ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl04h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 254 2e-64
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 254 2e-64
3emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa... 254 2e-64
4gb|BT009119.1| Triticum aestivum clone wl1n.pk0005.c8:fis, full ... 119 8e-24
5gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome... 117 3e-23
6gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 117 3e-23
7dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
8gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 117 3e-23
9ref|NM_120821.2| Arabidopsis thaliana ATRBOHA; calcium ion bindi... 50 0.007
10gb|BT003857.1| Arabidopsis thaliana clone RAFL15-01-J08 (R20364)... 50 0.007
11gb|AF055353.1|AF055353 Arabidopsis thaliana respiratory burst ox... 50 0.007
12emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC... 50 0.007
13gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5... 44 0.40
14emb|AL158050.8| Human DNA sequence from clone RP3-437C15 on chro... 44 0.40
15gb|AF382348.1| Cryptosporidium wrairi isolate 517 actin gene, pa... 44 0.40
16dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 44 0.40
17gb|AC003953.1| Homo sapiens chromosome 9, P1 clone 8660 (LBNL H1... 42 1.6
18gb|AC158918.7| Mus musculus chromosome 15, clone RP23-106N12, co... 42 1.6
19ref|XM_414752.1| PREDICTED: Gallus gallus similar to transformat... 42 1.6
20gb|AY350714.1| Olimarabidopsis pumila clone BAC Op37I22, complet... 42 1.6
21emb|AL391475.7| Human DNA sequence from clone RP11-33G16 on chro... 42 1.6
22gb|AC084388.1| Mus musculus clone RP23-132G6, complete sequence 42 1.6
23gb|AC121223.5| Rattus norvegicus BAC CH230-70M4 (Children's Hos... 42 1.6
24dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticu... 42 1.6
25gb|AC107751.11| Mus musculus chromosome 15, clone RP23-244L21, c... 42 1.6
26gb|AC104772.3| Homo sapiens BAC clone RP11-3I22 from 2, complete... 42 1.6
27gb|AC083910.9| Mus musculus 1 BAC RP23-337F12 (Roswell Park Canc... 42 1.6
28dbj|AP001892.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.6
29dbj|AP000798.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.6
30gb|AC110118.8| Rattus norvegicus BAC CH230-310N6 (Children's Ho... 42 1.6
31gb|AC170750.2| Mus musculus BAC clone RP23-295C23 from chromosom... 42 1.6
32gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.3
33gb|AC115799.10| Mus musculus chromosome 6, clone RP23-406G9, com... 40 6.3
34gb|AC123834.4| Mus musculus BAC clone RP24-132N9 from chromosome... 40 6.3
35gb|AC116325.5| Mus musculus BAC clone RP23-295K3 from 10, comple... 40 6.3
36emb|CR729258.2|CNS0GPN4 Tetraodon nigroviridis full-length cDNA 40 6.3
37gb|DQ445701.1| Dobsonia minor voucher MVZ 140208 von Willebrand ... 40 6.3
38gb|DQ445698.1| Nyctimene vizcaccia voucher AMCC 124208 von Wille... 40 6.3
39emb|AL138885.21| Human DNA sequence from clone RP1-290I10 on chr... 40 6.3
40emb|AL049774.1|HS10618B Human DNA sequence from clone RP5-1061O1... 40 6.3
41gb|AC155168.3| Mus musculus BAC clone RP23-208M17 from chromosom... 40 6.3
42gb|AC153982.8| Mus musculus 6 BAC RP24-280G3 (Roswell Park Cance... 40 6.3
43gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.3
44gb|AC106716.3| Homo sapiens 3 BAC RP11-202P1 (Roswell Park Cance... 40 6.3
45gb|AC110053.3| Homo sapiens chromosome 8, clone CTD-3145H4, comp... 40 6.3
46gb|AC117424.6| Homo sapiens 3 BAC RP11-172I10 (Roswell Park Canc... 40 6.3
47gb|AC107904.6| Homo sapiens chromosome 8, clone RP11-644K4, comp... 40 6.3
48gb|AC068992.31| Homo sapiens 8 BAC RP11-406I9 (Roswell Park Canc... 40 6.3
49gb|AC090094.5| Homo sapiens chromosome 8, clone RP11-252C19, com... 40 6.3
50dbj|AK147351.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 6.3
51dbj|AK169437.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 6.3
52gb|AC090518.2|AC090518 Homo sapiens chromosome 15 clone RP11-566... 40 6.3
53gb|AF226849.1|AF226849 Megaptera novaeangliae von Willebrand fac... 40 6.3
54gb|AC128656.9| Homo sapiens 3 BAC RP13-651H24 (Roswell Park Canc... 40 6.3
55gb|AF304109.1|AF304109 Megaptera novaeangliae von Willebrand fac... 40 6.3
56emb|AL929502.10| Zebrafish DNA sequence from clone CH211-69G19 i... 40 6.3
57ref|NM_001033354.1| Mus musculus IQ motif and Sec7 domain 3 (Iqs... 40 6.3
58dbj|AP003120.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.3
59dbj|AK122446.1| Mus musculus mRNA for mKIAA1110 protein 40 6.3
60gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.3
61gb|AC140933.1| Gallus gallus BAC clone TAM31-60P10 from chromoso... 40 6.3
62emb|BX465849.10| Zebrafish DNA sequence from clone DKEY-263L8 in... 40 6.3 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  254 bits (128), Expect = 2e-64
 Identities = 257/300 (85%)
 Strand = Plus / Minus

