ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl05a03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK070310.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 8e-61
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
3dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
4dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
5ref|NM_101539.1| Arabidopsis thaliana AVPL1 (VACUOLAR-PYROPHOSPH... 86 1e-13
6emb|BX817279.1|CNS0AB7C Arabidopsis thaliana Full-length cDNA Co... 82 2e-12
7ref|NM_106541.2| Arabidopsis thaliana AVP2 AT1G78920 (AVP2) mRNA... 74 4e-10
8gb|BT010353.1| Arabidopsis thaliana At1g78920 mRNA, complete cds 74 4e-10
9dbj|AK220927.1| Arabidopsis thaliana mRNA for vacuolar-pyrophosp... 74 4e-10
10gb|AY054485.1| Arabidopsis thaliana Similar to vacuolar H+-pyrop... 74 4e-10
11emb|BX815888.1|CNS0ABNT Arabidopsis thaliana Full-length cDNA Co... 74 4e-10
12emb|BX816636.1|CNS0AAKC Arabidopsis thaliana Full-length cDNA Co... 74 4e-10
13gb|AF182813.1|AF182813 Arabidopsis thaliana vacuolar-type H+-tra... 74 4e-10
14dbj|AB034696.1| Arabidopsis thaliana AVPL1 mRNA for vacuolar-pyr... 74 4e-10
15gb|AF184917.1|AF184917 Arabidopsis thaliana vacuolar-type H+-tra... 60 7e-06
16gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 ... 60 7e-06
17dbj|D86306.1| Cucurbita moschata mRNA for proton-translocating i... 54 4e-04
18gb|AE011990.1| Xanthomonas axonopodis pv. citri str. 306, secti... 52 0.002
19gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17... 52 0.002
20emb|X83729.1|NTIPTVP31 N.tabacum mRNA for inorganic pyrophosphat... 48 0.025
21gb|AF367446.1| Prunus persica clone Vp1 vacuolar H+-pyrophosphat... 46 0.098
22gb|L32791.1|BEUPYRO Beta vulgaris clone P2 pyrophosphatase mRNA,... 46 0.098
23emb|X83728.1|NTIPTVP17 N.tabacum mRNA for inorganic pyrophosphat... 46 0.098
24gb|AY103622.1| Zea mays PCO084888 mRNA sequence 46 0.098
25gb|U31467.1|VRU31467 Vigna radiata pyrophosphatase mRNA, complet... 46 0.098
26dbj|AB009077.1| Vigna radiata mRNA for proton pyrophosphatase, c... 46 0.098
27gb|AC151744.23| Medicago truncatula clone mth2-32k10, complete s... 44 0.39
28gb|L32792.1|BEUPYROA Beta vulgaris clone P1 pyrophosphatase mRNA... 44 0.39
29dbj|AP006375.1| Lotus japonicus genomic DNA, chromosome 4, clone... 44 0.39
30dbj|D88820.1| Acetabularia mediterranea mRNA for inorganic pyrop... 44 0.39
31emb|AL355986.7| Human DNA sequence from clone RP11-516G5 on chro... 42 1.5
32dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.5
33gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.5
34emb|BX571676.5| Zebrafish DNA sequence from clone DKEY-242N5 in ... 42 1.5
35gb|AC157991.5| Mus musculus chromosome 18, clone RP23-335B10, co... 40 6.1
36gb|AC102155.10| Mus musculus chromosome 18, clone RP23-334J12, c... 40 6.1
37gb|AC116130.15| Mus musculus chromosome 17, clone RP23-98F21, co... 40 6.1
38gb|AC153972.6| Mus musculus 10 BAC RP24-383P4 (Roswell Park Canc... 40 6.1
39gb|AC132608.2| Mus musculus BAC clone RP23-451E12 from chromosom... 40 6.1
40emb|AL118511.25|HSDJ858B6 Human DNA sequence from clone RP5-858B... 40 6.1
41emb|AL031687.17|HS998H6 Human DNA sequence from clone RP5-998H6 ... 40 6.1
42dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138 40 6.1
43gb|AC016657.5| Homo sapiens chromosome 5 clone RP1-6C3, complete... 40 6.1
44gb|AC159504.5| Mus musculus 10 BAC RP23-302J6 (Roswell Park Canc... 40 6.1
45gb|AF532114.1| Mus musculus strain 129/SvJ BAC clone citb544e14 ... 40 6.1
46gb|AC069275.3|AC069275 Homo sapiens chromosome 3 clone RP11-194C... 40 6.1
47gb|AC023472.4|AC023472 Homo sapiens chromosome 3 clone RP11-156B... 40 6.1
48emb|AJ278019.1|LES278019 Lycopersicon esculentum partial mRNA fo... 40 6.1
49gb|AC104098.5| Mus musculus BAC clone RP24-372H3 from 5, complet... 40 6.1
50gb|AC069276.4| Homo sapiens chromosome 3 clone RP11-470E10 map 3... 40 6.1
51gb|AC018832.5| Homo sapiens chromosome 3 clone RP11-481O7 map 3p... 40 6.1 
>dbj|AK070310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F16, full
            insert sequence
          Length = 3048

