>emb|AL021172.2|CEY17G7A Caenorhabditis elegans YAC Y17G7A, complete sequence
          Length = 13509

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 70    tttaggaaagtacaaaaatat 90
             |||||||||||||||||||||
Sbjct: 10061 tttaggaaagtacaaaaatat 10081

>emb|Z93020.1|HS503G16 Human DNA sequence from clone RP3-503G16 on chromosome 6p23 Contains
             the 5' end of the RANBP9 gene for RAN binding protein 9
             (RanBPM) and three CpG islands, complete sequence
          Length = 125686

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    tacagaaattatataagttat 64
             |||||||||||||||||||||
Sbjct: 61118 tacagaaattatataagttat 61138

>emb|AL390206.14| Human DNA sequence from clone RP11-478K7 on chromosome 10 Contains a
             small nuclear ribonucleoprotein D2 polypeptide 16.5kDa
             (SNRPD2) pseudogene and a novel gene (FLJ35900), complete
             sequence
          Length = 113039

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 6     acataaatctaaaacctcaaa 26
             |||||||||||||||||||||
Sbjct: 51825 acataaatctaaaacctcaaa 51845

>gb|AC074250.6| Homo sapiens BAC clone RP11-622A1 from 4, complete sequence
          Length = 199331

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 6     acataaatctaaaacctcaaattct 30
             |||||||||||| ||||||||||||
Sbjct: 56718 acataaatctaagacctcaaattct 56694

>gb|AC147595.10| Mus musculus strain RIII clone mgsriii-p1_7 map 6, complete sequence
          Length = 90946

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     gtgcacataaatctaaaacc 21
             ||||||||||||||||||||
Sbjct: 74551 gtgcacataaatctaaaacc 74532

>gb|AC151843.3| Mus musculus BAC clone RP23-88K14 from chromosome 10, complete sequence
          Length = 268516

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   tcgtgggtaccaccagactg 334
             ||||||||||||||||||||
Sbjct: 40051 tcgtgggtaccaccagactg 40070

>gb|AC160400.12| Mus musculus 6 BAC RP23-321M22 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 219634

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    gtgcacataaatctaaaacc 21
            ||||||||||||||||||||
Sbjct: 1789 gtgcacataaatctaaaacc 1770

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 166     ttctcccctcctcgaacacc 185
               ||||||||||||||||||||
Sbjct: 2461585 ttctcccctcctcgaacacc 2461604

>gb|AC185995.2| Pan troglodytes BAC clone CH251-277I3 from chromosome 2, complete
              sequence
          Length = 161457

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     gttttaggaaagtacaaaaa 87
              ||||||||||||||||||||
Sbjct: 141156 gttttaggaaagtacaaaaa 141137

>gb|AC115297.7| Mus musculus BAC clone RP23-205H11 from chromosome 10, complete sequence
          Length = 171350

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 10     aaatctaaaacctcaaattctaag 33
              |||||||||| |||||||||||||
Sbjct: 123313 aaatctaaaatctcaaattctaag 123336

>emb|CR855393.22| Zebrafish DNA sequence from clone DKEY-201L21 in linkage group 5,
              complete sequence
          Length = 226943

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     agtttacagaaattatataa 59
              ||||||||||||||||||||
Sbjct: 151920 agtttacagaaattatataa 151939

>emb|Z93384.1|CEH08M01 Caenorhabditis elegans Fosmid H08M01, complete sequence
          Length = 31268

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   cagaaattatataagttatt 65
            ||||||||||||||||||||
Sbjct: 6833 cagaaattatataagttatt 6814

>gb|AC124573.4| Mus musculus BAC clone RP23-159F13 from 10, complete sequence
          Length = 191206

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   tcgtgggtaccaccagactg 334
             ||||||||||||||||||||
Sbjct: 95505 tcgtgggtaccaccagactg 95524

>emb|AL590085.4| Human DNA sequence from clone RP11-135G16 on chromosome 1 Contains part
             of the XPR1 gene for xenotropic and polytropic retrovirus
             receptor, complete sequence
          Length = 84057

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     tgcacataaatctaaaacct 22
             ||||||||||||||||||||
Sbjct: 43044 tgcacataaatctaaaacct 43025

>emb|AL163544.24| Human DNA sequence from clone RP11-322A14 on chromosome 13, complete
             sequence
          Length = 60286

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   cttgagaaatccagatacag 146
             ||||||||||||||||||||
Sbjct: 49355 cttgagaaatccagatacag 49374

>emb|CR392045.5| Zebrafish DNA sequence from clone DKEY-167C9 in linkage group 3,
             complete sequence
          Length = 152453

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    aaaatatgctctgatcttct 103
             ||||||||||||||||||||
Sbjct: 47820 aaaatatgctctgatcttct 47801

>gb|AC107394.3| Homo sapiens BAC clone RP11-617I14 from 4, complete sequence
          Length = 170971

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 64   ttatgttttaggaaagtacaaaaa 87
            |||||||||||||||||| |||||
Sbjct: 9980 ttatgttttaggaaagtagaaaaa 9957

