ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl04g07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133P17, full insert sequence Length = 3521 Score = 214 bits (108), Expect = 2e-52 Identities = 147/160 (91%) Strand = Plus / Minus Query: 248 ctaagtaaagctggatgagcctaacattaactcaaacatgtcatctggggtgagaagggt 307 |||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 2804 ctaactaaagctggatgagcccaacatcaactcaaacatgtcatctggggtaagaagggt 2745 Query: 308 tgtaccaccaagaatgagctgcacatcaggtctgccgctctctgagattgccttcatgac 367 ||| || |||||||| |||| |||||||||||||| ||| ||||| |||||||||||||| Sbjct: 2744 tgttcccccaagaataagctccacatcaggtctgctgctgtctgatattgccttcatgac 2685 Query: 368 ttcccggacctcaagagtattgatgcctcccacaacaaaa 407 ||||||||||||||| | |||||||||||||||||||||| Sbjct: 2684 ttcccggacctcaagggcattgatgcctcccacaacaaaa 2645
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 172 bits (87), Expect = 6e-40 Identities = 120/131 (91%) Strand = Plus / Plus Query: 248 ctaagtaaagctggatgagcctaacattaactcaaacatgtcatctggggtgagaagggt 307 |||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 95649 ctaactaaagctggatgagcccaacatcaactcaaacatgtcatctggggtaagaagggt 95708 Query: 308 tgtaccaccaagaatgagctgcacatcaggtctgccgctctctgagattgccttcatgac 367 ||| || |||||||| |||| |||||||||||||| ||| ||||| |||||||||||||| Sbjct: 95709 tgttcccccaagaataagctccacatcaggtctgctgctgtctgatattgccttcatgac 95768 Query: 368 ttcccggacct 378 ||||||||||| Sbjct: 95769 ttcccggacct 95779 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 375 acctcaagagtattgatgcctcccacaacaaaa 407 |||||||| | |||||||||||||||||||||| Sbjct: 96719 acctcaagggcattgatgcctcccacaacaaaa 96751
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 172 bits (87), Expect = 6e-40 Identities = 120/131 (91%) Strand = Plus / Minus Query: 248 ctaagtaaagctggatgagcctaacattaactcaaacatgtcatctggggtgagaagggt 307 |||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 3318645 ctaactaaagctggatgagcccaacatcaactcaaacatgtcatctggggtaagaagggt 3318586 Query: 308 tgtaccaccaagaatgagctgcacatcaggtctgccgctctctgagattgccttcatgac 367 ||| || |||||||| |||| |||||||||||||| ||| ||||| |||||||||||||| Sbjct: 3318585 tgttcccccaagaataagctccacatcaggtctgctgctgtctgatattgccttcatgac 3318526 Query: 368 ttcccggacct 378 ||||||||||| Sbjct: 3318525 ttcccggacct 3318515 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 375 acctcaagagtattgatgcctcccacaacaaaa 407 |||||||| | |||||||||||||||||||||| Sbjct: 3317575 acctcaagggcattgatgcctcccacaacaaaa 3317543
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 172 bits (87), Expect = 6e-40 Identities = 120/131 (91%) Strand = Plus / Minus Query: 248 ctaagtaaagctggatgagcctaacattaactcaaacatgtcatctggggtgagaagggt 307 |||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 3327350 ctaactaaagctggatgagcccaacatcaactcaaacatgtcatctggggtaagaagggt 3327291 Query: 308 tgtaccaccaagaatgagctgcacatcaggtctgccgctctctgagattgccttcatgac 367 ||| || |||||||| |||| |||||||||||||| ||| ||||| |||||||||||||| Sbjct: 3327290 tgttcccccaagaataagctccacatcaggtctgctgctgtctgatattgccttcatgac 3327231 Query: 368 ttcccggacct 378 ||||||||||| Sbjct: 3327230 ttcccggacct 3327220 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 375 acctcaagagtattgatgcctcccacaacaaaa 407 |||||||| | |||||||||||||||||||||| Sbjct: 3326280 acctcaagggcattgatgcctcccacaacaaaa 3326248