 Score =  242 bits (122), Expect = 8e-61
 Identities = 180/198 (90%), Gaps = 1/198 (0%)
 Strand = Plus / Minus

                                                                        
Query: 254  ggagccatgaccagtgtgatcgtggcgagcatcttgatgagaacatggatcgaaggcccc 313
            |||||||| || | |||||| || ||||||||||| || ||||||||||| |||||||||
Sbjct: 2881 ggagccatcactaatgtgattgtagcgagcatcttaataagaacatggatggaaggcccc 2822

                                                                        
Query: 314  gccgtgtctttgaatggatctccaaccgtatcaccagtaattgcagccttgtgagcctca 373
            ||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 2821 gccgtgtctttaaatggatctccaaccgtatcaccagtaactgcagccttgtgagactca 2762

                                                                        
Query: 374  ctgcctttaccaccaagtgcaccagtctcgatgtacttcttagcattatcccaagc-cca 432
            |||||||| |||||||| || |||||||||||||||||||||||||||||||| || |||
Sbjct: 2761 ctgcctttgccaccaagagcgccagtctcgatgtacttcttagcattatcccaggcacca 2702

                              
Query: 433  ccagaggtgttcaagaag 450
            ||||  ||||||||||||
Sbjct: 2701 ccagcagtgttcaagaag 2684
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  143 bits (72), Expect = 6e-31
 Identities = 103/112 (91%), Gaps = 1/112 (0%)
 Strand = Plus / Plus

                                                                            
Query: 340      cgtatcaccagtaattgcagccttgtgagcctcactgcctttaccaccaagtgcaccagt 399
                |||||||||||||| |||||||||||||| |||||||||||| |||||||| || |||||
Sbjct: 19932561 cgtatcaccagtaactgcagccttgtgagactcactgcctttgccaccaagagcgccagt 19932620

                                                                    
Query: 400      ctcgatgtacttcttagcattatcccaagc-ccaccagaggtgttcaagaag 450
                ||||||||||||||||||||||||||| || |||||||  ||||||||||||
Sbjct: 19932621 ctcgatgtacttcttagcattatcccaggcaccaccagcagtgttcaagaag 19932672



 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Plus

                                                                            
Query: 254      ggagccatgaccagtgtgatcgtggcgagcatcttgatgagaacatggatcgaaggcccc 313
                |||||||| || | |||||| || ||||||||||| || ||||||||||| |||||||||
Sbjct: 19932104 ggagccatcactaatgtgattgtagcgagcatcttaataagaacatggatggaaggcccc 19932163

                                           
Query: 314      gccgtgtctttgaatggatctccaacc 340
                ||||||||||| |||||||||||||||
Sbjct: 19932164 gccgtgtctttaaatggatctccaacc 19932190
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>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0508B05
          Length = 166165

 Score =  143 bits (72), Expect = 6e-31
 Identities = 103/112 (91%), Gaps = 1/112 (0%)
 Strand = Plus / Plus

                                                                          
Query: 340    cgtatcaccagtaattgcagccttgtgagcctcactgcctttaccaccaagtgcaccagt 399
              |||||||||||||| |||||||||||||| |||||||||||| |||||||| || |||||
Sbjct: 110162 cgtatcaccagtaactgcagccttgtgagactcactgcctttgccaccaagagcgccagt 110221

