ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl05a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB028870.1| Hordeum vulgare Hv-MMT1 mRNA for S-adenosyl-L-me... 678 0.0
2gb|AF144079.1|AF144079 Zea mays S-adenosyl-L-methionine:L-methio... 90 5e-15
3gb|AY109558.1| Zea mays CL1511_1 mRNA sequence 74 3e-10
4ref|XM_475069.1| Oryza sativa (japonica cultivar-group), predic... 68 2e-08
5gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome... 68 2e-08
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 68 2e-08
7dbj|AK121285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
8gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome... 68 2e-08
9gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 42 1.1
10emb|AL954642.9| Human DNA sequence from clone RP11-885N19 on chr... 42 1.1
11emb|AL713922.12| Human DNA sequence from clone RP11-631M21 on ch... 42 1.1
12emb|AL591424.12| Human DNA sequence from clone RP11-424E7 on chr... 42 1.1
13emb|AJ271736.1|HSA271736 Homo sapiens Xq pseudoautosomal region;... 42 1.1
14gb|AE006462.1| Homo sapiens 16p13.3 sequence section 1 of 8 42 1.1
15gb|AC010552.6| Homo sapiens chromosome 16 clone RP11-568F1, comp... 42 1.1
16gb|AY071830.1| Homo sapiens interleukin 9 receptor (IL9R) gene, ... 42 1.1
17ref|NG_002764.1| Homo sapiens interleukin 9 receptor pseudogene ... 42 1.1
18emb|Z96384.1|HS18PT017 H.sapiens telomeric DNA sequence, clone 1... 42 1.1
19dbj|AP001005.6| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.1
20gb|L39064.1|HUMIL9RA Homo sapiens interleukin 9 receptor precurs... 42 1.1
21gb|L39063.1|HUMIL9RPS Homo sapiens interleukin 9 receptor (IL9R)... 42 1.1
22gb|L39062.1|HUMIL9R Homo sapiens interleukin 9 receptor IL9R pse... 42 1.1
23emb|Z84723.1|HSLAW2 Human DNA sequence from phage LAW2 from a co... 42 1.1
24gb|M84017.1|HUMSUBTDB Human subtelomeric DNA sequence 42 1.1
25gb|M84016.1|HUMSUBTDA Human subtelomeric DNA sequence 42 1.1
26ref|NM_120230.2| Arabidopsis thaliana protein binding / ubiquiti... 40 4.5
27ref|NM_202992.1| Arabidopsis thaliana protein binding / zinc ion... 40 4.5
28gb|AC159418.1| Trypanosoma brucei chromosome 5 clone RPCI93-25N2... 40 4.5
29gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 40 4.5
30gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosom... 40 4.5
31emb|Z70752.1|CEF25B3 Caenorhabditis elegans Cosmid F25B3, comple... 40 4.5
32gb|AC141864.7| Medicago truncatula clone mth2-21o24, complete se... 40 4.5
33emb|AL354807.6| Human DNA sequence from clone RP11-522F22 on chr... 40 4.5
34gb|AY091999.1| Macaca sp. phenylalanine hydroxylase gene, partia... 40 4.5
35gb|AY091998.1| Pongo pygmaeus phenylalanine hydroxylase gene, pa... 40 4.5
36gb|AY091997.1| Gorilla gorilla phenylalanine hydroxylase gene, p... 40 4.5
37gb|AY091165.1| Arabidopsis thaliana unknown protein (At5g01520) ... 40 4.5
38gb|AY056355.1| Arabidopsis thaliana unknown protein (At5g01520) ... 40 4.5
39gb|AY050835.1| Arabidopsis thaliana unknown protein (At5g01520) ... 40 4.5
40gb|AF370144.1| Arabidopsis thaliana unknown protein (At5g01520) ... 40 4.5
41emb|AL161946.1|ATF7A7 Arabidopsis thaliana DNA chromosome 5, BAC... 40 4.5
42gb|AC069227.24| Homo sapiens 12 BAC RP11-478G16 (Roswell Park Ca... 40 4.5
43dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 40 4.5
44dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 4.5
45gb|AF404777.1| Homo sapiens phenylalanine hydroxylase (PAH) gene... 40 4.5
46ref|NM_073072.3| Caenorhabditis elegans F25B3.6 (F25B3.6) mRNA, ... 40 4.5
47gb|DQ059129.1| Arabidopsis thaliana RING finger family protein (... 40 4.5
48gb|AC011238.8| Homo sapiens BAC clone RP11-374C5 from 2, complet... 40 4.5
49dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 4.5
50gb|AF204239.1|AF204239 Homo sapiens phenylalanine hydroxylase ge... 40 4.5
51emb|AL591807.1|CNS07EGQ Human chromosome 14 DNA sequence BAC R-1... 40 4.5
52gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 4.5
53gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, comple... 40 4.5
54gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, comple... 40 4.5 
>dbj|AB028870.1| Hordeum vulgare Hv-MMT1 mRNA for S-adenosyl-L-methionine:
            L-methionine S-methyltransferase, complete cds
          Length = 3543

