>gb|AC148006.4| Mus musculus BAC clone RP23-298P21 from chromosome 19, complete sequence
          Length = 209327

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 320    taacaacaaacaacagaaaat 340
              |||||||||||||||||||||
Sbjct: 131852 taacaacaaacaacagaaaat 131872



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 320   taacaacaaacaacagaaaat 340
             |||||||||||||||||||||
Sbjct: 58126 taacaacaaacaacagaaaat 58146

>gb|AC121935.3| Mus musculus BAC clone RP24-207G22 from chromosome 19, complete
             sequence
          Length = 158540

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 320   taacaacaaacaacagaaaat 340
             |||||||||||||||||||||
Sbjct: 28688 taacaacaaacaacagaaaat 28668

>gb|AC116744.8| Mus musculus chromosome 19, clone RP23-79B16, complete sequence
          Length = 236661

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 320    taacaacaaacaacagaaaat 340
              |||||||||||||||||||||
Sbjct: 224916 taacaacaaacaacagaaaat 224896



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 320    taacaacaaacaacagaaaat 340
              |||||||||||||||||||||
Sbjct: 151172 taacaacaaacaacagaaaat 151152

>gb|AC113059.7| Mus musculus chromosome 10, clone RP23-255F14, complete sequence
          Length = 211296

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 321    aacaacaaacaacagaaaatg 341
              |||||||||||||||||||||
Sbjct: 165394 aacaacaaacaacagaaaatg 165414

>gb|AC021709.12| Mus musculus chromosome 10, clone RP23-194I3, complete sequence
          Length = 319367

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 321    aacaacaaacaacagaaaatg 341
              |||||||||||||||||||||
Sbjct: 256601 aacaacaaacaacagaaaatg 256621

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 28       cagtactgaaagatgaggaga 48
                |||||||||||||||||||||
Sbjct: 17720192 cagtactgaaagatgaggaga 17720172

>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0094H06
          Length = 147245

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 28     cagtactgaaagatgaggaga 48
              |||||||||||||||||||||
Sbjct: 101727 cagtactgaaagatgaggaga 101707

>gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, complete sequence
          Length = 225321

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     acagatccagatgcatacag 90
              ||||||||||||||||||||
Sbjct: 224641 acagatccagatgcatacag 224660

>gb|AY442342.1| Homo sapiens peroxisome proliferative activated receptor, delta (PPARD)
             gene, complete cds
          Length = 88955

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   ataaacttagctttacacag 189
             ||||||||||||||||||||
Sbjct: 34947 ataaacttagctttacacag 34966

>emb|BX001006.7| Zebrafish DNA sequence from clone DKEY-148M7 in linkage group 3,
             complete sequence
          Length = 193997

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   tttaacaacaaacaacagaa 337
             ||||||||||||||||||||
Sbjct: 61046 tttaacaacaaacaacagaa 61027

>emb|CR388067.9| Zebrafish DNA sequence from clone CH211-169K21 in linkage group 25,
              complete sequence
          Length = 163519

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 321    aacaacaaacaacagaaaat 340
              ||||||||||||||||||||
Sbjct: 140173 aacaacaaacaacagaaaat 140154

>emb|AL034411.6|HS808P6 Human DNA sequence from clone RP4-808P6 on chromosome Xq24 Contains the
             SLC6A14 gene for solute carrier family 6 (neurotransmitter
             transporter) member 14, complete sequence
          Length = 99271

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   caacagaaaatggggggaag 349
             ||||||||||||||||||||
Sbjct: 87070 caacagaaaatggggggaag 87051

>emb|AL022721.1|HS109F14 Human DNA sequence from clone RP1-109F14 on chromosome 6p21.2-21.3
              Contains the TEAD3 gene for TEA domain family member 3, the
              RPL10A gene for ribosomal protein RPL10a, the FANCE gene
              for Fanconi anemia, complementation group E, the PPARD gene
              for peroxisome proliferative activated receptor delta, the
              MKRNP2 pseudogene (a makorin ring finger protein pseudogene
              2) and six CpG islands, complete sequence
          Length = 170245

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    ataaacttagctttacacag 189
              ||||||||||||||||||||
Sbjct: 119919 ataaacttagctttacacag 119900

>gb|AC163635.5| Mus musculus BAC clone RP23-183F13 from chromosome 17, complete sequence
          Length = 185844

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 253    ctcagcttcagatcagctaggcac 276
              ||||| ||||||||||||||||||
Sbjct: 102720 ctcagtttcagatcagctaggcac 102697

>emb|AL591672.3| Zebrafish DNA sequence from clone BUSM1-167H12 in linkage group 14
             Contains a novel gene and two CpG islands, complete
             sequence
          Length = 95773

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   tttaacaacaaacaacagaa 337
             ||||||||||||||||||||
Sbjct: 76347 tttaacaacaaacaacagaa 76366

