Clone Name | rbastl04h05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, co... | 36 | 7.3 | 2 | emb|CR974412.1| M.murinus DNA sequence from clone CH257-37C10, c... | 36 | 7.3 | 3 | emb|AL807245.17| Mouse DNA sequence from clone RP23-102B2 on chr... | 36 | 7.3 | 4 | emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chro... | 36 | 7.3 |
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>gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, complete sequence Length = 166568 Score = 36.2 bits (18), Expect = 7.3 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 aaactatgtctccaagga 47 |||||||||||||||||| Sbjct: 134277 aaactatgtctccaagga 134260
>emb|CR974412.1| M.murinus DNA sequence from clone CH257-37C10, complete sequence Length = 250701 Score = 36.2 bits (18), Expect = 7.3 Identities = 18/18 (100%) Strand = Plus / Plus Query: 26 aggtaaactatgtctcca 43 |||||||||||||||||| Sbjct: 245037 aggtaaactatgtctcca 245054 Score = 36.2 bits (18), Expect = 7.3 Identities = 18/18 (100%) Strand = Plus / Minus Query: 26 aggtaaactatgtctcca 43 |||||||||||||||||| Sbjct: 130193 aggtaaactatgtctcca 130176
>emb|AL807245.17| Mouse DNA sequence from clone RP23-102B2 on chromosome 11, complete sequence Length = 114581 Score = 36.2 bits (18), Expect = 7.3 Identities = 18/18 (100%) Strand = Plus / Minus Query: 30 aaactatgtctccaagga 47 |||||||||||||||||| Sbjct: 6505 aaactatgtctccaagga 6488
>emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chromosome 16, complete sequence Length = 243114 Score = 36.2 bits (18), Expect = 7.3 Identities = 18/18 (100%) Strand = Plus / Plus Query: 30 aaactatgtctccaagga 47 |||||||||||||||||| Sbjct: 172569 aaactatgtctccaagga 172586 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 262,770 Number of Sequences: 3902068 Number of extensions: 262770 Number of successful extensions: 47551 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47543 Number of HSP's gapped (non-prelim): 8 length of query: 53 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 33 effective length of database: 17,155,003,908 effective search space: 566115128964 effective search space used: 566115128964 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)