PLSWQHWLLCILIGSVSMILAVGLKCIPVESN 1008
>CP128_MYCTU (P63713) Putative cytochrome P450 128 (EC 1.14.-.-)| Length = 489 Score = 30.8 bits (68), Expect = 1.3 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Frame = +3 Query: 282 SPRVLRMVGCPFHQEDPTGMSL--TTTAIGIPTRPRST 389 +P +R+ GCP G++ TTA+G+PTR R++ Sbjct: 11 APDRVRLAGCPLAGTPDVGLTAQDATTALGVPTRRRAS 48
>CP128_MYCBO (P63714) Putative cytochrome P450 128 (EC 1.14.-.-)| Length = 489 Score = 30.8 bits (68), Expect = 1.3 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Frame = +3 Query: 282 SPRVLRMVGCPFHQEDPTGMSL--TTTAIGIPTRPRST 389 +P +R+ GCP G++ TTA+G+PTR R++ Sbjct: 11 APDRVRLAGCPLAGTPDVGLTAQDATTALGVPTRRRAS 48
>YEB6_YEAST (P39997) Hypothetical 57.4 kDa protein in PMP2-VAC8 intergenic| region Length = 493 Score = 30.8 bits (68), Expect = 1.3 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Frame = +3 Query: 279 FSPRVLRMVGCPF-----HQEDPTGMSLTTTAIGIPTRPRSTLASHWRLV 413 F PR++ PF + P M++TT IP+ P T +HW +V Sbjct: 86 FHPRLIDAKYTPFLYNLHNLRSPYDMNITTAPYMIPSFPTQTFPNHWSMV 135
>YCR6_YEAST (P25353) Hypothetical protein YCR026C| Length = 742 Score = 30.4 bits (67), Expect = 1.7 Identities = 20/73 (27%), Positives = 33/73 (45%) Frame = +3 Query: 195 VQLFSGLLSMHPKRPCMEDSGPHTTESVFSPRVLRMVGCPFHQEDPTGMSLTTTAIGIPT 374 V+ F+G P + G H S+ S R + + + GM++T+T +P+ Sbjct: 157 VKYFNGTHEFFPLTIVISLDGFHP--SLISKRNTPFLHDLYELKYDGGMNITSTPFMVPS 214 Query: 375 RPRSTLASHWRLV 413 P T +HW LV Sbjct: 215 FPTETFPNHWTLV 227
>ATC1_DICDI (P54678) Probable calcium-transporting ATPase PAT1 (EC 3.6.3.-)| Length = 1115 Score = 29.6 bits (65), Expect = 2.9 Identities = 15/68 (22%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = -1 Query: 406 LQWLASVLLGLVGMPIAVVVKLIPVGSS**KGQPTMRRTRGEKTDSVVC--GPESSMQGL 233 ++W+ V++G + +P+ ++++ IP+ +P ++ +++V P S L Sbjct: 945 VEWICCVVVGAISLPVGLLLRKIPI------REPVVKNEIPVHSEAVYTSPSPNPSSSNL 998 Query: 232 LGCMESKP 209 LG +KP Sbjct: 999 LGSGGAKP 1006
>ACA8_ARATH (Q9LF79) Calcium-transporting ATPase 8, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 8) Length = 1074 Score = 29.6 bits (65), Expect = 2.9 Identities = 15/45 (33%), Positives = 27/45 (60%) Frame = -1 Query: 403 QWLASVLLGLVGMPIAVVVKLIPVGSS**KGQPTMRRTRGEKTDS 269 QWL V +G++ P+A+V K IPV ++ + + + G+K +S Sbjct: 1024 QWLICVGIGVISWPLALVGKFIPVPAAPISNKLKVLKFWGKKKNS 1068
>HMIN_DROME (P05527) Homeobox protein invected| Length = 576 Score = 29.3 bits (64), Expect = 3.8 Identities = 17/59 (28%), Positives = 29/59 (49%) Frame = +2 Query: 239 LHGGFRSTHYGIGLFAARPSHGGLPFSSGGPNRNELDDDGDRHPDEAKEHAGEPLETGE 415 L F S IG + G + SS G ++N + +G+R P +A + +G+PL + Sbjct: 285 LKADFGSRLPKIGALSGNIGGGSVSGSSTGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQ 343
>ATP6_LATCH (O03169) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)| Length = 220 Score = 29.3 bits (64), Expect = 3.8 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -1 Query: 400 WLASVLLGLVGMPIAVVVKLIPVGS 326 WLA+VLLGL P A + L+P G+ Sbjct: 103 WLATVLLGLRNQPTAALGHLLPEGT 127
>SPT8_YEAST (P38915) Transcription factor SPT8| Length = 602 Score = 28.9 bits (63), Expect = 5.0 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 8/63 (12%) Frame = +2 Query: 251 FRSTHYGIGLFAARPSHGGLPFS----SGGPNRNELDDD----GDRHPDEAKEHAGEPLE 406 F+ + + RP + + S SG N N DD GD DE ++ EP+E Sbjct: 345 FKKSRSELSSLEMRPLYSSVDVSGNVNSGKENENADDDMDSLFGDEDEDEKQDAGNEPVE 404 Query: 407 TGE 415 TG+ Sbjct: 405 TGD 407
>ACA10_ARATH (Q9SZR1) Putative calcium-transporting ATPase 10, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 10) Length = 1069 Score = 28.5 bits (62), Expect = 6.6 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 Query: 400 WLASVLLGLVGMPIAVVVKLIPV 332 WL + +G + P+AV+ KLIPV Sbjct: 1027 WLVCIGIGSISWPLAVIGKLIPV 1049
>FA98A_PONPY (Q5R679) Protein FAM98A| Length = 518 Score = 28.1 bits (61), Expect = 8.6 Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 3/54 (5%) Frame = +2 Query: 242 HGGFRSTHY---GIGLFAARPSHGGLPFSSGGPNRNELDDDGDRHPDEAKEHAG 394 HGG S Y G G F S+ G + GG ++ DG H D G Sbjct: 410 HGGHSSGGYQGGGYGGFQTSSSYTGSGYQGGGYQQDNRYQDGGHHGDRGGGRGG 463
>FA98A_HUMAN (Q8NCA5) Protein FAM98A| Length = 519 Score = 28.1 bits (61), Expect = 8.6 Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 3/54 (5%) Frame = +2 Query: 242 HGGFRSTHY---GIGLFAARPSHGGLPFSSGGPNRNELDDDGDRHPDEAKEHAG 394 HGG S Y G G F S+ G + GG ++ DG H D G Sbjct: 411 HGGHSSGGYQGGGYGGFQTSSSYTGSGYQGGGYQQDNRYQDGGHHGDRGGGRGG 464
>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)| (Trinucleotide repeat-containing gene 13 protein) Length = 1312 Score = 28.1 bits (61), Expect = 8.6 Identities = 22/70 (31%), Positives = 28/70 (40%) Frame = -1 Query: 385 LLGLVGMPIAVVVKLIPVGSS**KGQPTMRRTRGEKTDSVVCGPESSMQGLLGCMESKPE 206 LLGL G P VV L+P+ S G P TR + P S G ++P Sbjct: 94 LLGLGGPPRPFVVVLLPLAS---PGAPPAAPTRASPLGARASPPRS------GVSLARPA 144 Query: 205 KSCTRQVLKP 176 C R +P Sbjct: 145 PGCPRPACEP 154 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,687,314 Number of Sequences: 219361 Number of extensions: 1329518 Number of successful extensions: 3669 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 3449 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3662 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)