>EXOC4_ARATH (Q93YU5) Probable exocyst complex component 4 (Exocyst complex|
            component Sec8)
          Length = 1053

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = -3

Query: 382  YLSILKVNVPGREIPMDAERRISQILGH 299
            Y ++LKVNVPGR+ P DA+ R+ +IL H
Sbjct: 1026 YSNLLKVNVPGRDTPSDAQSRLLEILSH 1053

>Y13L_BPT4 (P39505) Hypothetical 9.4 kDa protein in nrdB-nrdA intergenic|
           region
          Length = 83

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = +2

Query: 62  LHPKYHTFTRIKNKRSIQNTTNLLSMRQQIVHYLPICRHQKKKPNRNNKINYSYKESR 235
           L+P Y T +  ++    + T +L+S+R +     P C H  KK N+ N + + Y + +
Sbjct: 21  LNPMYGTISPTRDVPHTKETRDLISLRTKQGAEYPPCPHCGKKVNKGNALRWHYDKCK 78

>WNT4_DROME (P40589) Protein Wnt-4 precursor (dWnt-4)|
          Length = 539

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +2

Query: 80  TFTRIKNKRSIQNTTNLLSMRQQIVHYLPICRHQKKKPNRNNKINYSYKESRGRYC 247
           T  R K   +I+   N  SMRQ     +   + ++KKP ++      Y E+   YC
Sbjct: 423 TLLRQKYNEAIRKAPNQRSMRQVSSSRMKKPKQRRKKPQQSQYTTLYYLETSPSYC 478

>DPO3_CLOTE (Q895K2) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1427

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
 Frame = +2

Query: 56  LKLHPKYHTFTRIKNKRSIQNTTNLLSMRQQIVHYLPICRHQKKKPNRNNKINYSYKESR 235
           +K  P YH    +KNK  ++N   L+S             H  KKP     +   Y+E  
Sbjct: 596 IKKSPTYHVIILVKNKIGLKNLYKLISESH--------LNHFYKKPRMPKSLINKYREGL 647

Query: 236 --GRYCE 250
             G  CE
Sbjct: 648 MIGSACE 654

>ENV_HV1Z3 (P12491) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120)]
          Length = 460

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
 Frame = +1

Query: 4   ITCGC----NNLNNKTHESDFVKITPKISHIYKDQE*AFHSKYHKFTV---NETTNSTL 159
           +T  C    N+ NN T E+     + K+    KD+    H+ ++K  V   N T NS++
Sbjct: 126 VTLNCIDVKNSTNNNTEEATITNCSFKVPTELKDKTETVHTLFYKLDVVPLNVTNNSSI 184

>SELD_DICDI (Q94497) Selenide, water dikinase (EC 2.7.9.3) (Selenophosphate|
           synthetase) (Selenium donor protein) (Fragment)
          Length = 370

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
 Frame = +2

Query: 77  HTFTRIKNKRSIQNTTNL-----LSMRQQIVHYLPICRHQKKKPNRNNKINYSYKESRGR 241
           H  T +     + ++TNL     L +R +I H LPI +H KK     + +N+ +K  +G 
Sbjct: 275 HAATDVTGFGILGHSTNLAQNQLLPIRFEI-HTLPIIKHMKK---LEDHLNHPFKLLKGT 330

Query: 242 YCETS 256
             ETS
Sbjct: 331 SAETS 335

>HFA1_YEAST (P32874) Protein HFA1|
          Length = 2273

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 29   ITKHTSLILLKLHPKYHTFTRIKNKRSIQNTTNLLSMRQQ 148
            +  H   I LKL  KY+   +I     I    NLL++R++
Sbjct: 981  LANHECEIFLKLIKKYYAVEKIFENHDIHEERNLLNLRRK 1020

>KRIT1_BOVIN (Q6TNJ1) Krev interaction trapped protein 1 (Krev interaction|
           trapped 1) (Cerebral cavernous malformations 1 protein
           homolog)
          Length = 736

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = +2

Query: 35  KHTSLILLKLHPKYHTFTRIKNKRSIQNTTNLLSMRQQIVHYLPICRHQKKKPNRNNKIN 214
           K  +L  L L   Y  +   K+K+   N  NL S+       +PI + + K P+  N+I 
Sbjct: 550 KLITLASLLLQIVYGNYESKKHKQGFLNEENLKSI-------VPITKLKSKAPHWTNRIL 602

Query: 215 YSYK 226
           + YK
Sbjct: 603 HEYK 606

>RPC1_PLAFA (P27625) DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)|
          Length = 2339

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +2

Query: 107  SIQNTTNLLSMRQQIVHYLPICRHQKKKPNRNNKIN 214
            SI ++  LLS + +I  YLP  +HQ K  N NN  N
Sbjct: 1042 SISSSHLLLSYKNKIP-YLPHVQHQNKTSNMNNIYN 1076


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,158,816
Number of Sequences: 219361
Number of extensions: 737359
Number of successful extensions: 1696
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1694
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)