>TRUD_PSEAE (Q9HY04) tRNA pseudouridine synthase D (EC 5.4.99.-) (tRNA-uridine|
           isomerase D) (tRNA pseudouridylate synthase D)
          Length = 355

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
 Frame = +2

Query: 101 EIGWFSAALQNV---TQARPFFFAGHLKTR-ARQQATYLSDPPSIWGRGTIPSQSRRLEQ 268
           E  W  AA+ ++   T +R FF AG  + R AR  A  L     +WG G  PS +  L++
Sbjct: 218 EGSWNRAAVGDLLAFTDSRSFFLAGEEECRDARLAALDLHPTGPLWGEGDPPSGAGVLDR 277

Query: 269 SRTVARR 289
              +A R
Sbjct: 278 ELALAGR 284

>Y455_MYCPN (P75328) Hypothetical protein MG320 homolog (H08_orf287)|
          Length = 287

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = +2

Query: 218 SIWGRGTIPSQSRRLEQSRTVARRF 292
           ++WG   +PSQ RR +Q++T+ R F
Sbjct: 148 TVWGLSALPSQQRRYQQTQTLFRIF 172

>METL6_MOUSE (Q8BVH9) Methyltransferase-like protein 6 (EC 2.1.1.-)|
          Length = 282

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 11/60 (18%)
 Frame = -3

Query: 356 KNQQLFVTRQKENS-----------SELVDCERSDGQRSETVLTAVIGRGSCLFPRC*ED 210
           KN  LF  R   N             EL  C   +GQ+  T+L A  G G+CLFP   ED
Sbjct: 43  KNWDLFYKRNSTNFFKDRHWTTREFEELRSCREYEGQKL-TLLEAGCGVGNCLFPLLEED 101

>NUOE_MYCTU (P65573) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain E) (NDH-1, chain E)
          Length = 252

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 26/77 (33%), Positives = 35/77 (45%)
 Frame = -3

Query: 368 PLQSKNQQLFVTRQKENSSELVDCERSDGQRSETVLTAVIGRGSCLFPRC*EDQIDR*LA 189
           P+   N + F  +  E++ ELVD  RSD  ++ T       RG+   P C   Q  R LA
Sbjct: 163 PVVMVNWEFFDNQTPESARELVDSLRSDTPKAPT-------RGA---PLCGFRQTSRILA 212

Query: 188 GEPSFSSDLRKKMDGPG 138
           G P    D  +   GPG
Sbjct: 213 GLPDQRPD--EGQGGPG 227

>NUOE_MYCBO (P65574) NADH-quinone oxidoreductase chain E (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain E) (NDH-1, chain E)
          Length = 252

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 26/77 (33%), Positives = 35/77 (45%)
 Frame = -3

Query: 368 PLQSKNQQLFVTRQKENSSELVDCERSDGQRSETVLTAVIGRGSCLFPRC*EDQIDR*LA 189
           P+   N + F  +  E++ ELVD  RSD  ++ T       RG+   P C   Q  R LA
Sbjct: 163 PVVMVNWEFFDNQTPESARELVDSLRSDTPKAPT-------RGA---PLCGFRQTSRILA 212

Query: 188 GEPSFSSDLRKKMDGPG 138
           G P    D  +   GPG
Sbjct: 213 GLPDQRPD--EGQGGPG 227

>Y320_MYCGE (P47562) Hypothetical protein MG320|
          Length = 286

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 218 SIWGRGTIPSQSRRLEQSRTV 280
           S+WG   +PSQ RR +Q++T+
Sbjct: 149 SVWGLSALPSQKRRYQQTQTL 169

>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 precursor|
          Length = 839

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/64 (25%), Positives = 31/64 (48%)
 Frame = +2

Query: 83  KQPGM*EIGWFSAALQNVTQARPFFFAGHLKTRARQQATYLSDPPSIWGRGTIPSQSRRL 262
           +Q G  + G++  +LQ   Q +P ++   L+   + Q+ Y    P   G+G  P Q ++ 
Sbjct: 265 QQLGQGQQGYYPTSLQQSGQGQPGYYPTSLQQLGQGQSGYYPTSPQQPGQGQQPGQLQQP 324

Query: 263 EQSR 274
            Q +
Sbjct: 325 AQGQ 328

>GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW212 precursor|
          Length = 838