                                                                            
Query: 167      agaagttctccttgtggaagacgaacttggtggtggtccggtgcgagaagtcgtgcgaca 226
                |||| |||||||||||||||||||| ||||||||||||  ||| |||||||| || |  |
Sbjct: 21687021 agaaattctccttgtggaagacgaatttggtggtggtcttgtgggagaagtcctgggcga 21686962

                                                                            
Query: 227      gccgcctgagctccggcgtgagcttctggtcgccgcagtagaagaccccgacgcgctgcc 286
                | || | ||||||||||||||||  ||||||||||||| ||||||| |||||||||||||
Sbjct: 21686961 ggcggcggagctccggcgtgagcgcctggtcgccgcagaagaagacgccgacgcgctgcc 21686902

                                                                            
Query: 287      cctggtggtcgcaggcgacgcgcttgtagacgtcgcgccagcagggcctggcgaagtgcg 346
                |||||||||    ||||||||||||| | |||||||||||||  || |  |||||||| |
Sbjct: 21686901 cctggtggttcacggcgacgcgcttgaacacgtcgcgccagctcgggcgcgcgaagtggg 21686842

                                                                            
Query: 347      tgcggacgcgggtcccggagacgacgtcgacgccgctcttggcgtgatggagcgcctgca 406
                |||| || || |||||||| || ||||| |||||| |||||||||| ||||||||||| |
Sbjct: 21686841 tgcgcacccgcgtcccggacaccacgtccacgccgttcttggcgtggtggagcgcctgga 21686782

                                                                            
Query: 407      gcatcaccaccatggccgaccgcgcgtcgccttcctcgtacacgctggtgcagtggttgt 466
                |||||  |||||  |||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 21686781 gcatcgtcaccagcgccgaccgcgcgtccccctcctcgtacacgctggtgcagtggttgt 21686722
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  254 bits (128), Expect = 2e-64
 Identities = 257/300 (85%)
 Strand = Plus / Minus

                                                                            
Query: 167      agaagttctccttgtggaagacgaacttggtggtggtccggtgcgagaagtcgtgcgaca 226
                |||| |||||||||||||||||||| ||||||||||||  ||| |||||||| || |  |
Sbjct: 21615366 agaaattctccttgtggaagacgaatttggtggtggtcttgtgggagaagtcctgggcga 21615307

                                                                            
Query: 227      gccgcctgagctccggcgtgagcttctggtcgccgcagtagaagaccccgacgcgctgcc 286
                | || | ||||||||||||||||  ||||||||||||| ||||||| |||||||||||||
Sbjct: 21615306 ggcggcggagctccggcgtgagcgcctggtcgccgcagaagaagacgccgacgcgctgcc 21615247

                                                                            
Query: 287      cctggtggtcgcaggcgacgcgcttgtagacgtcgcgccagcagggcctggcgaagtgcg 346
                |||||||||    ||||||||||||| | |||||||||||||  || |  |||||||| |
Sbjct: 21615246 cctggtggttcacggcgacgcgcttgaacacgtcgcgccagctcgggcgcgcgaagtggg 21615187

