Clone Name | rbastl05c06 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | emb|Z30243.1|SCCLHSP S.cereale (Halo) chloroplast mRNA for heat-... | 145 | 2e-32 | 2 | gb|AY324231.1| Rana catesbeiana androgen receptor mRNA, complete... | 38 | 3.8 | 3 | emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chr... | 38 | 3.8 |
---|
>emb|Z30243.1|SCCLHSP S.cereale (Halo) chloroplast mRNA for heat-shock protein Length = 2654 Score = 145 bits (73), Expect = 2e-32 Identities = 82/85 (96%) Strand = Plus / Minus Query: 5 ggatgcctacagaactaactaatctctccatgggtcattctcgttctcagtcctgacttc 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2465 ggatgcctacagaactaactaatctctccatgggtcattctcgttctcagtcctgacttc 2406 Query: 65 ggatggctcaacaacctccgttaca 89 ||||||||||| ||||||| |||| Sbjct: 2405 ggatggctcaatgacctccggtaca 2381
>gb|AY324231.1| Rana catesbeiana androgen receptor mRNA, complete cds Length = 3391 Score = 38.2 bits (19), Expect = 3.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 31 tccatgggtcattctcgttctca 53 ||||||||||||||||| ||||| Sbjct: 1700 tccatgggtcattctcggtctca 1678
>emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chromosome 11 Contains the 5' end of the gene for a novel protein (9330163N21Rik), a ribosomal protein S2 (Rps2) pseudogene, the gene for a novel protein (E130018012Rik), the gene for a novel protein (6820428D13Rik), the Mrpl27 gene for mitochondrial ribosomal protein L27, the Xylt2 gene for xylosyltransferase II, a novel gene (5330426M11Rik), the gene for a novel protein (C230057C09Rik), the gene for a novel protein similar to Cdc34 and two pseudogenes similar to hypothetical protein Tr:Q8C517, complete sequence Length = 203262 Score = 38.2 bits (19), Expect = 3.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 aaagggatgcctacagaactaac 23 ||||||| ||||||||||||||| Sbjct: 80701 aaagggaagcctacagaactaac 80723 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 524,857 Number of Sequences: 3902068 Number of extensions: 524857 Number of successful extensions: 47430 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47427 Number of HSP's gapped (non-prelim): 3 length of query: 89 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 68 effective length of database: 17,151,101,840 effective search space: 1166274925120 effective search space used: 1166274925120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)