Clone Name | rbastl04g08 |
---|---|
Clone Library Name | barley_pub |
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 47.8 bits (112), Expect = 6e-06 Identities = 22/28 (78%), Positives = 24/28 (85%) Frame = -2 Query: 402 LASLDNTQTSIPTKPPGFADSFTSADGR 319 L SLDNTQ SIPT+P GFA+SFTS DGR Sbjct: 915 LPSLDNTQMSIPTRPYGFAESFTSVDGR 942
>WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)| (Protein kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1243 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 206 PCGGMPC*LSFDHVCIDVAFTLEIP 132 P GG+P L+ H+C+ AF L IP Sbjct: 604 PPGGVPSSLAESHLCLPSAFALSIP 628
>PHR_METTH (P12769) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA| photolyase) (Photoreactivating enzyme) Length = 445 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 6/80 (7%) Frame = +2 Query: 152 PHQYIHDQRRANMACHHK-----AKSSNIFKGR-EGGRGVEEAKGMNEQNDHLTGASDVA 313 P +Y + R A H A+ + G+ G + K + E DH A D+A Sbjct: 319 PREYEYSLRELESASTHDPYWNAAQQEMVITGKMHGYMRMYWGKKILEWTDHPARAYDIA 378 Query: 314 VYLPSAEVKESANPGGFVGM 373 +YL + +P GF G+ Sbjct: 379 LYLNDRYEIDGRDPNGFAGV 398
>CUBN_CANFA (Q9TU53) Cubilin precursor| Length = 3620 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +3 Query: 123 GLPGNF*SKGHINTYMIKGELTWHATTRP 209 G G+F S G+ NTY E W+ TT P Sbjct: 1394 GTTGSFSSPGYPNTYPPNKECIWYITTAP 1422
>MTH1_DROME (Q9VXD9) Probable G-protein coupled receptor Mth-like 1 precursor| (Protein methuselah-like 1) Length = 676 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Frame = +2 Query: 167 HDQRRANM---ACHH---KAKSSNIFKGREGGRGVEEAKGMNEQNDHLTGASDVAVYLPS 328 H QR + AC H A + I G GG +E+A G N Q LTG V++ S Sbjct: 286 HTQREGEVKIIACQHLFSSAAGAGIHDGSIGGT-IEQANGQNLQKAVLTGGILVSIVFLS 344 Query: 329 A 331 A Sbjct: 345 A 345
>AROC_BACHD (Q9KCB7) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 390 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%) Frame = +2 Query: 161 YIHDQRRANMACHHKAKSSNIFKGREGGRGVEEA-KGMNEQNDHLTGASDVAVYLPSAEV 337 ++H R+ + S N FKG E G G E A K +E +D + + Y Sbjct: 234 HVHYDRKLDAKIAAAVMSINAFKGVEFGIGFEAASKPGSEVHDEIAWDEERGYY------ 287 Query: 338 KESANPGGFVG 370 ++S N GGF G Sbjct: 288 RKSNNLGGFEG 298
>LSD1_DROME (Q9VCI3) Lipid storage droplets surface-binding protein 1| Length = 431 Score = 28.1 bits (61), Expect = 5.2 Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 19/102 (18%) Frame = +2 Query: 155 HQYIHDQRRANMACHHKAKSSNIFKGREGGRGVEEAKGMNEQNDH--------------- 289 ++ + D+R A A HH + S K R R + EA+ + +Q+ Sbjct: 204 NEAVPDERGAIKAIHHGQRFSRKLKRRLTQRTIAEARALKKQSKEAIHVLFYAAELIATD 263 Query: 290 ----LTGASDVAVYLPSAEVKESANPGGFVGMLVWVLSRLAR 403 + A ++ VYL + E + A P ++V + AR Sbjct: 264 PKQAVQKAKELWVYLSADEPENQARPATLEQLIVLLTRESAR 305
>Y1195_ZYMMO (Q5NN91) UPF0078 membrane protein ZMO1195| Length = 218 Score = 28.1 bits (61), Expect = 5.2 Identities = 15/57 (26%), Positives = 28/57 (49%) Frame = +2 Query: 221 IFKGREGGRGVEEAKGMNEQNDHLTGASDVAVYLPSAEVKESANPGGFVGMLVWVLS 391 ++ G GG+GV G++ + G +L SA++ ++ GG VG + +S Sbjct: 114 VWLGFRGGKGVATMLGVSFAAWWVAGVVFAVAWLLSAKISRYSSVGGMVGAIAATIS 170
>XRN1_SCHPO (P40383) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (Exonuclease 2)| (Exonuclease II) (Exo II) (p140) Length = 1328 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +2 Query: 152 PHQYIHDQR-RANMACHHKAKSSNIFKGREGGRGVE-EAKGMNEQNDHL 292 P IH + + + HH + +GR G RG +K +N ++DH+ Sbjct: 1270 PESLIHKSKSKFSKGNHHSTNGTQSIRGRGGKRGKPLRSKELNRKHDHI 1318
>GATA_COREF (Q8FPZ0) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)| (Glu-ADT subunit A) Length = 497 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +2 Query: 23 DQINVEYKPTNPKTIFYLGSKLT 91 +Q++V PT P T F LG K+T Sbjct: 412 EQVDVLVSPTTPSTAFKLGDKIT 434
>SPCS2_BRARE (Q5BJI9) Probable signal peptidase complex subunit 2 (EC 3.4.-.-)| (Microsomal signal peptidase 25 kDa subunit) (SPase 25 kDa subunit) Length = 201 Score = 24.6 bits (52), Expect(2) = 7.4 Identities = 13/39 (33%), Positives = 17/39 (43%) Frame = -1 Query: 208 GLVVACHVSSPLIMYVLMWPLL*KFPGSPRLTAWCCCYY 92 G + C VS + L+W L FP S + A C Y Sbjct: 58 GRLFICTVSCLFTIVALIWDYLHPFPESKPVLACCVVSY 96 Score = 21.6 bits (44), Expect(2) = 7.4 Identities = 9/26 (34%), Positives = 14/26 (53%) Frame = -2 Query: 396 SLDNTQTSIPTKPPGFADSFTSADGR 319 SLD+ + + G+ +SF DGR Sbjct: 34 SLDDAAKKVLIEKYGYLESFNLVDGR 59
>HEMO_RABIT (P20058) Hemopexin precursor| Length = 460 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +3 Query: 150 GHINTYMIKGELTWHATTRPNPATFLKA 233 GH + Y+IKG+ W T+ N + K+ Sbjct: 106 GHTSVYLIKGDKVWVYTSEKNEKVYPKS 133
>PAT1_YEAST (P25644) Topoisomerase II-associated protein PAT1| Length = 796 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Frame = -3 Query: 392 WIT-PRPASRRSLQGLPIPSPLPMEDRPLRPKLRSDD 285 W T P PA S Q P+P P + PL+P L D Sbjct: 110 WSTAPPPAMAPSPQSTMAPAPAPQQMAPLQPILSMQD 146 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,736,243 Number of Sequences: 219361 Number of extensions: 962521 Number of successful extensions: 2976 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2880 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2973 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)