 Score =  678 bits (342), Expect = 0.0
 Identities = 342/342 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    acaccaagagattcaacgcttttattccttttttgattcgaaacaaagttgttcaaacag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3482 acaccaagagattcaacgcttttattccttttttgattcgaaacaaagttgttcaaacag 3423

                                                                        
Query: 61   gcaaagaaagataagagttggttccccttcaggttttacagtttcttcacccacttgacc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3422 gcaaagaaagataagagttggttccccttcaggttttacagtttcttcacccacttgacc 3363

                                                                        
Query: 121  cacccaacaacccctagttgctaccattcaccttagcaccgccaccaaggaccagctccc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3362 cacccaacaacccctagttgctaccattcaccttagcaccgccaccaaggaccagctccc 3303

                                                                        
Query: 181  tgaaccgggcgatgcactccatggcccggtcgaagtcgccgctctccagagcaaagctga 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3302 tgaaccgggcgatgcactccatggcccggtcgaagtcgccgctctccagagcaaagctga 3243

                                                                        
Query: 241  agcggcagtagtccggcacccctgtccacccgctgctgctaatgcacagcccggtggacc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3242 agcggcagtagtccggcacccctgtccacccgctgctgctaatgcacagcccggtggacc 3183

                                                      
Query: 301  tcaggagggcttccctcatgttgtggctgtccagcttgccct 342
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3182 tcaggagggcttccctcatgttgtggctgtccagcttgccct 3141
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>gb|AF144079.1|AF144079 Zea mays S-adenosyl-L-methionine:L-methionine S-methyltransferase
            mRNA, complete cds
          Length = 3527

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 120/145 (82%)
 Strand = Plus / Minus

                                                                        
Query: 171  accagctccctgaaccgggcgatgcactccatggcccggtcgaagtcgccgctctccaga 230
            ||||||||| ||||||| || |||||  |||| || || ||||| || || |||||||||
Sbjct: 3248 accagctccttgaaccgagctatgcatcccatcgcacgctcgaattcccccctctccaga 3189

                                                                        
Query: 231  gcaaagctgaagcggcagtagtccggcacccctgtccacccgctgctgctaatgcacagc 290
            ||||||||||| ||||||||| | || | ||| |||||   ||||||| | |||||||||
Sbjct: 3188 gcaaagctgaaccggcagtagccagggatccccgtccaggagctgctgtttatgcacagc 3129

                                     
Query: 291  ccggtggacctcaggagggcttccc 315
            || |||| |||||||| ||||||||
Sbjct: 3128 ccagtggccctcaggatggcttccc 3104
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>gb|AY109558.1| Zea mays CL1511_1 mRNA sequence
          Length = 3458

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 223  tctccagagcaaagctgaagcggcagtagtccggcacccctgtccacccgctgctgctaa 282
            ||||||||||||||||||| ||||||||| | || | ||| |||||   ||||||| | |
Sbjct: 3196 tctccagagcaaagctgaaccggcagtagccagggatccccgtccaggagctgctgttta 3137

                                             
Query: 283  tgcacagcccggtggacctcaggagggcttccc 315
            |||||||||| |||| |||||||| ||||||||
Sbjct: 3136 tgcacagcccagtggccctcaggatggcttccc 3104
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>ref|XM_475069.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3255

