>ref|NM_197073.1| Oryza sativa (japonica cultivar-group) hypothetical protein
            (OSJNBa0029C15.25), mRNA
          Length = 3759

 Score =  115 bits (58), Expect = 1e-22
 Identities = 124/146 (84%)
 Strand = Plus / Minus

                                                                        
Query: 275  ctttatattccaacatatggcgagaattgctcgcatgcaactccaaaaattcaattaaat 334
            |||||||||||||||  ||| | |||||||| |||||  ||||||| ||||||| |||||
Sbjct: 3151 ctttatattccaacaggtggggtgaattgctagcatgagactccaagaattcaaataaat 3092

                                                                        
Query: 335  tacccacagaaattcctccttcatacgatattgcacttttgttctccgccggaaaaagca 394
            ||   || |||||||||| |||||| |||||||||||||||||||| |||||||||| ||
Sbjct: 3091 tagaaactgaaattcctctttcatatgatattgcacttttgttctctgccggaaaaaaca 3032

                                      
Query: 395  acaccgtaggataaaactcctccttg 420
            |||  || ||||||  ||||||||||
Sbjct: 3031 acaatgtgggataacgctcctccttg 3006

>dbj|AK101467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040I16, full
            insert sequence
          Length = 2109

 Score =  115 bits (58), Expect = 1e-22
 Identities = 124/146 (84%)
 Strand = Plus / Minus

                                                                        
Query: 275  ctttatattccaacatatggcgagaattgctcgcatgcaactccaaaaattcaattaaat 334
            |||||||||||||||  ||| | |||||||| |||||  ||||||| ||||||| |||||
Sbjct: 1280 ctttatattccaacaggtggggtgaattgctagcatgagactccaagaattcaaataaat 1221

                                                                        
Query: 335  tacccacagaaattcctccttcatacgatattgcacttttgttctccgccggaaaaagca 394
            ||   || |||||||||| |||||| |||||||||||||||||||| |||||||||| ||
Sbjct: 1220 tagaaactgaaattcctctttcatatgatattgcacttttgttctctgccggaaaaaaca 1161

                                      
Query: 395  acaccgtaggataaaactcctccttg 420
            |||  || ||||||  ||||||||||
Sbjct: 1160 acaatgtgggataacgctcctccttg 1135

>dbj|AK063971.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-B05, full
            insert sequence
          Length = 2861

 Score =  115 bits (58), Expect = 1e-22
 Identities = 124/146 (84%)
 Strand = Plus / Minus

                                                                        
Query: 275  ctttatattccaacatatggcgagaattgctcgcatgcaactccaaaaattcaattaaat 334
            |||||||||||||||  ||| | |||||||| |||||  ||||||| ||||||| |||||
Sbjct: 1961 ctttatattccaacaggtggggtgaattgctagcatgagactccaagaattcaaataaat 1902

                                                                        
Query: 335  tacccacagaaattcctccttcatacgatattgcacttttgttctccgccggaaaaagca 394
            ||   || |||||||||| |||||| |||||||||||||||||||| |||||||||| ||
Sbjct: 1901 tagaaactgaaattcctctttcatatgatattgcacttttgttctctgccggaaaaaaca 1842

                                      
Query: 395  acaccgtaggataaaactcctccttg 420
            |||  || ||||||  ||||||||||
Sbjct: 1841 acaatgtgggataacgctcctccttg 1816

>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete
              sequence
          Length = 148816

 Score =  111 bits (56), Expect = 2e-21
 Identities = 122/144 (84%)
 Strand = Plus / Minus

                                                                          
Query: 275    ctttatattccaacatatggcgagaattgctcgcatgcaactccaaaaattcaattaaat 334
              |||||||||||||||  ||| | |||||||| |||||  ||||||| ||||||| |||||
Sbjct: 112973 ctttatattccaacaggtggggtgaattgctagcatgagactccaagaattcaaataaat 112914

                                                                          
Query: 335    tacccacagaaattcctccttcatacgatattgcacttttgttctccgccggaaaaagca 394
              ||   || |||||||||| |||||| |||||||||||||||||||| |||||||||| ||
Sbjct: 112913 tagaaactgaaattcctctttcatatgatattgcacttttgttctctgccggaaaaaaca 112854

