>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC|
            2.7.11.1)
          Length = 901

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
 Frame = -3

Query: 422  LESIKKFSEIAEKCLADEGVNRPSMGEVLWHLESALQLQQGHPQSTNGDDCSDSQAQPSD 243
            LE++KK + +A KC+   G +RPSM +V   LE AL L  G P       C +    P++
Sbjct: 747  LEALKKIASVACKCVRMRGKDRPSMDKVTTALEHALALLMGSP-------CIEQPILPTE 799

Query: 242  VPIRIKEAEQSTRPGSHD--SDGQVVDVKIEVP*YRRP 135
            V +      + ++  S+   S+ ++ D + +   YR P
Sbjct: 800  VVLGSSRMHKVSQMSSNHSCSENELADGEDQGIGYRAP 837

>APK1B_ARATH (P46573) Protein kinase APK1B, chloroplast precursor (EC 2.7.11.1)|
          Length = 412

 Score = 35.0 bits (79), Expect = 0.082
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = -3

Query: 443 RLEGNYTLESIKKFSEIAEKCLADEGVNRPSMGEVLWHLESALQLQQ 303
           RL+  Y++E   K + +A +CL  E   RP+M EV+ HLE    L +
Sbjct: 313 RLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLEHIQTLNE 359

>APK1A_ARATH (Q06548) Protein kinase APK1A, chloroplast precursor (EC 2.7.11.1)|
          Length = 410

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -3

Query: 443 RLEGNYTLESIKKFSEIAEKCLADEGVNRPSMGEVLWHLE 324
           RL+  Y++E   K + ++ +CL  E   RP+M EV+ HLE
Sbjct: 312 RLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLE 351

>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)|
          Length = 389

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
 Frame = -3

Query: 443 RLEGNYTLESIKKFSEIAEKCLADEGVNRPSMGEVL-----WHLESALQLQQGHPQ 291
           RL+G Y+L    K + +A  C++ +  +RP+M E++      H++     +Q +PQ
Sbjct: 312 RLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEELHIQKEASKEQQNPQ 367

>HCC1_PONPY (Q5R4V4) Nuclear protein Hcc-1|
          Length = 209

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 21/103 (20%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
 Frame = -3

Query: 407 KFSEIAEKCLA----DEGVNRPSMGEVLWHLESALQLQQGHPQSTNGDDCSDSQAQPSDV 240
           K +E+ ++CLA     +G+ +  +  +  +LE   + ++ + +   GD+  + + +P ++
Sbjct: 11  KLAELKQECLARGLETKGIKQDLIHRLQAYLEEHAE-EEANEEDVLGDETEEEETKPIEL 69

Query: 239 PIRIKEAEQSTRPGSHDSDGQVVDVKIEVP*YRRPFEVSSKMN 111
           P  +KE E   +     ++ +VV +  E+P   R  + + + N
Sbjct: 70  P--VKEEEPPEKTVDVAAEKKVVKITSEIPQTERMQKRAERFN 110

>HCC1_HUMAN (P82979) Nuclear protein Hcc-1 (Proliferation-associated|
           cytokine-inducible protein CIP29)
          Length = 209

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 21/103 (20%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
 Frame = -3

Query: 407 KFSEIAEKCLA----DEGVNRPSMGEVLWHLESALQLQQGHPQSTNGDDCSDSQAQPSDV 240
           K +E+ ++CLA     +G+ +  +  +  +LE   + ++ + +   GD+  + + +P ++
Sbjct: 11  KLAELKQECLARGLETKGIKQDLIHRLQAYLEEHAE-EEANEEDVLGDETEEEETKPIEL 69

Query: 239 PIRIKEAEQSTRPGSHDSDGQVVDVKIEVP*YRRPFEVSSKMN 111
           P  +KE E   +     ++ +VV +  E+P   R  + + + N
Sbjct: 70  P--VKEEEPPEKTVDVAAEKKVVKITSEIPQTERMQKRAERFN 110

>HCC1_MOUSE (Q9D1J3) Nuclear protein Hcc-1|
          Length = 209

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 21/103 (20%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
 Frame = -3

Query: 407 KFSEIAEKCLA----DEGVNRPSMGEVLWHLESALQLQQGHPQSTNGDDCSDSQAQPSDV 240
           K +E+ ++CLA     +G+ +  +  +  +LE   + ++ + +   GD+  + + +P ++
Sbjct: 11  KLAELKQECLARGLETKGIKQDLINRLQAYLEDHAE-EEANEEDVLGDETEEEEPKPIEL 69

Query: 239 PIRIKEAEQSTRPGSHDSDGQVVDVKIEVP*YRRPFEVSSKMN 111
           P  +KE E   +     S+ +VV +   +P   R  + + + N
Sbjct: 70  P--VKEEEPPEKAVDMASEKKVVKITSGIPQTERMQKRAERFN 110

>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = -3

Query: 440 LEGNYTLESIKKFSEIAEKCLADEGVNRPSMGEVLWHLE 324
           L+GNY  E +++  ++A  C     + RP M EV+  LE
Sbjct: 526 LQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 564

>HCC1_RAT (Q498U4) Nuclear protein Hcc-1|
          Length = 209

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 21/103 (20%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
 Frame = -3

Query: 407 KFSEIAEKCLA----DEGVNRPSMGEVLWHLESALQLQQGHPQSTNGDDCSDSQAQPSDV 240
           K +E+ ++CLA     +G+ +  +  +  +LE   + ++ + +   GD+  + + +P ++
Sbjct: 11  KLAELKQECLARGLETKGIKQDLINRLQAYLEEHAE-EEANEEDVLGDETEEEEPKPIEL 69