                                                                            
Query: 347      tgcggacgcgggtcccggagacgacgtcgacgccgctcttggcgtgatggagcgcctgca 406
                |||| || || |||||||| || ||||| |||||| |||||||||| ||||||||||| |
Sbjct: 21615186 tgcgcacccgcgtcccggacaccacgtccacgccgttcttggcgtggtggagcgcctgga 21615127

                                                                            
Query: 407      gcatcaccaccatggccgaccgcgcgtcgccttcctcgtacacgctggtgcagtggttgt 466
                |||||  |||||  |||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 21615126 gcatcgtcaccagcgccgaccgcgcgtccccctcctcgtacacgctggtgcagtggttgt 21615067
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>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 186030

 Score =  254 bits (128), Expect = 2e-64
 Identities = 257/300 (85%)
 Strand = Plus / Plus

                                                                          
Query: 167    agaagttctccttgtggaagacgaacttggtggtggtccggtgcgagaagtcgtgcgaca 226
              |||| |||||||||||||||||||| ||||||||||||  ||| |||||||| || |  |
Sbjct: 125530 agaaattctccttgtggaagacgaatttggtggtggtcttgtgggagaagtcctgggcga 125589

                                                                          
Query: 227    gccgcctgagctccggcgtgagcttctggtcgccgcagtagaagaccccgacgcgctgcc 286
              | || | ||||||||||||||||  ||||||||||||| ||||||| |||||||||||||
Sbjct: 125590 ggcggcggagctccggcgtgagcgcctggtcgccgcagaagaagacgccgacgcgctgcc 125649

                                                                          
Query: 287    cctggtggtcgcaggcgacgcgcttgtagacgtcgcgccagcagggcctggcgaagtgcg 346
              |||||||||    ||||||||||||| | |||||||||||||  || |  |||||||| |
Sbjct: 125650 cctggtggttcacggcgacgcgcttgaacacgtcgcgccagctcgggcgcgcgaagtggg 125709

                                                                          
Query: 347    tgcggacgcgggtcccggagacgacgtcgacgccgctcttggcgtgatggagcgcctgca 406
              |||| || || |||||||| || ||||| |||||| |||||||||| ||||||||||| |
Sbjct: 125710 tgcgcacccgcgtcccggacaccacgtccacgccgttcttggcgtggtggagcgcctgga 125769

                                                                          
Query: 407    gcatcaccaccatggccgaccgcgcgtcgccttcctcgtacacgctggtgcagtggttgt 466
              |||||  |||||  |||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 125770 gcatcgtcaccagcgccgaccgcgcgtccccctcctcgtacacgctggtgcagtggttgt 125829
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>gb|BT009119.1| Triticum aestivum clone wl1n.pk0005.c8:fis, full insert mRNA
           sequence
          Length = 543

 Score =  119 bits (60), Expect = 8e-24
 Identities = 240/300 (80%)
 Strand = Plus / Minus

                                                                       
Query: 167 agaagttctccttgtggaagacgaacttggtggtggtccggtgcgagaagtcgtgcgaca 226
           |||||||||||||||||||  ||||||||||| |||||    |||||||||| |||| ||
Sbjct: 375 agaagttctccttgtggaactcgaacttggtgttggtcttccgcgagaagtcctgcgcca 316

                                                                       
Query: 227 gccgcctgagctccggcgtgagcttctggtcgccgcagtagaagaccccgacgcgctgcc 286
           ||   |  ||||||   || |||  | || ||||||||||||| || |||||||||||  
Sbjct: 315 gctcgcgcagctccttggtcagcaccggggcgccgcagtagaacactccgacgcgctggt 256

                                                                       
Query: 287 cctggtggtcgcaggcgacgcgcttgtagacgtcgcgccagcagggcctggcgaagtgcg 346
            |||||||| |   |||| |||||||||||||| |||||||   |||||||||||||| |
Sbjct: 255 tctggtggttgagcgcgatgcgcttgtagacgttgcgccagttaggcctggcgaagtggg 196

                                                                       
Query: 347 tgcggacgcgggtcccggagacgacgtcgacgccgctcttggcgtgatggagcgcctgca 406
           |   ||||||||| ||||| || ||||||||||||  ||||||||| | ||||| ||| |
Sbjct: 195 tcttgacgcgggtgccggacaccacgtcgacgccgtgcttggcgtggttgagcgactgga 136