>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region: complement C4 (C4) and cytochrome P450 hydroxylase A (CYP21OH-A) genes, complete cds; slp pseudogene, complete sequence; NG6, SKI, and complement factor B (Bf) genes, complete cds; and complement factor C2 (C2) gene, partial cds Length = 149886 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 145 aaatcccatctcaaaagcaaaac 167 ||||||||||||||||||||||| Sbjct: 17754 aaatcccatctcaaaagcaaaac 17776
>gb|M17440.1|MUSMHC4H2S Mus musculus complement component C4A (C4A) gene, complete cds Length = 17522 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 145 aaatcccatctcaaaagcaaaac 167 ||||||||||||||||||||||| Sbjct: 2078 aaatcccatctcaaaagcaaaac 2056
>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete sequence Length = 111957 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 145 aaatcccatctcaaaagcaaaac 167 ||||||||||||||||||||||| Sbjct: 81233 aaatcccatctcaaaagcaaaac 81255
>gb|M64933.1|MUSSLPSEXB Mouse nonfunctional sex-limited protein, and cytochrome P-450 (Cyp21) genes, complete cds Length = 26307 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 145 aaatcccatctcaaaagcaaaac 167 ||||||||||||||||||||||| Sbjct: 4592 aaatcccatctcaaaagcaaaac 4570
>gb|M12968.1|MUSMHC4A1 Mouse MHC class III H2-C4 complement component gene, exons 1, 2, and 3 Length = 954 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 145 aaatcccatctcaaaagcaaaac 167 ||||||||||||||||||||||| Sbjct: 592 aaatcccatctcaaaagcaaaac 570
>dbj|D90170.1|MUSC4SLP3 Mus musculus C4/Slp hybrid 3 gene, partial cds Length = 4715 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 145 aaatcccatctcaaaagcaaaac 167 ||||||||||||||||||||||| Sbjct: 1185 aaatcccatctcaaaagcaaaac 1163
>dbj|D90169.1|MUSC4SLP2 Mus musculus C4/Slp hybrid 2 gene, partial cds Length = 4739 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 145 aaatcccatctcaaaagcaaaac 167 ||||||||||||||||||||||| Sbjct: 1191 aaatcccatctcaaaagcaaaac 1169
>dbj|D90168.1|MUSC4SLP1 Mus musculus C4/Slp hybrid 1 gene, partial cds Length = 4718 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 145 aaatcccatctcaaaagcaaaac 167 ||||||||||||||||||||||| Sbjct: 1165 aaatcccatctcaaaagcaaaac 1143
>dbj|D90167.1|MUSC4 Mus musculus C4 gene, partial cds Length = 4685 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 145 aaatcccatctcaaaagcaaaac 167 ||||||||||||||||||||||| Sbjct: 1185 aaatcccatctcaaaagcaaaac 1163
>gb|AC151408.1| Pan troglodytes chromosome X clone PTB-007P20 map human ortholog q23, complete sequence Length = 68318 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 caaaacaatgtacagattaaat 183 |||||||||||||||||||||| Sbjct: 27525 caaaacaatgtacagattaaat 27546
>gb|AC006374.2| Homo sapiens BAC clone RP11-357D2 from 7, complete sequence Length = 160626 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 168 aatgtacagattaaatttacat 189 |||||||||||||||||||||| Sbjct: 41544 aatgtacagattaaatttacat 41523
>gb|AC164957.2| Mus musculus BAC clone RP23-480L9 from chromosome 17, complete sequence Length = 183439 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 aacaatgtacagattaaattta 186 |||||||||||||||||||||| Sbjct: 47295 aacaatgtacagattaaattta 47316
>emb|AL031117.1|HS914P14 Human DNA sequence from clone RP5-914P14 on chromosome Xq23 Contains the 3' end of the PAK3 gene for p21 (CDKN1A)-activated kinase 3, the CAPN6 gene for calpain 6, a glutamate dehydrogenase 1 (GLUD1) pseudogene and the 3' end of the DCX gene for doublecortex; lissencephaly, X-linked (doublecortin), complete sequence Length = 155375 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 162 caaaacaatgtacagattaaat 183 |||||||||||||||||||||| Sbjct: 103409 caaaacaatgtacagattaaat 103430