>gb|AF156973.1| Homo sapiens nasopharyngeal carcinoma down-regulated protein (NPCDRG)
            mRNA, complete cds
          Length = 2436

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   aattctaaggagttcagttt 44
            ||||||||||||||||||||
Sbjct: 1489 aattctaaggagttcagttt 1470

>emb|BX537143.5| Zebrafish DNA sequence from clone CH211-86H15 in linkage group 11,
              complete sequence
          Length = 204606

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     attatataagttattatgtt 70
              ||||||||||||||||||||
Sbjct: 201988 attatataagttattatgtt 202007

>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 99      cttctgaagtcgacactgtggaag 122
               ||||||||| ||||||||||||||
Sbjct: 1534265 cttctgaaggcgacactgtggaag 1534288

>gb|AC099780.2| Homo sapiens chromosome 3 clone RP11-769M23, complete sequence
          Length = 193793

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    aattctaaggagttcagttt 44
             ||||||||||||||||||||
Sbjct: 80363 aattctaaggagttcagttt 80382

>gb|AC068515.6| Homo sapiens, clone RP11-61O11, complete sequence
          Length = 180917

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  cgacactgtggaagggaact 128
            ||||||||||||||||||||
Sbjct: 2197 cgacactgtggaagggaact 2216

>gb|AC027013.7| Homo sapiens chromosome 15, clone RP11-398J10, complete sequence
          Length = 196215

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    cgacactgtggaagggaact 128
              ||||||||||||||||||||
Sbjct: 111350 cgacactgtggaagggaact 111369

>gb|AC026843.9| Homo sapiens chromosome 11, clone RP11-261E12, complete sequence
          Length = 166287

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     taaatctaaaacctcaaatt 28
             ||||||||||||||||||||
Sbjct: 61102 taaatctaaaacctcaaatt 61083

>ref|XR_001226.1| PREDICTED: Homo sapiens nasopharyngeal carcinoma, down-regulated 1
            (NPCDR1), misc RNA
          Length = 2640

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   aattctaaggagttcagttt 44
            ||||||||||||||||||||
Sbjct: 1716 aattctaaggagttcagttt 1697

>ref|XR_001027.1| PREDICTED: Homo sapiens nasopharyngeal carcinoma, down-regulated 1
            (NPCDR1), misc RNA
          Length = 2640

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   aattctaaggagttcagttt 44
            ||||||||||||||||||||
Sbjct: 1716 aattctaaggagttcagttt 1697

>gb|AC024132.7| Homo sapiens BAC clone RP11-415C15 from 4, complete sequence
          Length = 151552

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 28     tctaaggagttcagtttacagaaa 51
              ||||||||||| ||||||||||||
Sbjct: 116864 tctaaggagtttagtttacagaaa 116841

>dbj|AK156347.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830017H18 product:unclassifiable, full
            insert sequence
          Length = 1532

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 2    gtgcacataaatctaaaacc 21
            ||||||||||||||||||||
Sbjct: 1373 gtgcacataaatctaaaacc 1354

>gb|AF134979.1|AF134979 Homo sapiens nasopharyngeal carcinoma-related protein (NPCR) mRNA,
            complete cds
          Length = 2435

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 25   aattctaaggagttcagttt 44
            ||||||||||||||||||||
Sbjct: 1488 aattctaaggagttcagttt 1469

>gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, complete sequence
          Length = 143516

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 26   attctaaggagttcagtttacaga 49
            ||||||||||||||||| ||||||
Sbjct: 5263 attctaaggagttcagtatacaga 5240

>gb|AC108733.4| Homo sapiens 3 BAC RP11-789F5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 171184

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     taaatctaaaacctcaaatt 28
             ||||||||||||||||||||
Sbjct: 11941 taaatctaaaacctcaaatt 11922

>gb|AC000003.1|AC000003 Homo sapiens chromosome 17, clone 104H12, complete sequence
          Length = 122228

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 26    attctaaggagttcagtttacaga 49
             ||||||||||||||||| ||||||
Sbjct: 17614 attctaaggagttcagtatacaga 17637

>emb|CT571252.9| Mouse DNA sequence from clone RP24-91J7 on chromosome 12, complete
             sequence
          Length = 189925

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    taaaacctcaaattctaagg 34
             ||||||||||||||||||||
Sbjct: 27043 taaaacctcaaattctaagg 27024

>gb|AC104324.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-177j21, complete
              sequence
          Length = 193277

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      gtgcacataaatctaaaacc 21
              ||||||||||||||||||||
Sbjct: 112498 gtgcacataaatctaaaacc 112479

>gb|AC134899.4| Mus musculus BAC clone RP24-81B7 from 6, complete sequence
          Length = 197316

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     gtgcacataaatctaaaacc 21
             ||||||||||||||||||||
Sbjct: 20571 gtgcacataaatctaaaacc 20590


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,466,613
Number of Sequences: 3902068
Number of extensions: 3466613
Number of successful extensions: 64478
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64398
Number of HSP's gapped (non-prelim): 80
length of query: 416
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 394
effective length of database: 17,147,199,772
effective search space: 6755996710168
effective search space used: 6755996710168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)