                                                                       
Query: 407 gcatcaccaccatggccgaccgcgcgtcgccttcctcgtacacgctggtgcagtggttgt 466
           ||||  | |  |  || ||||| ||||| ||||||||||||||||||||||||| |||||
Sbjct: 135 gcatggcgatgagcgcggaccgggcgtccccttcctcgtacacgctggtgcagtagttgt 76
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>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08,
              complete sequence
          Length = 197156

 Score =  117 bits (59), Expect = 3e-23
 Identities = 140/167 (83%)
 Strand = Plus / Plus

                                                                          
Query: 300    ggcgacgcgcttgtagacgtcgcgccagcagggcctggcgaagtgcgtgcggacgcgggt 359
              ||||| |||||||||||||| |||||||  ||| | ||||||||| ||   |||||||||
Sbjct: 189610 ggcgatgcgcttgtagacgttgcgccagttggggcgggcgaagtgggtcttgacgcgggt 189669

                                                                          
Query: 360    cccggagacgacgtcgacgccgctcttggcgtgatggagcgcctgcagcatcaccaccat 419
               |||||||||||||||||||||  ||||||||| | ||||| ||| |||||  | |  | 
Sbjct: 189670 gccggagacgacgtcgacgccgtgcttggcgtggttgagcgactggagcatagcgatgag 189729

                                                             
Query: 420    ggccgaccgcgcgtcgccttcctcgtacacgctggtgcagtggttgt 466
               |||||||| ||||| ||||||||||||||||||||||||| |||||
Sbjct: 189730 cgccgaccgggcgtccccttcctcgtacacgctggtgcagtagttgt 189776
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>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0041J17, complete sequence
          Length = 148829

 Score =  117 bits (59), Expect = 3e-23
 Identities = 140/167 (83%)
 Strand = Plus / Plus

                                                                         
Query: 300   ggcgacgcgcttgtagacgtcgcgccagcagggcctggcgaagtgcgtgcggacgcgggt 359
             ||||| |||||||||||||| |||||||  ||| | ||||||||| ||   |||||||||
Sbjct: 28965 ggcgatgcgcttgtagacgttgcgccagttggggcgggcgaagtgggtcttgacgcgggt 29024

                                                                         
Query: 360   cccggagacgacgtcgacgccgctcttggcgtgatggagcgcctgcagcatcaccaccat 419
              |||||||||||||||||||||  ||||||||| | ||||| ||| |||||  | |  | 
Sbjct: 29025 gccggagacgacgtcgacgccgtgcttggcgtggttgagcgactggagcatagcgatgag 29084

                                                            
Query: 420   ggccgaccgcgcgtcgccttcctcgtacacgctggtgcagtggttgt 466
              |||||||| ||||| ||||||||||||||||||||||||| |||||
Sbjct: 29085 cgccgaccgggcgtccccttcctcgtacacgctggtgcagtagttgt 29131
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  117 bits (59), Expect = 3e-23
 Identities = 140/167 (83%)
 Strand = Plus / Plus

                                                                            
Query: 300      ggcgacgcgcttgtagacgtcgcgccagcagggcctggcgaagtgcgtgcggacgcgggt 359
                ||||| |||||||||||||| |||||||  ||| | ||||||||| ||   |||||||||
Sbjct: 18925594 ggcgatgcgcttgtagacgttgcgccagttggggcgggcgaagtgggtcttgacgcgggt 18925653

                                                                            
Query: 360      cccggagacgacgtcgacgccgctcttggcgtgatggagcgcctgcagcatcaccaccat 419
                 |||||||||||||||||||||  ||||||||| | ||||| ||| |||||  | |  | 
Sbjct: 18925654 gccggagacgacgtcgacgccgtgcttggcgtggttgagcgactggagcatagcgatgag 18925713

                                                               
Query: 420      ggccgaccgcgcgtcgccttcctcgtacacgctggtgcagtggttgt 466
                 |||||||| ||||| ||||||||||||||||||||||||| |||||
Sbjct: 18925714 cgccgaccgggcgtccccttcctcgtacacgctggtgcagtagttgt 18925760
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  117 bits (59), Expect = 3e-23
 Identities = 140/167 (83%)
 Strand = Plus / Plus