                                                                  
Query: 400    ctcgatgtacttcttagcattatcccaagc-ccaccagaggtgttcaagaag 450
              ||||||||||||||||||||||||||| || |||||||  ||||||||||||
Sbjct: 110222 ctcgatgtacttcttagcattatcccaggcaccaccagcagtgttcaagaag 110273



 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Plus

                                                                          
Query: 254    ggagccatgaccagtgtgatcgtggcgagcatcttgatgagaacatggatcgaaggcccc 313
              |||||||| || | |||||| || ||||||||||| || ||||||||||| |||||||||
Sbjct: 109705 ggagccatcactaatgtgattgtagcgagcatcttaataagaacatggatggaaggcccc 109764

                                         
Query: 314    gccgtgtctttgaatggatctccaacc 340
              ||||||||||| |||||||||||||||
Sbjct: 109765 gccgtgtctttaaatggatctccaacc 109791
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>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0014M17
          Length = 156778

 Score =  143 bits (72), Expect = 6e-31
 Identities = 103/112 (91%), Gaps = 1/112 (0%)
 Strand = Plus / Plus

                                                                         
Query: 340   cgtatcaccagtaattgcagccttgtgagcctcactgcctttaccaccaagtgcaccagt 399
             |||||||||||||| |||||||||||||| |||||||||||| |||||||| || |||||
Sbjct: 36682 cgtatcaccagtaactgcagccttgtgagactcactgcctttgccaccaagagcgccagt 36741

                                                                 
Query: 400   ctcgatgtacttcttagcattatcccaagc-ccaccagaggtgttcaagaag 450
             ||||||||||||||||||||||||||| || |||||||  ||||||||||||
Sbjct: 36742 ctcgatgtacttcttagcattatcccaggcaccaccagcagtgttcaagaag 36793



 Score =  101 bits (51), Expect = 2e-18
 Identities = 78/87 (89%)
 Strand = Plus / Plus

                                                                         
Query: 254   ggagccatgaccagtgtgatcgtggcgagcatcttgatgagaacatggatcgaaggcccc 313
             |||||||| || | |||||| || ||||||||||| || ||||||||||| |||||||||
Sbjct: 36225 ggagccatcactaatgtgattgtagcgagcatcttaataagaacatggatggaaggcccc 36284

                                        
Query: 314   gccgtgtctttgaatggatctccaacc 340
             ||||||||||| |||||||||||||||
Sbjct: 36285 gccgtgtctttaaatggatctccaacc 36311
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>ref|NM_101539.1| Arabidopsis thaliana AVPL1 (VACUOLAR-PYROPHOSPHATASE LIKE PROTEIN 1)
            AT1G16780 (AVPL1) mRNA, complete cds
          Length = 2578

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 148/183 (80%)
 Strand = Plus / Minus

                                                                        
Query: 247  aaagatcggagccatgaccagtgtgatcgtggcgagcatcttgatgagaacatggatcga 306
            |||||| ||||||||||| || ||||| || || | ||| ||||||||||| || |||||
Sbjct: 2403 aaagataggagccatgacaagcgtgatagtcgccaacattttgatgagaacgtgaatcga 2344

                                                                        
Query: 307  aggccccgccgtgtctttgaatggatctccaaccgtatcaccagtaattgcagccttgtg 366
             || || || ||||| ||||| || ||||| || ||||||||||| | |||||| |||||
Sbjct: 2343 cggtcctgctgtgtccttgaaagggtctcccacagtatcaccagttactgcagctttgtg 2284

                                                                        
Query: 367  agcctcactgcctttaccaccaagtgcaccagtctcgatgtacttcttagcattatccca 426
             |  ||||| ||||| || || || || |||||||| ||||| ||||| ||||| |||||
Sbjct: 2283 ggaatcacttcctttgcctcctagagctccagtctcaatgtatttctttgcattgtccca 2224

               
Query: 427  agc 429
            |||
Sbjct: 2223 agc 2221
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>emb|BX817279.1|CNS0AB7C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL10ZC09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 508