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 94/114 (82%)
 Strand = Plus / Minus

                                                                        
Query: 210  tcgaagtcgccgctctccagagcaaagctgaagcggcagtagtccggcacccctgtccac 269
            ||||| |||| ||||||||||||||||||||| || ||||  ||||| |  |||||||| 
Sbjct: 3176 tcgaattcgctgctctccagagcaaagctgaaccgacagtgatccggtattcctgtccat 3117

                                                                  
Query: 270  ccgctgctgctaatgcacagcccggtggacctcaggagggcttccctcatgttg 323
              ||||||| | ||||||| |||||||||||| || | ||||||| | ||||||
Sbjct: 3116 gagctgctgtttatgcacaacccggtggacctgagaatggcttccttgatgttg 3063
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>gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0035J08, complete sequence
          Length = 117555

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 94/114 (82%)
 Strand = Plus / Plus

                                                                         
Query: 210   tcgaagtcgccgctctccagagcaaagctgaagcggcagtagtccggcacccctgtccac 269
             ||||| |||| ||||||||||||||||||||| || ||||  ||||| |  |||||||| 
Sbjct: 12448 tcgaattcgctgctctccagagcaaagctgaaccgacagtgatccggtattcctgtccat 12507

                                                                   
Query: 270   ccgctgctgctaatgcacagcccggtggacctcaggagggcttccctcatgttg 323
               ||||||| | ||||||| |||||||||||| || | ||||||| | ||||||
Sbjct: 12508 gagctgctgtttatgcacaacccggtggacctgagaatggcttccttgatgttg 12561
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 94/114 (82%)
 Strand = Plus / Plus

                                                                          
Query: 210    tcgaagtcgccgctctccagagcaaagctgaagcggcagtagtccggcacccctgtccac 269
              ||||| |||| ||||||||||||||||||||| || ||||  ||||| |  |||||||| 
Sbjct: 236928 tcgaattcgctgctctccagagcaaagctgaaccgacagtgatccggtattcctgtccat 236987

                                                                    
Query: 270    ccgctgctgctaatgcacagcccggtggacctcaggagggcttccctcatgttg 323
                ||||||| | ||||||| |||||||||||| || | ||||||| | ||||||
Sbjct: 236988 gagctgctgtttatgcacaacccggtggacctgagaatggcttccttgatgttg 237041
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>dbj|AK121285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108O11, full
            insert sequence
          Length = 3542

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 94/114 (82%)
 Strand = Plus / Minus

                                                                        
Query: 210  tcgaagtcgccgctctccagagcaaagctgaagcggcagtagtccggcacccctgtccac 269
            ||||| |||| ||||||||||||||||||||| || ||||  ||||| |  |||||||| 
Sbjct: 3254 tcgaattcgctgctctccagagcaaagctgaaccgacagtgatccggtattcctgtccat 3195

                                                                  
Query: 270  ccgctgctgctaatgcacagcccggtggacctcaggagggcttccctcatgttg 323
              ||||||| | ||||||| |||||||||||| || | ||||||| | ||||||
Sbjct: 3194 gagctgctgtttatgcacaacccggtggacctgagaatggcttccttgatgttg 3141
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>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12,
              complete sequence
          Length = 160603

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 94/114 (82%)
 Strand = Plus / Plus

                                                                          
Query: 210    tcgaagtcgccgctctccagagcaaagctgaagcggcagtagtccggcacccctgtccac 269
              ||||| |||| ||||||||||||||||||||| || ||||  ||||| |  |||||||| 
Sbjct: 119112 tcgaattcgctgctctccagagcaaagctgaaccgacagtgatccggtattcctgtccat 119171

                                                                    
Query: 270    ccgctgctgctaatgcacagcccggtggacctcaggagggcttccctcatgttg 323
                ||||||| | ||||||| |||||||||||| || | ||||||| | ||||||
Sbjct: 119172 gagctgctgtttatgcacaacccggtggacctgagaatggcttccttgatgttg 119225
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>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 87     cttcaggttttacagtttctt 107
              |||||||||||||||||||||
Sbjct: 897732 cttcaggttttacagtttctt 897712
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>emb|AL954642.9| Human DNA sequence from clone RP11-885N19 on chromosome 9 Contains the
             3' end of the CACNA1B gene for alpha 1B subunit of L type
             voltage-dependent calcium channel, a pseudogene similar to
             part of interleukin 9 receptor (ILR9), a tubulin, beta
             polypeptide 4, member Q (TUBB4Q) pseudogene and five CpG
             islands, complete sequence
          Length = 154372