                                                                            
Query: 300      ggcgacgcgcttgtagacgtcgcgccagcagggcctggcgaagtgcgtgcggacgcgggt 359
                ||||| |||||||||||||| |||||||  ||| | ||||||||| ||   |||||||||
Sbjct: 19084416 ggcgatgcgcttgtagacgttgcgccagttggggcgggcgaagtgggtcttgacgcgggt 19084475

                                                                            
Query: 360      cccggagacgacgtcgacgccgctcttggcgtgatggagcgcctgcagcatcaccaccat 419
                 |||||||||||||||||||||  ||||||||| | ||||| ||| |||||  | |  | 
Sbjct: 19084476 gccggagacgacgtcgacgccgtgcttggcgtggttgagcgactggagcatagcgatgag 19084535

                                                               
Query: 420      ggccgaccgcgcgtcgccttcctcgtacacgctggtgcagtggttgt 466
                 |||||||| ||||| ||||||||||||||||||||||||| |||||
Sbjct: 19084536 cgccgaccgggcgtccccttcctcgtacacgctggtgcagtagttgt 19084582
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>ref|NM_120821.2| Arabidopsis thaliana ATRBOHA; calcium ion binding / oxidoreductase
            AT5G07390 (ATRBOHA) mRNA, complete cds
          Length = 3062

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 424  gaccgcgcgtcgccttcctcgtacacgctggtgcagt 460
            |||| |||||| ||||||||||| |||||||||||||
Sbjct: 2635 gacctcgcgtccccttcctcgtaaacgctggtgcagt 2599
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>gb|BT003857.1| Arabidopsis thaliana clone RAFL15-01-J08 (R20364) putative
            respiratory burst oxidase protein A (At5g07390) mRNA,
            complete cds
          Length = 3078

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 424  gaccgcgcgtcgccttcctcgtacacgctggtgcagt 460
            |||| |||||| ||||||||||| |||||||||||||
Sbjct: 2635 gacctcgcgtccccttcctcgtaaacgctggtgcagt 2599
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>gb|AF055353.1|AF055353 Arabidopsis thaliana respiratory burst oxidase protein A (RbohA)
            gene, complete cds
          Length = 3888

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 424  gaccgcgcgtcgccttcctcgtacacgctggtgcagt 460
            |||| |||||| ||||||||||| |||||||||||||
Sbjct: 3359 gacctcgcgtccccttcctcgtaaacgctggtgcagt 3323
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>emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC clone T2I1 (ESSA project)
          Length = 116763

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 424   gaccgcgcgtcgccttcctcgtacacgctggtgcagt 460
             |||| |||||| ||||||||||| |||||||||||||
Sbjct: 51573 gacctcgcgtccccttcctcgtaaacgctggtgcagt 51609
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>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete
             sequence
          Length = 249995

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 141   ttaagttaacatgtggaattta 162
             ||||||||||||||||||||||
Sbjct: 73667 ttaagttaacatgtggaattta 73646
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>emb|AL158050.8| Human DNA sequence from clone RP3-437C15 on chromosome 6 Contains a
             Wilms' tumour 1-associating protein (WTAP) (KIAA0105)
             pseudogene, complete sequence
          Length = 149679

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 142   taagttaacatgtggaatttat 163
             ||||||||||||||||||||||
Sbjct: 69822 taagttaacatgtggaatttat 69801
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>gb|AF382348.1| Cryptosporidium wrairi isolate 517 actin gene, partial cds
          Length = 1062

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 30  tacgaagaagaaatgaagaaat 51
           ||||||||||||||||||||||
Sbjct: 633 tacgaagaagaaatgaagaaat 654
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 404     gcagcatcaccaccatggccga 425
               ||||||||||||||||||||||
Sbjct: 2740442 gcagcatcaccaccatggccga 2740421
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>gb|AC003953.1| Homo sapiens chromosome 9, P1 clone 8660 (LBNL H105), complete sequence
          Length = 75871

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 153   gtggaatttatctcagaagtt 173
             |||||||||||||||||||||
Sbjct: 57014 gtggaatttatctcagaagtt 57034
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>gb|AC158918.7| Mus musculus chromosome 15, clone RP23-106N12, complete sequence
          Length = 209747

