>emb|BX649247.9| Zebrafish DNA sequence from clone DKEY-181C10 in linkage group 15,
             complete sequence
          Length = 194916

 Score = 40.1 bits (20), Expect = 0.78
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    gatccaaaacagggaccaaa 33
             ||||||||||||||||||||
Sbjct: 39467 gatccaaaacagggaccaaa 39448

>gb|AC006337.5| Homo sapiens BAC clone RP11-535N23 from 7, complete sequence
          Length = 172291

 Score = 40.1 bits (20), Expect = 0.78
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     cagggaccaaaggggtcatc 42
              ||||||||||||||||||||
Sbjct: 169595 cagggaccaaaggggtcatc 169576

>emb|AL592104.6| Human DNA sequence from clone RP11-428K13 on chromosome 1 Contains a
             pseudogene similar to part of caspase 3 apoptosis-related
             cysteine protease (CASP3), complete sequence
          Length = 131489

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     cagcaacagagatccaaaa 22
             |||||||||||||||||||
Sbjct: 98261 cagcaacagagatccaaaa 98243

>gb|AF039507.1|AF039507 HIV-2 isolate PO9 clone G8.1 from Portugal, gag protein (gag) gene,
           partial cds
          Length = 781

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 19  aaaacagggaccaaaggggtcat 41
           ||||||||||||||||| |||||
Sbjct: 751 aaaacagggaccaaaggagtcat 773

>gb|AC182701.2| Populus trichocarpa clone Pop1-74K8, complete sequence
          Length = 93140

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    atccaaaacagggaccaaa 33
             |||||||||||||||||||
Sbjct: 22291 atccaaaacagggaccaaa 22309

>gb|AF025345.1|AF025345 HIV-2 isolate SP386 CD2.6 clone from Spain, gag protein (gag) gene,
           partial cds
          Length = 781

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 19  aaaacagggaccaaaggggtcat 41
           ||||||||||||||||| |||||
Sbjct: 751 aaaacagggaccaaaggagtcat 773

>gb|AF025344.1|AF025344 HIV-2 isolate SP139 CS14.3 clone from Spain, gag protein (gag)
           gene, partial cds
          Length = 781

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 19  aaaacagggaccaaaggggtcat 41
           ||||||||||||||||| |||||
Sbjct: 751 aaaacagggaccaaaggagtcat 773

>gb|AC154659.2| Mus musculus BAC clone RP24-269K6 from chromosome 17, complete sequence
          Length = 177071

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      acagcaacagagatccaaa 21
              |||||||||||||||||||
Sbjct: 150843 acagcaacagagatccaaa 150861

>dbj|D00835.1|HIV2CAM2 Human immunodeficiency virus type 2 proviral DNA, complete genome
          Length = 11443

 Score = 38.2 bits (19), Expect = 3.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 19   aaaacagggaccaaaggggtcat 41
            ||||||||||||||||| |||||
Sbjct: 2162 aaaacagggaccaaaggagtcat 2184


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 587,350
Number of Sequences: 3902068
Number of extensions: 587350
Number of successful extensions: 39980
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39969
Number of HSP's gapped (non-prelim): 11
length of query: 76
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 55
effective length of database: 17,151,101,840
effective search space: 943310601200
effective search space used: 943310601200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)