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 95/113 (84%)
 Strand = Plus / Minus

                                                                       
Query: 317 gtgtctttgaatggatctccaaccgtatcaccagtaattgcagccttgtgagcctcactg 376
           ||||| ||||| |||||||| || |||||||||||||  || || |||||||| ||||| 
Sbjct: 237 gtgtccttgaacggatctcccacggtatcaccagtaacagctgctttgtgagcttcactt 178

                                                                
Query: 377 cctttaccaccaagtgcaccagtctcgatgtacttcttagcattatcccaagc 429
           ||||| || |||||||| || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 177 cctttgcccccaagtgccccggtctctatgtatttctttgcattgtcccaagc 125
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>ref|NM_106541.2| Arabidopsis thaliana AVP2 AT1G78920 (AVP2) mRNA, complete cds
          Length = 3082

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 317  gtgtctttgaatggatctccaaccgtatcaccagtaattgcagccttgtgagcctcactg 376
            ||||| ||||| |||||||| || ||||||||||| |  || || |||||||| ||||| 
Sbjct: 2786 gtgtccttgaacggatctcccacggtatcaccagtcacagctgctttgtgagcttcactt 2727

                                                                 
Query: 377  cctttaccaccaagtgcaccagtctcgatgtacttcttagcattatcccaagc 429
            ||||| || |||||||| || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 2726 cctttgcccccaagtgccccggtctctatgtatttctttgcattgtcccaagc 2674
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>gb|BT010353.1| Arabidopsis thaliana At1g78920 mRNA, complete cds
          Length = 2409

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 317  gtgtctttgaatggatctccaaccgtatcaccagtaattgcagccttgtgagcctcactg 376
            ||||| ||||| |||||||| || ||||||||||| |  || || |||||||| ||||| 
Sbjct: 2333 gtgtccttgaacggatctcccacggtatcaccagtcacagctgctttgtgagcttcactt 2274

                                                                 
Query: 377  cctttaccaccaagtgcaccagtctcgatgtacttcttagcattatcccaagc 429
            ||||| || |||||||| || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 2273 cctttgcccccaagtgccccggtctctatgtatttctttgcattgtcccaagc 2221
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>dbj|AK220927.1| Arabidopsis thaliana mRNA for vacuolar-pyrophosphatase like
           protein, complete cds, clone: RAFL22-50-C13
          Length = 1137

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                       
Query: 317 gtgtctttgaatggatctccaaccgtatcaccagtaattgcagccttgtgagcctcactg 376
           ||||| ||||| |||||||| || ||||||||||| |  || || |||||||| ||||| 
Sbjct: 832 gtgtccttgaacggatctcccacggtatcaccagtcacagctgctttgtgagcttcactt 773

                                                                
Query: 377 cctttaccaccaagtgcaccagtctcgatgtacttcttagcattatcccaagc 429
           ||||| || |||||||| || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 772 cctttgcccccaagtgccccggtctctatgtatttctttgcattgtcccaagc 720
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>gb|AY054485.1| Arabidopsis thaliana Similar to vacuolar H+-pyrophosphatase
            (At1g78920; F9K20.2) mRNA, complete cds
          Length = 3080

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 317  gtgtctttgaatggatctccaaccgtatcaccagtaattgcagccttgtgagcctcactg 376
            ||||| ||||| |||||||| || ||||||||||| |  || || |||||||| ||||| 
Sbjct: 2784 gtgtccttgaacggatctcccacggtatcaccagtcacagctgctttgtgagcttcactt 2725

                                                                 
Query: 377  cctttaccaccaagtgcaccagtctcgatgtacttcttagcattatcccaagc 429
            ||||| || |||||||| || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 2724 cctttgcccccaagtgccccggtctctatgtatttctttgcattgtcccaagc 2672
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>emb|BX815888.1|CNS0ABNT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH15ZB05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 567

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                       
Query: 317 gtgtctttgaatggatctccaaccgtatcaccagtaattgcagccttgtgagcctcactg 376
           ||||| ||||| |||||||| || ||||||||||| |  || || |||||||| ||||| 
Sbjct: 282 gtgtccttgaacggatctcccacggtatcaccagtcacagctgctttgtgagcttcactt 223

