>RHAAB_BACSK (Q5WL39) RhaA/rhaB bifunctional enzyme [Includes: Rhamnulokinase|
           (EC 2.7.1.5) (Rhamnulose kinase); L-rhamnose isomerase
           (EC 5.3.1.14)]
          Length = 894

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 21/53 (39%), Positives = 24/53 (45%)
 Frame = -3

Query: 357 RRAVRLAKAVTYIWPHSRELHQSSRGIGVAIKRS*CGTSVGAAFHRVN*HPES 199
           R  VR A  VTY  P   E H SSR     ++    G  V AAF +V   P S
Sbjct: 451 RALVRTAFPVTYFLPQRSESHVSSRFESAKVQYEQLGIDVEAAFAKVKQVPIS 503

>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein|
           (Dystrophia myotonica-containing WD repeat motif
           protein) (DMR-N9 protein)
          Length = 650

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 422 FSPSGRHVLCIGKDGSL 372
           FSP GRH+ C+ +DG L
Sbjct: 274 FSPDGRHLACVSQDGCL 290

>CHD2_HUMAN (O14647) Chromodomain-helicase-DNA-binding protein 2 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD2) (CHD-2)
          Length = 1739

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = +3

Query: 27   HRSRDARKKEEIRAPQHSQFTNDNSYKNHMTSQQIQQRGC*QPDTKMC 170
            HRS   R     R   + Q+++D  ++ H        +GC  P   +C
Sbjct: 1684 HRSGSYRPNNMSRKRPYDQYSSDRDHRGHRDYYDRYAKGCETPGANLC 1731


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,760,640
Number of Sequences: 219361
Number of extensions: 1305686
Number of successful extensions: 2504
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2504
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)