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 294   gtggacctcaggagggcttcc 314
             |||||||||||||||||||||
Sbjct: 38778 gtggacctcaggagggcttcc 38798
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>emb|AL713922.12| Human DNA sequence from clone RP11-631M21 on chromosome 10 Contains a
             novel gene, the gene for a novel protein similar to
             beta-tubulin 4Q (TUBB4Q) (LOC253936), the interleukin 9
             receptor (IL9R) pseudogene (IL9RP2), the 5' end of the
             gene for adenovirus 5 E1A binding protein (BS69), a novel
             pseudogene (FLJ40100) and four CpG islands, complete
             sequence
          Length = 164405

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 294   gtggacctcaggagggcttcc 314
             |||||||||||||||||||||
Sbjct: 67022 gtggacctcaggagggcttcc 67002
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>emb|AL591424.12| Human DNA sequence from clone RP11-424E7 on chromosome 9 Contains the
             3' end of the CACNA1B gene for alpha 1B subunit of L type
             voltage-dependent calcium channel, a pseudogene similar to
             part of interleukin 9 receptor (ILR9), a tubulin, beta
             polypeptide 4, member Q (TUBB4Q) pseudogene and five CpG
             islands, complete sequence
          Length = 201853

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 294   gtggacctcaggagggcttcc 314
             |||||||||||||||||||||
Sbjct: 49535 gtggacctcaggagggcttcc 49515
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>emb|AJ271736.1|HSA271736 Homo sapiens Xq pseudoautosomal region; segment 2/2
          Length = 158661

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 294    gtggacctcaggagggcttcc 314
              |||||||||||||||||||||
Sbjct: 137456 gtggacctcaggagggcttcc 137476
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>gb|AE006462.1| Homo sapiens 16p13.3 sequence section 1 of 8
          Length = 258002

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 294   gtggacctcaggagggcttcc 314
             |||||||||||||||||||||
Sbjct: 20058 gtggacctcaggagggcttcc 20038
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>gb|AC010552.6| Homo sapiens chromosome 16 clone RP11-568F1, complete sequence
          Length = 202889

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 294   gtggacctcaggagggcttcc 314
             |||||||||||||||||||||
Sbjct: 89266 gtggacctcaggagggcttcc 89246
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>gb|AY071830.1| Homo sapiens interleukin 9 receptor (IL9R) gene, complete cds
          Length = 15446

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 294   gtggacctcaggagggcttcc 314
             |||||||||||||||||||||
Sbjct: 13557 gtggacctcaggagggcttcc 13577
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>ref|NG_002764.1| Homo sapiens interleukin 9 receptor pseudogene 4 (IL9RP4) on
           chromosome 18
          Length = 7317

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 294 gtggacctcaggagggcttcc 314
           |||||||||||||||||||||
Sbjct: 751 gtggacctcaggagggcttcc 731
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>emb|Z96384.1|HS18PT017 H.sapiens telomeric DNA sequence, clone 18PTEL017, read
           18PTELOO017.seq
          Length = 1164

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 294 gtggacctcaggagggcttcc 314
           |||||||||||||||||||||
Sbjct: 156 gtggacctcaggagggcttcc 136
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>dbj|AP001005.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-683L23, complete
             sequence
          Length = 137001

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 294   gtggacctcaggagggcttcc 314
             |||||||||||||||||||||
Sbjct: 64619 gtggacctcaggagggcttcc 64599
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>gb|L39064.1|HUMIL9RA Homo sapiens interleukin 9 receptor precursor (IL9R) gene, complete cds
          Length = 17073

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 294   gtggacctcaggagggcttcc 314
             |||||||||||||||||||||
Sbjct: 13707 gtggacctcaggagggcttcc 13727
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>gb|L39063.1|HUMIL9RPS Homo sapiens interleukin 9 receptor (IL9R) pseudogene, exons 1-9
          Length = 10550

