>SYY_NEIMB (Q9JXY5) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 431

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +3

Query: 168 GHLLPLLSTREFFNAGLFMLLPEVPLAAPNFLTGLCNDVQF 290
           GHLLP+L+ R F  AG        P+A     TG+  D  F
Sbjct: 47  GHLLPVLALRRFQQAG------HTPIALVGGATGMIGDPSF 81

>SYY_NEIMA (Q9JVY6) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 431

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +3

Query: 168 GHLLPLLSTREFFNAGLFMLLPEVPLAAPNFLTGLCNDVQF 290
           GHLLP+L+ R F  AG        P+A     TG+  D  F
Sbjct: 47  GHLLPVLALRRFQQAG------HTPIALVGGATGMIGDPSF 81

>SYY_NEIG1 (Q5FAF7) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 431

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +3

Query: 168 GHLLPLLSTREFFNAGLFMLLPEVPLAAPNFLTGLCNDVQF 290
           GHLLP+L+ R F  AG        P+A     TG+  D  F
Sbjct: 47  GHLLPVLALRRFQQAG------HTPIALVGGATGMIGDPSF 81

>PROB_SYNEL (Q8DH42) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 369

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +1

Query: 127 RKGEIALCSNSQYLVIYCHCSPRGNFLML 213
           ++G +AL + +Q + + CHC  RG+ ++L
Sbjct: 18  KEGNLALATIAQLVEVLCHCQRRGDRVVL 46

>PIF3_ARATH (O80536) Phytochrome-interacting factor 3 (Phytochrome-associated|
           protein 3) (Basic helix-loop-helix protein 8) (bHLH8)
           (AtbHLH008)
          Length = 524

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 195 REFFNAGLFMLLPEVPLAAPNFLTGLCNDVQF 290
           RE  N     ++ E+P++ P+ +TGL  D  F
Sbjct: 62  REIGNGSKTTMVDEIPMSVPSLMTGLSQDDDF 93

>YAG5_STAAU (P55177) Hypothetical UPF0012 protein in agr operon (EC 3.5.-.-)|
           (ORF 5)
          Length = 261

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 171 HLLPLLSTREFFNAGLFMLLPEVPLAAPNFLTGL-CNDVQFWEI 299
           HL+P+L   EF  AG ++  P   L+   ++T L C D++F E+
Sbjct: 112 HLVPMLREHEFLTAGEYVAEP-FQLSDGTYVTQLICYDLRFPEL 154

>SODCP_LYCES (P14831) Superoxide dismutase [Cu-Zn], chloroplast precursor (EC|
           1.15.1.1)
          Length = 217

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 105 HSIW*SYAVTGYGLFPFSASSNSKGANESF 16
           HSI+ + + T   L+P S+SS+S   N SF
Sbjct: 4   HSIFTTTSTTNSFLYPISSSSSSPNINSSF 33

>T2P2_NEIGO (P24617) Type II restriction enzyme NgoPII (EC 3.1.21.4)|
           (Endonuclease NgoPII) (R.NgoPII)
          Length = 278

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 255 NFLTGLCNDVQFWEICSLIFLIGIISSR 338
           + LT  C D + WE   +I+++G++  +
Sbjct: 110 SMLTKACKDAEKWEEKDIIYIVGVVDKK 137


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,677,993
Number of Sequences: 219361
Number of extensions: 818830
Number of successful extensions: 1883
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1883
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)