ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl04h10 |
|---|---|
| Clone Library Name | barley_pub |
>NOX3_HUMAN (Q9HBY0) NADPH oxidase 3 (EC 1.6.3.-) (gp91phox homolog 3) (GP91-3)| (Mitogenic oxidase 2) Length = 568 Score = 60.1 bits (144), Expect = 3e-09 Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 5/84 (5%) Frame = -3 Query: 404 QALH---HAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPEL 234 QALH H DV++G + +T + RP W + +K++A +H +GVF+CG + L+ L Sbjct: 485 QALHIALHWDENTDVITGLKQKTFYGRPNWNNEFKQIAYNHPSSSIGVFFCGPKALSRTL 544 Query: 233 RRLSHDFSHRTT--TKFVFHKENF 168 +++ H +S F ++KE+F Sbjct: 545 QKMCHLYSSADPRGVHFYYNKESF 568
>NOX3_RAT (Q672K1) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 58.5 bits (140), Expect = 8e-09 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 5/84 (5%) Frame = -3 Query: 404 QALH---HAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPEL 234 QA+H H +DV++G + +T + RP W + +K++A +H +GVF+CG + ++ L Sbjct: 485 QAIHIALHWDESLDVITGLKQKTFYGRPNWNEEFKQIAYNHPSSSIGVFFCGPKAMSKTL 544 Query: 233 RRLSHDFSHRTT--TKFVFHKENF 168 +++ +S F ++KENF Sbjct: 545 QKMCRLYSSSDPRGVHFYYNKENF 568
>CY24B_HUMAN (P04839) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 569 Score = 57.8 bits (138), Expect = 1e-08 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Frame = -3 Query: 401 ALHHAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRR-- 228 A+HH + DV++G + +T + RP W + +K +A H R+GVF CG + L L + Sbjct: 491 AVHHDEEK-DVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQS 549 Query: 227 LSHDFSHRTTTKFVFHKENF 168 +S+ S F+F+KENF Sbjct: 550 ISNSESGPRGVHFIFNKENF 569
>NOX1_HUMAN (Q9Y5S8) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 564 Score = 57.8 bits (138), Expect = 1e-08 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -3 Query: 374 DVVSGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRRLSHDFSHRTTT 195 D+V+G + +T F RP W + + +A H VGVF CG + L LR+ H +S Sbjct: 494 DIVTGLKQKTSFGRPMWDNEFSTIATSHPKSVVGVFLCGPRTLAKSLRKCCHRYSSLDPR 553 Query: 194 K--FVFHKENF 168 K F F+KENF Sbjct: 554 KVQFYFNKENF 564
>CY24B_PIG (P52649) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 beta Length = 484 Score = 57.8 bits (138), Expect = 1e-08 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Frame = -3 Query: 401 ALHHAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRR-- 228 A+HH + DV++G + +T + RP W + +K +A H R+GVF CG + L L + Sbjct: 406 AVHHDEEK-DVITGLKQKTLYGRPNWDNEFKTIASQHPTTRIGVFLCGPEALAETLNKQC 464 Query: 227 LSHDFSHRTTTKFVFHKENF 168 +S+ S F+F+KENF Sbjct: 465 ISNSDSSPRGVHFIFNKENF 484
>NOX3_MOUSE (Q672J9) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 57.8 bits (138), Expect = 1e-08 Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 5/84 (5%) Frame = -3 Query: 404 QALH---HAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPEL 234 QA+H H +DV++G + + + RP W D +K++A +H +GVF+CG + ++ L Sbjct: 485 QAIHIALHWDESLDVITGLKQKAFYGRPNWNDEFKQIAYNHPSSSIGVFFCGSKAMSKTL 544 Query: 233 RRLSHDFS--HRTTTKFVFHKENF 168 +++ +S F ++KENF Sbjct: 545 QKMCRLYSSVDPRGVHFYYNKENF 568
>CY24B_BOVIN (O46522) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 57.4 bits (137), Expect = 2e-08 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 2/101 (1%) Frame = -3 Query: 464 NHCTSVYEEGDARSAMVVMLQALHHAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDHQG 285 N C + ++E A A+HH + DV++G + +T + RP W + +K + H Sbjct: 477 NICLTGWDESQASHF------AMHHDEEK-DVITGLKQKTLYGRPNWDNEFKTIGSQHPN 529 Query: 284 QRVGVFYCGDQKLTPELRR--LSHDFSHRTTTKFVFHKENF 168 R+GVF CG + L L + +S+ S F+F+KENF Sbjct: 530 TRIGVFLCGPEALADTLNKQCISNSDSGPRGVHFIFNKENF 570