                                      
Query: 395    acaccgtaggataaaactcctcct 418
              |||  || ||||||  ||||||||
Sbjct: 112853 acaatgtgggataacgctcctcct 112830

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  111 bits (56), Expect = 2e-21
 Identities = 122/144 (84%)
 Strand = Plus / Plus

                                                                            
Query: 275      ctttatattccaacatatggcgagaattgctcgcatgcaactccaaaaattcaattaaat 334
                |||||||||||||||  ||| | |||||||| |||||  ||||||| ||||||| |||||
Sbjct: 17819068 ctttatattccaacaggtggggtgaattgctagcatgagactccaagaattcaaataaat 17819127

                                                                            
Query: 335      tacccacagaaattcctccttcatacgatattgcacttttgttctccgccggaaaaagca 394
                ||   || |||||||||| |||||| |||||||||||||||||||| |||||||||| ||
Sbjct: 17819128 tagaaactgaaattcctctttcatatgatattgcacttttgttctctgccggaaaaaaca 17819187

                                        
Query: 395      acaccgtaggataaaactcctcct 418
                |||  || ||||||  ||||||||
Sbjct: 17819188 acaatgtgggataacgctcctcct 17819211

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  111 bits (56), Expect = 2e-21
 Identities = 122/144 (84%)
 Strand = Plus / Plus

                                                                            
Query: 275      ctttatattccaacatatggcgagaattgctcgcatgcaactccaaaaattcaattaaat 334
                |||||||||||||||  ||| | |||||||| |||||  ||||||| ||||||| |||||
Sbjct: 17828321 ctttatattccaacaggtggggtgaattgctagcatgagactccaagaattcaaataaat 17828380

                                                                            
Query: 335      tacccacagaaattcctccttcatacgatattgcacttttgttctccgccggaaaaagca 394
                ||   || |||||||||| |||||| |||||||||||||||||||| |||||||||| ||
Sbjct: 17828381 tagaaactgaaattcctctttcatatgatattgcacttttgttctctgccggaaaaaaca 17828440

                                        
Query: 395      acaccgtaggataaaactcctcct 418
                |||  || ||||||  ||||||||
Sbjct: 17828441 acaatgtgggataacgctcctcct 17828464

>emb|AL590431.11| Human DNA sequence from clone RP11-205M9 on chromosome 1 Contains the
             5' end of the gene for nuclear pore membrane glycoprotein
             210-like (LOC91181), the TPM3 gene for tropomyosin 3, a
             novel gene, the gene for NICE-3 protein (NICE-3), the gene
             for NICE-4 protein (NICE-4) and a CpG island, complete
             sequence
          Length = 119460

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 149   ggagtagaaaacagtcaatatttg 172
             ||||||||||||||||||||||||
Sbjct: 70736 ggagtagaaaacagtcaatatttg 70759

>gb|AC113414.3| Homo sapiens chromosome 5 clone RP11-541P9, complete sequence
          Length = 166950

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 75    gtccaatattctttccttgtcggttt 100
             ||||||||||||||||||||| ||||
Sbjct: 79234 gtccaatattctttccttgtcagttt 79259

>gb|AC087341.4| Homo sapiens chromosome 8, clone RP11-381I15, complete sequence
          Length = 177835

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 403   ggataaaactcctccttgtct 423
             |||||||||||||||||||||
Sbjct: 25986 ggataaaactcctccttgtct 25966

>gb|AC122721.2| Homo sapiens chromosome 5 clone RP11-91I13, complete sequence
          Length = 137867

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 173    accattcttgtgtactcttat 193
              |||||||||||||||||||||
Sbjct: 106380 accattcttgtgtactcttat 106400

>gb|AC021118.6| Homo sapiens BAC clone RP11-332D24 from 4, complete sequence
          Length = 194612

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 153   tagaaaacagtcaatatttga 173
             |||||||||||||||||||||
Sbjct: 25438 tagaaaacagtcaatatttga 25458