                                                                
Query: 377 cctttaccaccaagtgcaccagtctcgatgtacttcttagcattatcccaagc 429
           ||||| || |||||||| || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 222 cctttgcccccaagtgccccggtctctatgtatttctttgcattgtcccaagc 170
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>emb|BX816636.1|CNS0AAKC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH5ZE09 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 3011

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 317  gtgtctttgaatggatctccaaccgtatcaccagtaattgcagccttgtgagcctcactg 376
            ||||| ||||| |||||||| || ||||||||||| |  || || |||||||| ||||| 
Sbjct: 2759 gtgtccttgaacggatctcccacggtatcaccagtcacagctgctttgtgagcttcactt 2700

                                                                 
Query: 377  cctttaccaccaagtgcaccagtctcgatgtacttcttagcattatcccaagc 429
            ||||| || |||||||| || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 2699 cctttgcccccaagtgccccggtctctatgtatttctttgcattgtcccaagc 2647
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>gb|AF182813.1|AF182813 Arabidopsis thaliana vacuolar-type H+-translocating inorganic
            pyrophosphatase (AVP2) mRNA, complete cds
          Length = 2403

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 317  gtgtctttgaatggatctccaaccgtatcaccagtaattgcagccttgtgagcctcactg 376
            ||||| ||||| |||||||| || ||||||||||| |  || || |||||||| ||||| 
Sbjct: 2327 gtgtccttgaacggatctcccacggtatcaccagtcacagctgctttgtgagcttcactt 2268

                                                                 
Query: 377  cctttaccaccaagtgcaccagtctcgatgtacttcttagcattatcccaagc 429
            ||||| || |||||||| || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 2267 cctttgcccccaagtgccccggtctctatgtatttctttgcattgtcccaagc 2215
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>dbj|AB034696.1| Arabidopsis thaliana AVPL1 mRNA for vacuolar-pyrophosphatase like
            protein, complete cds
          Length = 2991

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 317  gtgtctttgaatggatctccaaccgtatcaccagtaattgcagccttgtgagcctcactg 376
            ||||| ||||| |||||||| || ||||||||||| |  || || |||||||| ||||| 
Sbjct: 2704 gtgtccttgaacggatctcccacggtatcaccagtcacagctgctttgtgagcttcactt 2645

                                                                 
Query: 377  cctttaccaccaagtgcaccagtctcgatgtacttcttagcattatcccaagc 429
            ||||| || |||||||| || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 2644 cctttgcccccaagtgccccggtctctatgtatttctttgcattgtcccaagc 2592
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>gb|AF184917.1|AF184917 Arabidopsis thaliana vacuolar-type H+-translocating inorganic
            pyrophosphatase (AVP2) gene, complete cds
          Length = 7500

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 75/90 (83%)
 Strand = Plus / Plus

                                                                        
Query: 340  cgtatcaccagtaattgcagccttgtgagcctcactgcctttaccaccaagtgcaccagt 399
            |||||||||||| |  || || |||||||| ||||| ||||| || |||||||| || ||
Sbjct: 1313 cgtatcaccagtcacagctgctttgtgagcttcacttcctttgcccccaagtgccccggt 1372

                                          
Query: 400  ctcgatgtacttcttagcattatcccaagc 429
            ||| ||||| ||||| ||||| ||||||||
Sbjct: 1373 ctctatgtatttctttgcattgtcccaagc 1402
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>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete
            sequence
          Length = 90425

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 75/90 (83%)
 Strand = Plus / Plus

                                                                        
Query: 340  cgtatcaccagtaattgcagccttgtgagcctcactgcctttaccaccaagtgcaccagt 399
            |||||||||||| |  || || |||||||| ||||| ||||| || |||||||| || ||
Sbjct: 1313 cgtatcaccagtcacagctgctttgtgagcttcacttcctttgcccccaagtgccccggt 1372