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 33     gaagaagaaatgaagaaatgt 53
              |||||||||||||||||||||
Sbjct: 100926 gaagaagaaatgaagaaatgt 100906
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>ref|XM_414752.1| PREDICTED: Gallus gallus similar to transformation/transcription
             domain-associated protein (LOC416440), mRNA
          Length = 12717

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 325   cagcagggcctggcgaagtgc 345
             |||||||||||||||||||||
Sbjct: 11158 cagcagggcctggcgaagtgc 11178
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>gb|AY350714.1| Olimarabidopsis pumila clone BAC Op37I22, complete sequence
          Length = 84869

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 424   gaccgcgcgtcgccttcctcgtacacgctggtgcagt 460
             |||| |||||| ||||||||||| ||||| |||||||
Sbjct: 21916 gacctcgcgtctccttcctcgtagacgctagtgcagt 21952
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>emb|AL391475.7| Human DNA sequence from clone RP11-33G16 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 163058

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 153   gtggaatttatctcagaagtt 173
             |||||||||||||||||||||
Sbjct: 65306 gtggaatttatctcagaagtt 65326
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>gb|AC084388.1| Mus musculus clone RP23-132G6, complete sequence
          Length = 208754

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 33     gaagaagaaatgaagaaatgt 53
              |||||||||||||||||||||
Sbjct: 196759 gaagaagaaatgaagaaatgt 196739
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>gb|AC121223.5| Rattus norvegicus  BAC CH230-70M4 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 263147

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 27     aggtacgaagaagaaatgaagaaat 51
              |||||||||||||||||||| ||||
Sbjct: 219181 aggtacgaagaagaaatgaaaaaat 219157
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>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA,
              complete genome
          Length = 2516575

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 30     tacgaagaagaaatgaagaaa 50
              |||||||||||||||||||||
Sbjct: 190589 tacgaagaagaaatgaagaaa 190609
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>gb|AC107751.11| Mus musculus chromosome 15, clone RP23-244L21, complete sequence
          Length = 188768

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 33    gaagaagaaatgaagaaatgt 53
             |||||||||||||||||||||
Sbjct: 52453 gaagaagaaatgaagaaatgt 52473
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>gb|AC104772.3| Homo sapiens BAC clone RP11-3I22 from 2, complete sequence
          Length = 106526

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 153   gtggaatttatctcagaagtt 173
             |||||||||||||||||||||
Sbjct: 99195 gtggaatttatctcagaagtt 99215
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>gb|AC083910.9| Mus musculus 1 BAC RP23-337F12 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 208408

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 232   ctgagctccggcgtgagcttctggt 256
             ||||||||||| |||||||||||||
Sbjct: 35870 ctgagctccggggtgagcttctggt 35894
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>dbj|AP001892.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-49M9, complete
             sequences
          Length = 144308

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    aagtgaataaaatgtatatgt 112
             |||||||||||||||||||||
Sbjct: 12021 aagtgaataaaatgtatatgt 12001
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>dbj|AP000798.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-43E2, complete
             sequences
          Length = 113054

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    aagtgaataaaatgtatatgt 112
             |||||||||||||||||||||
Sbjct: 58505 aagtgaataaaatgtatatgt 58485
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>gb|AC110118.8| Rattus norvegicus  BAC CH230-310N6 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 175663

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 27     aggtacgaagaagaaatgaagaaat 51
              |||||||||||||||||||| ||||
Sbjct: 130355 aggtacgaagaagaaatgaaaaaat 130331
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>gb|AC170750.2| Mus musculus BAC clone RP23-295C23 from chromosome 1, complete sequence
          Length = 203110

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 232    ctgagctccggcgtgagcttctggt 256
              ||||||||||| |||||||||||||
Sbjct: 109168 ctgagctccggggtgagcttctggt 109192
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    agaagtcgtgcgacagccgc 231
              ||||||||||||||||||||
Sbjct: 657187 agaagtcgtgcgacagccgc 657168
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>gb|AC115799.10| Mus musculus chromosome 6, clone RP23-406G9, complete sequence
          Length = 227078

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 395   ggagcgcctgcagcatcaccacca 418
             |||||||||||| |||||||||||
Sbjct: 28926 ggagcgcctgcaccatcaccacca 28903
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>gb|AC123834.4| Mus musculus BAC clone RP24-132N9 from chromosome 13, complete sequence
          Length = 153028