>gb|AC025647.9| Homo sapiens, clone RP11-316J7, complete sequence
          Length = 155663

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 172   aaacttagctttacacagggctaa 195
             |||||||||||||||||| |||||
Sbjct: 20072 aaacttagctttacacagtgctaa 20095

>gb|AC012236.12| Homo sapiens chromosome 15, clone RP11-16E12, complete sequence
          Length = 173729

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   cagccaacatggagcacaac 231
             ||||||||||||||||||||
Sbjct: 34182 cagccaacatggagcacaac 34201

>gb|AC021590.10| Homo sapiens chromosome 8, clone RP11-143H8, complete sequence
          Length = 171427

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 172    aaacttagctttacacagggctaa 195
              |||||||||||||||||| |||||
Sbjct: 148632 aaacttagctttacacagtgctaa 148655

>ref|XM_688263.1| PREDICTED: Danio rerio similar to oviductin (LOC564944), mRNA
          Length = 588

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  gtccaacagatccagatgca 85
           ||||||||||||||||||||
Sbjct: 195 gtccaacagatccagatgca 176

>gb|AC162182.2| Mus musculus BAC clone RP23-73B23 from chromosome 17, complete sequence
          Length = 205221

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 253   ctcagcttcagatcagctaggcac 276
             ||||| ||||||||||||||||||
Sbjct: 37768 ctcagtttcagatcagctaggcac 37791

>gb|AF410864.1|AF410864 Helobdella robusta HRO-SNA1 (sna1) gene, complete cds
          Length = 1149

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 319 ttaacaacaaacaacagaaa 338
           ||||||||||||||||||||
Sbjct: 577 ttaacaacaaacaacagaaa 596

>gb|AC116499.9| Mus musculus chromosome 8, clone RP24-294M17, complete sequence
          Length = 159272

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    aaggaaacaacaggcaggca 126
              ||||||||||||||||||||
Sbjct: 154352 aaggaaacaacaggcaggca 154371

>emb|CR759887.7| Zebrafish DNA sequence from clone DKEY-80C24 in linkage group 25,
             complete sequence
          Length = 215263

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    gtccaacagatccagatgca 85
             ||||||||||||||||||||
Sbjct: 94024 gtccaacagatccagatgca 94043

>gb|AC138677.8| Mus musculus chromosome 8, clone RP23-366O14, complete sequence
          Length = 208995

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   aaggaaacaacaggcaggca 126
             ||||||||||||||||||||
Sbjct: 28022 aaggaaacaacaggcaggca 28041

>dbj|AP003474.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1942A3, complete
             sequence
          Length = 165901

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 172   aaacttagctttacacagggctaa 195
             |||||||||||||||||| |||||
Sbjct: 71953 aaacttagctttacacagtgctaa 71976

>gb|AC155896.2| Medicago truncatula chromosome 2 BAC clone mth2-85c24, complete
             sequence
          Length = 132817

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    ccaacagatccagatgcata 87
             ||||||||||||||||||||
Sbjct: 90751 ccaacagatccagatgcata 90770

>gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, complete sequence
          Length = 197346

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     acagatccagatgcatacag 90
              ||||||||||||||||||||
Sbjct: 123851 acagatccagatgcatacag 123870

>emb|BX005244.12| Mouse DNA sequence from clone RP23-134F14 on chromosome X, complete
             sequence
          Length = 77526

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   cccaatctgtatgttgttga 391
             ||||||||||||||||||||
Sbjct: 41489 cccaatctgtatgttgttga 41508

>emb|AL772167.13| Mouse DNA sequence from clone RP23-203A12 on chromosome 4, complete
              sequence
          Length = 205104

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    caacaaacaacagaaaatgg 342
              ||||||||||||||||||||
Sbjct: 125724 caacaaacaacagaaaatgg 125743

>gb|AC153498.17| Mus musculus 10 BAC RP23-353P23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 192394

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   taacaacaaacaacagaaaa 339
             ||||||||||||||||||||
Sbjct: 73925 taacaacaaacaacagaaaa 73944

>emb|CR383674.8| Zebrafish DNA sequence from clone DKEY-17G17 in linkage group 25,
              complete sequence
          Length = 212086

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 321    aacaacaaacaacagaaaat 340
              ||||||||||||||||||||
Sbjct: 180810 aacaacaaacaacagaaaat 180829

>dbj|AP004219.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1222D11, complete
              sequence
          Length = 159712

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 172    aaacttagctttacacagggctaa 195
              |||||||||||||||||| |||||
Sbjct: 133924 aaacttagctttacacagtgctaa 133947


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,197,732
Number of Sequences: 3902068
Number of extensions: 4197732
Number of successful extensions: 79521
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79444
Number of HSP's gapped (non-prelim): 77
length of query: 400
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 378
effective length of database: 17,147,199,772
effective search space: 6481641513816
effective search space used: 6481641513816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)