                                          
Query: 400  ctcgatgtacttcttagcattatcccaagc 429
            ||| ||||| ||||| ||||| ||||||||
Sbjct: 1373 ctctatgtatttctttgcattgtcccaagc 1402
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>dbj|D86306.1| Cucurbita moschata mRNA for proton-translocating inorganic
            pyrophosphatase, complete cds
          Length = 2704

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 392  gcaccagtctcgatgtacttcttagcattatccca 426
            ||||||| |||||||||||||||||| ||||||||
Sbjct: 2212 gcaccagcctcgatgtacttcttagcgttatccca 2178
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>gb|AE011990.1| Xanthomonas axonopodis pv. citri str. 306,  section 368 of 469 of the
            complete genome
          Length = 12292

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 308  ggccccgccgtgtctttgaatggatctccaaccgtatcaccagtaattgcagccttgtga 367
            |||||||| ||||||||| |||| || || || || || || ||||| ||||||||||| 
Sbjct: 5182 ggccccgcggtgtctttgtatgggtcaccgactgtgtcgccggtaatcgcagccttgtgc 5123

                          
Query: 368  gcctcactgccttt 381
            ||||| ||||||||
Sbjct: 5122 gcctcgctgccttt 5109
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>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence, complete
             sequence
          Length = 90498

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                         
Query: 340   cgtatcaccagtaattgcagccttgtgagcctcactgcctttaccaccaagtgcaccagt 399
             |||||||||||| | |||||| ||||| |  ||||| ||||| || || || || |||||
Sbjct: 61240 cgtatcaccagttactgcagctttgtgggaatcacttcctttgcctcctagagctccagt 61181

                                           
Query: 400   ctcgatgtacttcttagcattatcccaagc 429
             ||| ||||| ||||| ||||| ||||||||
Sbjct: 61180 ctcaatgtatttctttgcattgtcccaagc 61151



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 73/90 (81%)
 Strand = Plus / Minus

                                                                         
Query: 247   aaagatcggagccatgaccagtgtgatcgtggcgagcatcttgatgagaacatggatcga 306
             |||||| ||||||||||| || ||||| || || | ||| ||||||||||| || |||||
Sbjct: 61462 aaagataggagccatgacaagcgtgatagtcgccaacattttgatgagaacgtgaatcga 61403

                                           
Query: 307   aggccccgccgtgtctttgaatggatctcc 336
              || || || ||||| ||||| || |||||
Sbjct: 61402 cggtcctgctgtgtccttgaaagggtctcc 61373
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>emb|X83729.1|NTIPTVP31 N.tabacum mRNA for inorganic pyrophosphatase (TVP31 clone)
          Length = 2867

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 395  ccagtctcgatgtacttcttagcattatccca 426
            |||| ||| |||||||||||||||||||||||
Sbjct: 2453 ccagcctcaatgtacttcttagcattatccca 2422
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>gb|AF367446.1| Prunus persica clone Vp1 vacuolar H+-pyrophosphatase (vp1) mRNA,
            complete cds
          Length = 2619

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 392  gcaccagtctcgatgtacttcttagcattatccca 426
            ||||||| ||| ||||||||||||||||| |||||
Sbjct: 2178 gcaccagcctcaatgtacttcttagcattgtccca 2144
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>gb|L32791.1|BEUPYRO Beta vulgaris clone P2 pyrophosphatase mRNA, complete cds
          Length = 2868

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 392  gcaccagtctcgatgtacttcttagcattatccca 426
            ||||||| ||||||||||||||| ||||| |||||
Sbjct: 2287 gcaccagcctcgatgtacttcttggcattgtccca 2253
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>emb|X83728.1|NTIPTVP17 N.tabacum mRNA for inorganic pyrophosphatase (TVP17 clone)
          Length = 1838

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 404  atgtacttcttagcattatccca 426
            |||||||||||||||||||||||
Sbjct: 1416 atgtacttcttagcattatccca 1394
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>gb|AY103622.1| Zea mays PCO084888 mRNA sequence
          Length = 2801

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 392  gcaccagtctcgatgtacttcttagcattatccca 426
            ||||||| ||| ||||||||||||||||| |||||
Sbjct: 2180 gcaccagcctcaatgtacttcttagcattgtccca 2146
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>gb|U31467.1|VRU31467 Vigna radiata pyrophosphatase mRNA, complete cds
          Length = 2522