>gb|AC010596.8| Homo sapiens chromosome 5 clone CTC-483B24, complete sequence
          Length = 165193

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 173   accattcttgtgtactcttat 193
             |||||||||||||||||||||
Sbjct: 22461 accattcttgtgtactcttat 22481

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 274     tctttatattccaacatatgg 294
               |||||||||||||||||||||
Sbjct: 3417057 tctttatattccaacatatgg 3417037

>emb|AJ325864.1|HSA325864 Homo sapiens genomic sequence surrounding NotI site, clone NR5-200C
          Length = 751

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 319 aaaaattcaattaaattaccc 339
           |||||||||||||||||||||
Sbjct: 684 aaaaattcaattaaattaccc 704

>dbj|AP005887.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1252A6, complete
             sequence
          Length = 149431

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 403   ggataaaactcctccttgtct 423
             |||||||||||||||||||||
Sbjct: 91419 ggataaaactcctccttgtct 91399

>ref|XM_611725.2| PREDICTED: Bos taurus similar to TPA regulated locus (LOC532600),
            mRNA
          Length = 1803

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  aacagtcaatatttgaccat 177
            ||||||||||||||||||||
Sbjct: 1679 aacagtcaatatttgaccat 1698

>emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segment 5/6
          Length = 305600

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    gttttgtactccctctttat 280
              ||||||||||||||||||||
Sbjct: 182369 gttttgtactccctctttat 182388

>emb|AL590731.12| Human DNA sequence from clone RP11-149M6 on chromosome 6, complete
              sequence
          Length = 149389

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 385    ggaaaaagcaacaccgtagg 404
              ||||||||||||||||||||
Sbjct: 112539 ggaaaaagcaacaccgtagg 112520

>emb|BX842643.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence;
              segment 2/4
          Length = 346939

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    tttagcttgatcttgatcta 238
              ||||||||||||||||||||
Sbjct: 101532 tttagcttgatcttgatcta 101513

>emb|BX322647.12| Zebrafish DNA sequence from clone DKEYP-86F8 in linkage group 1, complete
              sequence
          Length = 216540

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 313    aactccaaaaattcaattaaatta 336
              ||||||||||||| ||||||||||
Sbjct: 125540 aactccaaaaattaaattaaatta 125563

>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome
          Length = 1010023

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 219    tttagcttgatcttgatcta 238
              ||||||||||||||||||||
Sbjct: 702160 tttagcttgatcttgatcta 702179

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 154     agaaaacagtcaatatttgaccat 177
               |||||| |||||||||||||||||
Sbjct: 8794936 agaaaagagtcaatatttgaccat 8794913

>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 382     gccggaaaaagcaacaccgt 401
               ||||||||||||||||||||
Sbjct: 2001812 gccggaaaaagcaacaccgt 2001793

>gb|AC011716.7|AC011716 Homo sapiens chromosome 8 clone RP11-65D13, complete sequence
          Length = 172327

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   agaaatgggggagtagaaaa 159
             ||||||||||||||||||||
Sbjct: 82745 agaaatgggggagtagaaaa 82726

>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0699D11
          Length = 140825

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 154    agaaaacagtcaatatttgaccat 177
              |||||| |||||||||||||||||
Sbjct: 112393 agaaaagagtcaatatttgaccat 112370

>dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0469E09
          Length = 146081

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   agaaaacagtcaatatttgaccat 177
             |||||| |||||||||||||||||
Sbjct: 30964 agaaaagagtcaatatttgaccat 30941

>gb|U00089.2| Mycoplasma pneumoniae M129, complete genome
          Length = 816394

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    aactccaaaaattcaattaa 332
              ||||||||||||||||||||
Sbjct: 637021 aactccaaaaattcaattaa 637002


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,322,315
Number of Sequences: 3902068
Number of extensions: 4322315
Number of successful extensions: 80758
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80561
Number of HSP's gapped (non-prelim): 197
length of query: 432
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 410
effective length of database: 17,147,199,772
effective search space: 7030351906520
effective search space used: 7030351906520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)