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    agcaagtgaataaaatgtat 108
             ||||||||||||||||||||
Sbjct: 23359 agcaagtgaataaaatgtat 23340
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>gb|AC116325.5| Mus musculus BAC clone RP23-295K3 from 10, complete sequence
          Length = 196265

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 93     agtgaataaaatgtatatgtactg 116
              ||||||||||||| ||||||||||
Sbjct: 171519 agtgaataaaatgaatatgtactg 171542
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>emb|CR729258.2|CNS0GPN4 Tetraodon nigroviridis full-length cDNA
          Length = 1651

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 164  ctcagaagttctccttgtggaagacgaacttg 195
            |||| ||||||||||||| ||||| |||||||
Sbjct: 1362 ctcaaaagttctccttgttgaagatgaacttg 1331
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>gb|DQ445701.1| Dobsonia minor voucher MVZ 140208 von Willebrand factor (vWF) gene,
           partial cds
          Length = 1231

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 ggcgtgatggagcgcctgca 406
           ||||||||||||||||||||
Sbjct: 191 ggcgtgatggagcgcctgca 210
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>gb|DQ445698.1| Nyctimene vizcaccia voucher AMCC 124208 von Willebrand factor (vWF)
           gene, partial cds
          Length = 1231

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 ggcgtgatggagcgcctgca 406
           ||||||||||||||||||||
Sbjct: 191 ggcgtgatggagcgcctgca 210
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>emb|AL138885.21| Human DNA sequence from clone RP1-290I10 on chromosome 6 Contains a
             ribosomal protein L7 (RPL7) pseudogene, the TFAP2A gene
             for transcription factor AP-2 alpha (activating
             enhancer-binding protein 2 alpha), four novel genes, a
             mitochondrial ribosomal protein L47 (MRPL47) pseudogene
             and 11 CpG islands, complete sequence
          Length = 180133

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    agcaagtgaataaaatgtat 108
             ||||||||||||||||||||
Sbjct: 85475 agcaagtgaataaaatgtat 85494
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>emb|AL049774.1|HS10618B Human DNA sequence from clone RP5-1061O18 on chromosome
            22q13.32-13.33 Contains an STS and GSSs, complete
            sequence
          Length = 26584

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  gacgcgctgcccctggtggt 295
            ||||||||||||||||||||
Sbjct: 8731 gacgcgctgcccctggtggt 8712
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>gb|AC155168.3| Mus musculus BAC clone RP23-208M17 from chromosome 10, complete
             sequence
          Length = 174112

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 93    agtgaataaaatgtatatgtactg 116
             ||||||||||||| ||||||||||
Sbjct: 52777 agtgaataaaatgaatatgtactg 52800
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>gb|AC153982.8| Mus musculus 6 BAC RP24-280G3 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 163461

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 395    ggagcgcctgcagcatcaccacca 418
              |||||||||||| |||||||||||
Sbjct: 137566 ggagcgcctgcaccatcaccacca 137543
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 271     accccgacgcgctgcccctggtgg 294
               ||||||||| ||||||||||||||
Sbjct: 4460003 accccgacgtgctgcccctggtgg 4459980
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>gb|AC106716.3| Homo sapiens 3 BAC RP11-202P1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152883

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     agaagaaatgaagaaatgta 54
              ||||||||||||||||||||
Sbjct: 104099 agaagaaatgaagaaatgta 104118
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>gb|AC110053.3| Homo sapiens chromosome 8, clone CTD-3145H4, complete sequence
          Length = 142225

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    taacatgtggaatttatctc 166
              ||||||||||||||||||||
Sbjct: 117405 taacatgtggaatttatctc 117424
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>gb|AC117424.6| Homo sapiens 3 BAC RP11-172I10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 136511

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    agaagaaatgaagaaatgta 54
             ||||||||||||||||||||
Sbjct: 98549 agaagaaatgaagaaatgta 98530
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>gb|AC107904.6| Homo sapiens chromosome 8, clone RP11-644K4, complete sequence
          Length = 171676

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   taacatgtggaatttatctc 166
             ||||||||||||||||||||
Sbjct: 81988 taacatgtggaatttatctc 81969
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>gb|AC068992.31| Homo sapiens 8 BAC RP11-406I9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 143611