Query: 239 PIRIKEAEQSTRPGSHDSDGQVVDVKIEVP*YRRPFEVSSKMN 111
           P  +KE E   +     S+ +VV +   +P   R  + + + N
Sbjct: 70  P--VKEEEPPEKVVDMASEKKVVKITSGIPQTERMQKRAERFN 110

>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does|
           not make infections protein 2) (Symbiosis receptor-like
           kinase) (MtSYMRK)
          Length = 925

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -3

Query: 440 LEGNYTLESIKKFSEIAEKCLADEGVNRPSMGEVLWHLESALQLQ 306
           ++G Y  E++ +  E+A +CL      RP M +++  LE AL ++
Sbjct: 831 IKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIE 875

>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)|
          Length = 924

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -3

Query: 440 LEGNYTLESIKKFSEIAEKCLADEGVNRPSMGEVLWHLESALQLQ 306
           ++G Y  E++ +  E+A +CL      RP M +++  LE AL ++
Sbjct: 830 IKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDALIIE 874

>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC|
           2.7.11.1)
          Length = 942

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -3

Query: 425 TLESIKKFSEIAEKCLADEGVNRPSMGEVLWHLESALQLQQGHPQSTNGDD 273
           TL S+   +E+A  C A E   RP MG  +  L S ++L +  P   N +D
Sbjct: 833 TLASVHTVAELAGHCCAREPYQRPDMGHAVNILSSLVELWK--PSDQNPED 881

>MMP17_HUMAN (Q9ULZ9) Matrix metalloproteinase-17 precursor (EC 3.4.24.-)|
           (MMP-17) (Membrane-type matrix metalloproteinase 4)
           (MT-MMP 4) (Membrane-type-4 matrix metalloproteinase)
           (MT4-MMP)
          Length = 606

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = -3

Query: 347 GEVLWH-LESALQLQQGHPQSTNGD--DCSDSQAQPSDVPIRIKEAE-QSTRPGSHD 189
           G+  W  L+  L++  G+PQST  D   C DSQA  S V   +  AE     PG HD
Sbjct: 498 GQEYWKVLDGELEVAPGYPQSTARDWLVCGDSQADGS-VAAGVDAAEGPRAPPGQHD 553

>DUT_HALSA (Q9HMF3) Probable deoxyuridine 5'-triphosphate nucleotidohydrolase|
           (EC 3.6.1.23) (dUTPase) (dUTP pyrophosphatase)
          Length = 165

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -3

Query: 269 SDSQAQPSDVPIRIKEAEQSTRPGSHDSDGQVV 171
           +D Q QP+ V + +    + T PG  D+DG+ +
Sbjct: 16  ADDQIQPNGVDLTVDAVLEQTEPGRIDTDGKTI 48

>SIRK_ARATH (O64483) Senescence-induced receptor-like serine/threonine-protein|
           kinase precursor (FLG22-induced receptor-like kinase 1)
          Length = 876

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -3

Query: 443 RLEGNYTLESIKKFSEIAEKCLADEGVNRPSMGEVLWHLE 324
           RL   Y + S  K SEIA  C       RP+M +V+  L+
Sbjct: 804 RLRERYDVGSAWKMSEIALACTEHTSAQRPTMSQVVMELK 843

>A36DE_DROME (Q9V3R1) Accessory gland protein Acp36DE precursor|
          Length = 912

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
 Frame = -3

Query: 422 LESIKKFSEIAEKCLADEGVNRPSM---------GEVLWHLESALQLQQGHPQSTNGDDC 270
           L  +KK +E+ +K LA++   RPS           ++L  L++ LQ QQ   +S   D  
Sbjct: 463 LLQLKKLTEVQQKQLAEQPTLRPSSKSQSPGQLEQQILLQLQNLLQFQQNQLKS---DTQ 519

Query: 269 SDSQAQPS 246
           + SQ Q S
Sbjct: 520 TQSQLQES 527

>SEB1_SCHPO (Q9UTE3) Rpb7-binding protein seb1|
          Length = 620

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
 Frame = -3

Query: 422 LESIKKFSEIAE-KCLADEGVNRPSMGEVLWHLESALQLQQGHP------QSTNGDDCSD 264
           LE++  F++ A     A+E V+ P    V   + + +     HP      QS +G+  S+
Sbjct: 198 LEALAAFAQKAPVPSAAEESVSTPPQPAVAPSVSAVVPNLPVHPATAINAQSQSGNPLSN 257

Query: 263 SQAQPSDVPIRIKEAEQSTRPGS-HDSDGQVV 171
              QPS+VP  I       + GS +D+  Q +
Sbjct: 258 PLFQPSNVPQSIPSGPMGMKTGSVNDTQSQQI 289

>RNFC_HAEIN (P71397) Electron transport complex protein rnfC|
          Length = 819

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +2

Query: 89  LLAGHPPYSFCLKLRKAFCIMAPQS*HQQLAHLNRESLDEWIAR 220
           +L  H P S  +K  K +    P    +   HL  + LD+WI R
Sbjct: 79  MLPVHAPTSGTIKSIKPYVATHPSGLDEPTIHLQADGLDQWIER 122

>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -3

Query: 269  SDSQAQPSDVPIRIKEAEQSTRPGSHDSDGQVVDVKIE 156
            ++ QAQP    I  +EAE+  +P S D +   V+V+ +
Sbjct: 2030 AEGQAQPESEVIESQEAEEEAQPESEDVEALEVEVETQ 2067


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,914,340
Number of Sequences: 219361
Number of extensions: 1337274
Number of successful extensions: 3422
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3422
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)