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 294  gtggacctcaggagggcttcc 314
            |||||||||||||||||||||
Sbjct: 8436 gtggacctcaggagggcttcc 8456
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>gb|L39062.1|HUMIL9R Homo sapiens interleukin 9 receptor IL9R pseudogene, exons 1-9
          Length = 13649

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 294  gtggacctcaggagggcttcc 314
            |||||||||||||||||||||
Sbjct: 9612 gtggacctcaggagggcttcc 9632
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>emb|Z84723.1|HSLAW2 Human DNA sequence from phage LAW2 from a contig from the tip of the
            short arm of chromosome 16, spanning 2Mb of 16p13.3
            Contains Interleukin 9 receptor pseudogene
          Length = 17000

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 294  gtggacctcaggagggcttcc 314
            |||||||||||||||||||||
Sbjct: 9420 gtggacctcaggagggcttcc 9400
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>gb|M84017.1|HUMSUBTDB Human subtelomeric DNA sequence
          Length = 750

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 294 gtggacctcaggagggcttcc 314
           |||||||||||||||||||||
Sbjct: 607 gtggacctcaggagggcttcc 587
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>gb|M84016.1|HUMSUBTDA Human subtelomeric DNA sequence
          Length = 2930

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 294 gtggacctcaggagggcttcc 314
           |||||||||||||||||||||
Sbjct: 651 gtggacctcaggagggcttcc 631
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>ref|NM_120230.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT5G01520 transcript variant
           AT5G01520.1 mRNA, complete cds
          Length = 1306

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837
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>ref|NM_202992.1| Arabidopsis thaliana protein binding / zinc ion binding AT5G01520
           transcript variant AT5G01520.2 mRNA, complete cds
          Length = 1325

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837
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>gb|AC159418.1| Trypanosoma brucei chromosome 5 clone RPCI93-25N21, complete sequence
          Length = 80752

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 11    attcaacgcttttattcctttttt 34
             |||||||| |||||||||||||||
Sbjct: 42201 attcaacgtttttattcctttttt 42224
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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    attcaacgcttttattcctttttt 34
             |||||||| |||||||||||||||
Sbjct: 38552 attcaacgtttttattcctttttt 38529
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>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence
          Length = 197482

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    cttttattccttttttgatt 38
             ||||||||||||||||||||
Sbjct: 66041 cttttattccttttttgatt 66022
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>emb|Z70752.1|CEF25B3 Caenorhabditis elegans Cosmid F25B3, complete sequence
          Length = 30182

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    ttttattccttttttgattc 39
             ||||||||||||||||||||
Sbjct: 29284 ttttattccttttttgattc 29265
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>gb|AC141864.7| Medicago truncatula clone mth2-21o24, complete sequence
          Length = 106571

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 86     ccttcaggttttacagtttcttca 109
              ||||||||||| ||||||||||||
Sbjct: 100223 ccttcaggtttcacagtttcttca 100246
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>emb|AL354807.6| Human DNA sequence from clone RP11-522F22 on chromosome 13 Contains a
             DnaJ (Hsp40) homolog, subfamily A, member 1 (DNAJA1)
             pseudogene, complete sequence
          Length = 157135

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    aaagttgttcaaacaggcaa 64
             ||||||||||||||||||||
Sbjct: 24310 aaagttgttcaaacaggcaa 24329
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>gb|AY091999.1| Macaca sp. phenylalanine hydroxylase gene, partial cds
          Length = 1149

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  aggcaaagaaagataagagt 78
           ||||||||||||||||||||
Sbjct: 427 aggcaaagaaagataagagt 408
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>gb|AY091998.1| Pongo pygmaeus phenylalanine hydroxylase gene, partial cds
          Length = 1148

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  aggcaaagaaagataagagt 78
           ||||||||||||||||||||
Sbjct: 427 aggcaaagaaagataagagt 408
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>gb|AY091997.1| Gorilla gorilla phenylalanine hydroxylase gene, partial cds
          Length = 1148

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  aggcaaagaaagataagagt 78
           ||||||||||||||||||||
Sbjct: 427 aggcaaagaaagataagagt 408
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>gb|AY091165.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 760