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    aagaagaaatgaagaaatgt 53
             ||||||||||||||||||||
Sbjct: 70358 aagaagaaatgaagaaatgt 70377
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>gb|AC090094.5| Homo sapiens chromosome 8, clone RP11-252C19, complete sequence
          Length = 158404

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    gaagaagaaatgaagaaatg 52
             ||||||||||||||||||||
Sbjct: 81391 gaagaagaaatgaagaaatg 81410
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>dbj|AK147351.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1018J21 product:similar to capicua (Drosophila)
            homolog [Homo sapiens], full insert sequence
          Length = 7468

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 395  ggagcgcctgcagcatcaccacca 418
            |||||||||||| |||||||||||
Sbjct: 3927 ggagcgcctgcaccatcaccacca 3950
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>dbj|AK169437.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M421501D06 product:similar to capicua (Drosophila)
            homolog [Homo sapiens], full insert sequence
          Length = 6840

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 395  ggagcgcctgcagcatcaccacca 418
            |||||||||||| |||||||||||
Sbjct: 3302 ggagcgcctgcaccatcaccacca 3325
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>gb|AC090518.2|AC090518 Homo sapiens chromosome 15 clone RP11-566D24 map 15q21.3, complete
              sequence
          Length = 188644

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     gaagaagaaatgaagaaatg 52
              ||||||||||||||||||||
Sbjct: 138966 gaagaagaaatgaagaaatg 138985
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>gb|AF226849.1|AF226849 Megaptera novaeangliae von Willebrand factor gene, partial cds
          Length = 1232

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 ggcgtgatggagcgcctgca 406
           ||||||||||||||||||||
Sbjct: 193 ggcgtgatggagcgcctgca 212
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>gb|AC128656.9| Homo sapiens 3 BAC RP13-651H24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 80993

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    aagaagaaatgaagaaatgt 53
             ||||||||||||||||||||
Sbjct: 28731 aagaagaaatgaagaaatgt 28750
to top
>gb|AF304109.1|AF304109 Megaptera novaeangliae von Willebrand factor (vWf) gene, partial
           cds
          Length = 1233

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 387 ggcgtgatggagcgcctgca 406
           ||||||||||||||||||||
Sbjct: 194 ggcgtgatggagcgcctgca 213
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>emb|AL929502.10| Zebrafish DNA sequence from clone CH211-69G19 in linkage group 16,
             complete sequence
          Length = 165617

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    gtgaataaaatgtatatgta 113
             ||||||||||||||||||||
Sbjct: 11899 gtgaataaaatgtatatgta 11880
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>ref|NM_001033354.1| Mus musculus IQ motif and Sec7 domain 3 (Iqsec3), mRNA
          Length = 6840

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 395  ggagcgcctgcagcatcaccacca 418
            |||||||||||| |||||||||||
Sbjct: 3302 ggagcgcctgcaccatcaccacca 3325
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>dbj|AP003120.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-657K20, complete
             sequence
          Length = 189499

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 82    agtaaacagcaagtgaataaaatg 105
             ||||||||||| ||||||||||||
Sbjct: 80028 agtaaacagcaggtgaataaaatg 80005
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>dbj|AK122446.1| Mus musculus mRNA for mKIAA1110 protein
          Length = 6557

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 395  ggagcgcctgcagcatcaccacca 418
            |||||||||||| |||||||||||
Sbjct: 3018 ggagcgcctgcaccatcaccacca 3041
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 203     tccggtgcgagaagtcgtgc 222
               ||||||||||||||||||||
Sbjct: 3187958 tccggtgcgagaagtcgtgc 3187977
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>gb|AC140933.1| Gallus gallus BAC clone TAM31-60P10 from chromosome ul, complete
             sequence
          Length = 119242

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    agcaagtgaataaaatgtat 108
             ||||||||||||||||||||
Sbjct: 90860 agcaagtgaataaaatgtat 90879
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>emb|BX465849.10| Zebrafish DNA sequence from clone DKEY-263L8 in linkage group 1,
             complete sequence
          Length = 136195

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 36    gaagaaatgaagaaatgtacatgc 59
             |||||||||||||||||| |||||
Sbjct: 22721 gaagaaatgaagaaatgttcatgc 22744


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,914,158
Number of Sequences: 3902068
Number of extensions: 3914158
Number of successful extensions: 85074
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84505
Number of HSP's gapped (non-prelim): 559
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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