>CY24B_BISBI (Q95L74) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 57.4 bits (137), Expect = 2e-08 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 2/101 (1%) Frame = -3 Query: 464 NHCTSVYEEGDARSAMVVMLQALHHAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDHQG 285 N C + ++E A A+HH + DV++G + +T + RP W + +K + H Sbjct: 477 NICLTGWDESQASHF------AMHHDEEK-DVITGLKQKTLYGRPNWDNEFKTIGSQHPN 529 Query: 284 QRVGVFYCGDQKLTPELRR--LSHDFSHRTTTKFVFHKENF 168 R+GVF CG + L L + +S+ S F+F+KENF Sbjct: 530 TRIGVFLCGPEALADTLNKQCISNSDSGPRGVHFIFNKENF 570
>CY24B_MOUSE (Q61093) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 56.2 bits (134), Expect = 4e-08 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 2/80 (2%) Frame = -3 Query: 401 ALHHAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRR-- 228 A+HH + DV++G + +T + RP W + +K +A +H +GVF CG + L L + Sbjct: 492 AVHHDEEK-DVITGLKQKTLYGRPNWDNEFKTIASEHPNTTIGVFLCGPEALAETLSKQS 550 Query: 227 LSHDFSHRTTTKFVFHKENF 168 +S+ S F+F+KENF Sbjct: 551 ISNSESGPRGVHFIFNKENF 570
>NOX1_RAT (Q9WV87) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 563 Score = 52.4 bits (124), Expect = 6e-07 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -3 Query: 374 DVVSGTRVRTHFARPCWRDVYKRVACDHQGQRVGVFYCGDQKLTPELRRLSHDFSHRTTT 195 DV++G + +T F RP W + + R+A H VGVF CG L LR+ +S Sbjct: 493 DVLTGLKQKTSFGRPMWDNEFSRIATAHPKSVVGVFLCGPPTLAKSLRKCCRRYSSLDPR 552 Query: 194 K--FVFHKENF 168 K F F+KE F Sbjct: 553 KVQFYFNKETF 563
>DUOX2_PIG (Q8HZK2) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase p138-tox) Length = 1545 Score = 46.6 bits (109), Expect = 3e-05 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Frame = -3 Query: 461 HCTSVYEEGDARSAMVVMLQALHHAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDH-QG 285 + T + E+ D R+ M+ + + + +G R THF RP + + + H Q Sbjct: 1447 YITQLAEKFDLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFNSLQEVHPQV 1506 Query: 284 QRVGVFYCGDQKLTPELRRLSHDFSHRTTTKFVFHKENF 168 +++GVF CG +T + + + + T FV H ENF Sbjct: 1507 RKIGVFSCGPPGMTKNVEKTCQLINRQDQTHFVHHYENF 1545
>DUOX1_CANFA (Q9MZF4) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) Length = 1551 Score = 46.2 bits (108), Expect = 4e-05 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Frame = -3 Query: 461 HCTSVYEEGDARSAMVVMLQALHHAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDH-QG 285 + T + E+ D R+ M+ + + + +G R THF RP + +K + H Q Sbjct: 1453 YITQLAEKFDLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFKSLQEVHPQV 1512 Query: 284 QRVGVFYCGDQKLTPELRRLSHDFSHRTTTKFVFHKENF 168 +++GVF CG +T + + + + T F H ENF Sbjct: 1513 RKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYENF 1551
>DUOX1_HUMAN (Q9NRD9) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) (Large NOX 1) (Long NOX 1) Length = 1551 Score = 44.3 bits (103), Expect = 2e-04 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Frame = -3 Query: 461 HCTSVYEEGDARSAMVVMLQALHHAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDH-QG 285 + T + E+ D R+ M+ + + + +G R THF RP + + + H Q Sbjct: 1453 YITQLAEKFDLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFNSLQEVHPQV 1512 Query: 284 QRVGVFYCGDQKLTPELRRLSHDFSHRTTTKFVFHKENF 168 +++GVF CG +T + + + + T F H ENF Sbjct: 1513 RKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYENF 1551
>DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1553 Score = 44.3 bits (103), Expect = 2e-04 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Frame = -3 Query: 461 HCTSVYEEGDARSAMVVMLQALHHAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDH-QG 285 + T + E+ D R+ M+ + + + +G R THF RP + + + H Q Sbjct: 1455 YITQLAEKFDLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFNSLQEVHPQV 1514 Query: 284 QRVGVFYCGDQKLTPELRRLSHDFSHRTTTKFVFHKENF 168 +++GVF CG +T + + + + T F H ENF Sbjct: 1515 RKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYENF 1553
>DUOX1_RAT (Q8CIY2) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1551 Score = 43.9 bits (102), Expect = 2e-04 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Frame = -3 Query: 461 HCTSVYEEGDARSAMVVMLQALHHAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDH-QG 285 + T + E+ D R+ M+ + + + +G R THF RP + + + H Q Sbjct: 1453 YITQLAEKFDLRTTMLYICERHFQKVLNRSLFTGLRSVTHFGRPPFEPFFNSLQEVHPQV 1512 Query: 284 QRVGVFYCGDQKLTPELRRLSHDFSHRTTTKFVFHKENF 168 +++GVF CG +T + + + + T F H ENF Sbjct: 1513 RKIGVFSCGPPGMTKNVEKACQLINKQDRTHFSHHYENF 1551
>DUOX2_HUMAN (Q9NRD8) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (NADH/NADPH thyroid oxidase p138-tox) (p138 thyroid oxidase) (Large NOX 2) (Long NOX 2) Length = 1548 Score = 43.1 bits (100), Expect = 3e-04 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Frame = -3 Query: 461 HCTSVYEEGDARSAMVVMLQALHHAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDH-QG 285 + T + E+ D R+ M+ + + + +G R THF RP + + + H Q Sbjct: 1450 YVTQLAEKFDLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFNSLQEVHPQV 1509 Query: 284 QRVGVFYCGDQKLTPELRRLSHDFSHRTTTKFVFHKENF 168 +++GVF CG +T + + + + F+ H ENF Sbjct: 1510 RKIGVFSCGPPGMTKNVEKACQLVNRQDRAHFMHHYENF 1548
>DUOX1_CAEEL (O61213) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (DUOX1)| (NADPH thyroid oxidase 1) (Blistered cuticle protein 3) Length = 1497 Score = 42.4 bits (98), Expect = 6e-04 Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 11/98 (11%) Frame = -3 Query: 455 TSVYEEGDARSAMVVMLQALHHA-KSGVDVVSGTRVRTHFARPCWRDVYKRVACDHQGQ- 282 T + + D R+ M+ + + A SG+ + +G + HF RP ++ ++ + +H+ Q Sbjct: 1399 TQTFHKFDLRTTMLYICEKHFRATNSGISMFTGLHAKNHFGRPNFKAFFQFIQSEHKEQS 1458 Query: 281 RVGVFYCGDQKLTPEL---------RRLSHDFSHRTTT 195 ++GVF CG L + +R + F+HR T Sbjct: 1459 KIGVFSCGPVNLNESIAEGCADANRQRDAPSFAHRFET 1496
>DUOX2_RAT (Q9ES45) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2) (Large NOX 2) (Long NOX 2) Length = 1517 Score = 41.2 bits (95), Expect = 0.001 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 1/99 (1%) Frame = -3 Query: 461 HCTSVYEEGDARSAMVVMLQALHHAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDH-QG 285 + T + E+ D R+ M+ + + + +G R THF RP + + H Q Sbjct: 1419 YITQLAEKFDLRTTMLYICERHFQKVLNRSLFTGLRSVTHFGRPPFELFLDSLQEVHPQV 1478 Query: 284 QRVGVFYCGDQKLTPELRRLSHDFSHRTTTKFVFHKENF 168 ++GVF CG +T + + + + FV H ENF Sbjct: 1479 HKIGVFSCGPPGMTKNVEKACQLINRQDRAHFVHHYENF 1517
>DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1475 Score = 40.0 bits (92), Expect = 0.003 Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 2/98 (2%) Frame = -3 Query: 455 TSVYEEGDARSAMVVMLQALHHAKSGVDVVSGTRVRTHFARPCWRDVYKRVACDHQ-GQR 279 T + + D R+ M+ + + S + +G + HF RP K V H + Sbjct: 1377 TQFFHKFDLRTTMLYICENHFQRLSKTSIFTGLKAVNHFGRPDMSSFLKFVQKKHSYVSK 1436 Query: 278 VGVFYCGDQKLTPELRRLSHDFSH-RTTTKFVFHKENF 168 +GVF CG + LT + + + R F+ H ENF Sbjct: 1437 IGVFSCGPRPLTKSVMSACDEVNKTRKLPYFIHHFENF 1474 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,140,913 Number of Sequences: 219361 Number of extensions: 924589 Number of successful extensions: 2269 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 2229 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2261 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