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/64 (25%), Positives = 31/64 (48%)
 Frame = +2

Query: 83  KQPGM*EIGWFSAALQNVTQARPFFFAGHLKTRARQQATYLSDPPSIWGRGTIPSQSRRL 262
           +Q G  + G++  +LQ   Q +P ++   L+   + Q+ Y    P   G+G  P Q ++ 
Sbjct: 270 QQLGQGQQGYYPTSLQQSGQGQPGYYPTSLQQLGQGQSGYYPTSPQQPGQGQQPGQLQQP 329

Query: 263 EQSR 274
            Q +
Sbjct: 330 AQGQ 333

>METX_MYCLE (O32874) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine|
           O-trans-acetylase) (Homoserine transacetylase) (HTA)
          Length = 382

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +2

Query: 161 AGHLKTRARQQATYLSDPPSIWGRGTIPSQSRRLEQSRTVARRFAH 298
           A  + T+  Q A   +DP   W  G      R  E   T+ARRFAH
Sbjct: 188 ADQIGTQTTQIAAIKTDPN--WQGGDYYETGRAPENGLTIARRFAH 231

>GLMS_BACHD (Q9KG45) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
           (L-glutamine-D-fructose-6-phosphate amidotransferase)
           (Glucosamine-6-ph
          Length = 599

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 117 VQHYKMSPRPVHFFSQVT*KRGLASKLPIYLILLASGEEARS 242
           ++++   P  VH  S+      L SK P+++ +  SGE A S
Sbjct: 311 IENFAKQPVEVHIASEFLYNMPLLSKRPLFIFISQSGETADS 352

>CATA_ASCSU (P90682) Catalase (EC 1.11.1.6)|
          Length = 541

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 149 PFFFAGHLKTRARQQATYLSDPPSIW 226
           P FF   + T+ R   T+L DP  +W
Sbjct: 157 PIFFPNFIHTQKRNPVTHLKDPNMMW 182

>SYE1_HELHP (Q7VHN8) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Glutamate--tRNA|
           ligase 1) (GluRS 1)
          Length = 464

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -2

Query: 375 VYALTE*EPAAVCYKAKRELQ*ARGL*AKRRATVRDCSNRRDWEGIVP 232
           +  L E + A  CY +K EL   R    K + T R  +  RD+ GI P
Sbjct: 87  IQQLLESKKAYYCYMSKEELDALRKEQEKNKQTPRYDNRYRDFTGIPP 134

>HLDE_RHILO (Q98I54) Bifunctional protein hldE [Includes: D-beta-D-heptose|
           7-phosphate kinase (EC 2.7.1.-) (D-beta-D-heptose
           7-phosphotransferase); D-beta-D-heptose 1-phosphate
           adenosyltransferase (EC 2.7.7.-)]
          Length = 496

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +3

Query: 204 YLILLASGEE---ARSPPNHGG*NSLGPLPVASLTIHELTGVLF 326
           + + LASG +   A S  N  G   +G    A LT+ ELTG LF
Sbjct: 286 FALALASGADPVAAASIANAAGGVVVGKRGTARLTVEELTGALF 329

>CCNL1_MOUSE (Q52KE7) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)|
          Length = 532

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/42 (33%), Positives = 27/42 (64%)
 Frame = +2

Query: 245 SQSRRLEQSRTVARRFAHNPRAHWSSLFAL*QTAAGSYSVRA 370
           S+S    +SRT +R  +H+PR H+++     ++ +G+YS R+
Sbjct: 395 SRSASRSRSRTRSRSRSHSPRRHYNNR----RSRSGTYSSRS 432

>METL6_HUMAN (Q8TCB7) Methyltransferase-like protein 6 (EC 2.1.1.-)|
          Length = 255

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 11/60 (18%)
 Frame = -3

Query: 356 KNQQLFVTRQKENS-----------SELVDCERSDGQRSETVLTAVIGRGSCLFPRC*ED 210
           KN  LF  R   N             EL  C   + Q+  T+L A  G G+CLFP   ED
Sbjct: 43  KNWDLFYKRNSTNFFKDRHWTTREFEELRSCREFEDQKL-TMLEAGCGVGNCLFPLLEED 101


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,519,670
Number of Sequences: 219361
Number of extensions: 1130588
Number of successful extensions: 2470
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2470
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)