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 392  gcaccagtctcgatgtacttcttagcattatccca 426
            ||||||| ||| ||||||||||| |||||||||||
Sbjct: 2122 gcaccagcctcaatgtacttctttgcattatccca 2088
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>dbj|AB009077.1| Vigna radiata mRNA for proton pyrophosphatase, complete cds
          Length = 2531

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 392  gcaccagtctcgatgtacttcttagcattatccca 426
            ||||||| ||| ||||||||||| |||||||||||
Sbjct: 2115 gcaccagcctcaatgtacttctttgcattatccca 2081
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>gb|AC151744.23| Medicago truncatula clone mth2-32k10, complete sequence
          Length = 110897

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 404   atgtacttcttagcattatcccaagc 429
             ||||||||||| ||||||||||||||
Sbjct: 43174 atgtacttcttggcattatcccaagc 43149
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>gb|L32792.1|BEUPYROA Beta vulgaris clone P1 pyrophosphatase mRNA, complete cds
          Length = 2801

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 392  gcaccagtctcgatgtacttcttagcattatcccaagc 429
            ||||||| ||| ||||||||||| ||||| ||||||||
Sbjct: 2156 gcaccagcctcaatgtacttcttggcattgtcccaagc 2119
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>dbj|AP006375.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT32M04, TM0219,
             complete sequence
          Length = 72880

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 404   atgtacttcttagcattatcccaagc 429
             ||||||||||| ||||||||||||||
Sbjct: 42498 atgtacttcttggcattatcccaagc 42473
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>dbj|D88820.1| Acetabularia mediterranea mRNA for inorganic pyrophosphatase,
            complete cds
          Length = 3104

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 320  tctttgaatggatctccaaccgtatcacca 349
            |||||||||||||| ||||| |||||||||
Sbjct: 2881 tctttgaatggatcaccaacggtatcacca 2852
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>emb|AL355986.7| Human DNA sequence from clone RP11-516G5 on chromosome 13, complete
             sequence
          Length = 87831

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 122   cctttcaatgtggcaaaacaatactaaaa 150
             ||||||||||||||| ||||||| |||||
Sbjct: 72605 cctttcaatgtggcataacaatattaaaa 72577
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 401     tcgatgtacttcttagcattatcccaagc 429
               |||||||||||||| || |||||||||||
Sbjct: 2554989 tcgatgtacttcttggcgttatcccaagc 2554961
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                            
Query: 301     gatcgaaggccccgccgtgtctttgaatggatctccaaccgtatc 345
               ||||||||| || || ||||| |||||||||||||| || |||||
Sbjct: 5138620 gatcgaagggccggcggtgtccttgaatggatctcccacggtatc 5138576
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>emb|BX571676.5| Zebrafish DNA sequence from clone DKEY-242N5 in linkage group 17,
            complete sequence
          Length = 44074

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 378  ctttaccaccaagtgcaccag 398
            |||||||||||||||||||||
Sbjct: 9535 ctttaccaccaagtgcaccag 9515
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>gb|AC157991.5| Mus musculus chromosome 18, clone RP23-335B10, complete sequence
          Length = 198636

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     tctgtcacagcatatatatt 43
              ||||||||||||||||||||
Sbjct: 190345 tctgtcacagcatatatatt 190364
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>gb|AC102155.10| Mus musculus chromosome 18, clone RP23-334J12, complete sequence
          Length = 189666

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     tctgtcacagcatatatatt 43
              ||||||||||||||||||||
Sbjct: 108288 tctgtcacagcatatatatt 108269
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>gb|AC116130.15| Mus musculus chromosome 17, clone RP23-98F21, complete sequence
          Length = 228842

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    ctgcctttaccaccaagtgc 393
              ||||||||||||||||||||
Sbjct: 126443 ctgcctttaccaccaagtgc 126462
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>gb|AC153972.6| Mus musculus 10 BAC RP24-383P4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 182933

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 372    cactgcctttaccaccaagt 391
              ||||||||||||||||||||
Sbjct: 174810 cactgcctttaccaccaagt 174829
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>gb|AC132608.2| Mus musculus BAC clone RP23-451E12 from chromosome 18, complete sequence
          Length = 201478