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 453 gattcgaaacaaagttgttc 472
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>gb|AY056355.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 550

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 453 gattcgaaacaaagttgttc 472
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>gb|AY050835.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 1285

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837
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>gb|AF370144.1| Arabidopsis thaliana unknown protein (At5g01520) mRNA, complete cds
          Length = 1327

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 818 gattcgaaacaaagttgttc 837
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>emb|AL161946.1|ATF7A7 Arabidopsis thaliana DNA chromosome 5, BAC clone F7A7 (ESSA project)
          Length = 86690

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    gattcgaaacaaagttgttc 54
             ||||||||||||||||||||
Sbjct: 15695 gattcgaaacaaagttgttc 15714
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>gb|AC069227.24| Homo sapiens 12 BAC RP11-478G16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 167398

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    aggcaaagaaagataagagt 78
             ||||||||||||||||||||
Sbjct: 88691 aggcaaagaaagataagagt 88672
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>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 65      agaaagataagagttggttc 84
               ||||||||||||||||||||
Sbjct: 2524950 agaaagataagagttggttc 2524969
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 322     tgtggctgtccagcttgccc 341
               ||||||||||||||||||||
Sbjct: 3335647 tgtggctgtccagcttgccc 3335666
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>gb|AF404777.1| Homo sapiens phenylalanine hydroxylase (PAH) gene, complete cds
          Length = 171266

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    aggcaaagaaagataagagt 78
             ||||||||||||||||||||
Sbjct: 92558 aggcaaagaaagataagagt 92539
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>ref|NM_073072.3| Caenorhabditis elegans F25B3.6 (F25B3.6) mRNA, complete cds
          Length = 2356

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   ttttattccttttttgattc 39
            ||||||||||||||||||||
Sbjct: 2225 ttttattccttttttgattc 2244
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>gb|DQ059129.1| Arabidopsis thaliana RING finger family protein (At5g01520) mRNA,
           complete cds
          Length = 729

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  gattcgaaacaaagttgttc 54
           ||||||||||||||||||||
Sbjct: 453 gattcgaaacaaagttgttc 472
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>gb|AC011238.8| Homo sapiens BAC clone RP11-374C5 from 2, complete sequence
          Length = 155764

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 255   ggcacccctgtccacccgctgctg 278
             |||||||||| |||||||||||||
Sbjct: 69891 ggcacccctgcccacccgctgctg 69914
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 259     cccctgtccacccgctgctg 278
               ||||||||||||||||||||
Sbjct: 2383240 cccctgtccacccgctgctg 2383259
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>gb|AF204239.1|AF204239 Homo sapiens phenylalanine hydroxylase gene, intron 7, complete
           sequence
          Length = 1058

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  aggcaaagaaagataagagt 78
           ||||||||||||||||||||
Sbjct: 373 aggcaaagaaagataagagt 354
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>emb|AL591807.1|CNS07EGQ Human chromosome 14 DNA sequence BAC R-1047D15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 183418

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    ataagagttggttccccttc 90
             ||||||||||||||||||||
Sbjct: 28958 ataagagttggttccccttc 28939
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 72      taagagttggttccccttca 91
               ||||||||||||||||||||
Sbjct: 1761075 taagagttggttccccttca 1761056
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>gb|AC133935.3| Mus musculus BAC clone RP24-387M21 from 3, complete sequence
          Length = 182101

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 54     caaacaggcaaagaaagataagag 77
              |||||||||||| |||||||||||
Sbjct: 160718 caaacaggcaaacaaagataagag 160741
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>gb|AC132225.3| Mus musculus BAC clone RP24-558H21 from 3, complete sequence
          Length = 189301

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 54    caaacaggcaaagaaagataagag 77
             |||||||||||| |||||||||||
Sbjct: 28917 caaacaggcaaacaaagataagag 28940


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,039,922
Number of Sequences: 3902068
Number of extensions: 3039922
Number of successful extensions: 65587
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65398
Number of HSP's gapped (non-prelim): 187
length of query: 342
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 320
effective length of database: 17,147,199,772
effective search space: 5487103927040
effective search space used: 5487103927040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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