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     tctgtcacagcatatatatt 43
              ||||||||||||||||||||
Sbjct: 185109 tctgtcacagcatatatatt 185090
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>emb|AL118511.25|HSDJ858B6 Human DNA sequence from clone RP5-858B6 on chromosome 1q42.13-43
             Contains two novel genes, the gene for a novel protein
             (FLJ14525) and a CpG island, complete sequence
          Length = 90175

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   aaatgggcagcactgaacctctcc 123
             ||||||||||||||||| ||||||
Sbjct: 52715 aaatgggcagcactgaatctctcc 52738
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>emb|AL031687.17|HS998H6 Human DNA sequence from clone RP5-998H6 on chromosome 20q13.1 Contains
             the CDH22 gene for cadherin-like 22, a novel gene and two
             CpG islands, complete sequence
          Length = 147815

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   tatcaccagtaattgcagcc 361
             ||||||||||||||||||||
Sbjct: 66314 tatcaccagtaattgcagcc 66295
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>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 302    atcgaaggccccgccgtgtctttg 325
              |||||||||||| |||||||||||
Sbjct: 171830 atcgaaggcccctccgtgtctttg 171807
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>gb|AC016657.5| Homo sapiens chromosome 5 clone RP1-6C3, complete sequence
          Length = 128447

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 114   gaacctctcctttcaatgtggcaa 137
             |||||||||||| |||||||||||
Sbjct: 26612 gaacctctccttgcaatgtggcaa 26589
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>gb|AC159504.5| Mus musculus 10 BAC RP23-302J6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 201259

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   cactgcctttaccaccaagt 391
             ||||||||||||||||||||
Sbjct: 64673 cactgcctttaccaccaagt 64692
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>gb|AF532114.1| Mus musculus strain 129/SvJ BAC clone citb544e14 from the MHC region,
              complete sequence
          Length = 153869

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 374    ctgcctttaccaccaagtgc 393
              ||||||||||||||||||||
Sbjct: 101412 ctgcctttaccaccaagtgc 101393
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>gb|AC069275.3|AC069275 Homo sapiens chromosome 3 clone RP11-194C9 map 3p, complete sequence
          Length = 151142

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    tgtcacagcatatatattct 45
             ||||||||||||||||||||
Sbjct: 91041 tgtcacagcatatatattct 91060
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>gb|AC023472.4|AC023472 Homo sapiens chromosome 3 clone RP11-156B21 map 3p, complete sequence
          Length = 167220

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    tgtcacagcatatatattct 45
             ||||||||||||||||||||
Sbjct: 54326 tgtcacagcatatatattct 54345
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>emb|AJ278019.1|LES278019 Lycopersicon esculentum partial mRNA for vacuolar-type
           H+-pyrophosphatase (vp1.1 gene)
          Length = 1335

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 395 ccagtctcgatgtacttcttagcattatccca 426
           |||| |||||||||||||||||| || |||||
Sbjct: 869 ccagcctcgatgtacttcttagcgttgtccca 838
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>gb|AC104098.5| Mus musculus BAC clone RP24-372H3 from 5, complete sequence
          Length = 180886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    ttgcagccttgtgagcctca 373
              ||||||||||||||||||||
Sbjct: 127489 ttgcagccttgtgagcctca 127508
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>gb|AC069276.4| Homo sapiens chromosome 3 clone RP11-470E10 map 3p, complete sequence
          Length = 184058

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    tgtcacagcatatatattct 45
             ||||||||||||||||||||
Sbjct: 11455 tgtcacagcatatatattct 11436
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>gb|AC018832.5| Homo sapiens chromosome 3 clone RP11-481O7 map 3p, complete sequence
          Length = 185496

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    tgtcacagcatatatattct 45
             ||||||||||||||||||||
Sbjct: 19991 tgtcacagcatatatattct 20010


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,457,718
Number of Sequences: 3902068
Number of extensions: 3457718
Number of successful extensions: 64250
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 64145
Number of HSP's gapped (non-prelim): 109
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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