>emb|AL645972.10| Mouse DNA sequence from clone RP23-274J5 on chromosome 11, complete sequence Length = 192586 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 144 aaaatcccatctcaaaagcaaaacaa 169 |||| ||||||||||||||||||||| Sbjct: 97388 aaaaccccatctcaaaagcaaaacaa 97413
>gb|AC123650.7| Mus musculus chromosome 1, clone RP23-124N16, complete sequence Length = 220806 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 145 aaatcccatctcaaaagcaaaacaa 169 |||||||||||||||| |||||||| Sbjct: 77839 aaatcccatctcaaaaacaaaacaa 77815
>gb|AC121606.3| Mus musculus BAC clone RP23-314H5 from chromosome 1, complete sequence Length = 200095 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 aaatcccatctcaaaagcaaaacaa 169 |||||||||||||||| |||||||| Sbjct: 64316 aaatcccatctcaaaaacaaaacaa 64340
>emb|AL606467.5| Human DNA sequence from clone RP13-172P16 on chromosome Xp21.1-21.3 Contains a High mobility group protein 1 (HMG-1)(LOC340573) pseudogene, a novel gene and the 5'end of a novel gene (LOC158730), complete sequence Length = 138093 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 ccaaaggtatagtctaaatac 24 ||||||||||||||||||||| Sbjct: 22518 ccaaaggtatagtctaaatac 22538
>emb|AL591146.21| Mouse DNA sequence from clone RP23-252E4 on chromosome 11 Contains the 3' end of the Myo1d gene for myosin ID, two novel genes, the Cdk5r gene for cyclin-dependent kinase 5 regulatory subunit (p35), the Psmd11 gene for non-ATPase proteasome (prosome, macropain) 26S subunit 11, the Zfp207 gene for zinc finger protein 207 and the 3' end of the Rhbdl4 gene for rhomboid veinlet-like 4 (Drosophila), complete sequence Length = 195208 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 cccatctcaaaagcaaaacaa 169 ||||||||||||||||||||| Sbjct: 40832 cccatctcaaaagcaaaacaa 40812
>gb|AC011511.12| Homo sapiens chromosome 19 clone CTD-2369P2, complete sequence Length = 156503 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 cccatctcaaaagcaaaacaa 169 ||||||||||||||||||||| Sbjct: 26841 cccatctcaaaagcaaaacaa 26821
>gb|AC117401.3| Homo sapiens 3 BAC RP11-521J5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 197360 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 145 aaatcccatctcaaaagcaaaacaa 169 |||||| |||||||||||||||||| Sbjct: 47683 aaatcctatctcaaaagcaaaacaa 47707
>gb|AC087373.4| Homo sapiens chromosome 11, clone RP11-54J7, complete sequence Length = 200604 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 caaaacaatgtacagattaaa 182 ||||||||||||||||||||| Sbjct: 62585 caaaacaatgtacagattaaa 62605
>emb|CT485603.4| RP43-005L22, complete sequence Length = 204041 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 ccaaaggtatagtctaaatac 24 ||||||||||||||||||||| Sbjct: 22785 ccaaaggtatagtctaaatac 22805
>emb|AL627184.18| Mouse DNA sequence from clone RP23-125F21 on chromosome 4, complete sequence Length = 152069 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 cccatctcaaaagcaaaacaa 169 ||||||||||||||||||||| Sbjct: 46762 cccatctcaaaagcaaaacaa 46742
>gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, complete sequence Length = 203580 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 taaatactgggctgaagggg 37 |||||||||||||||||||| Sbjct: 29660 taaatactgggctgaagggg 29679
>gb|AC120002.24| Mus musculus chromosome 12, clone RP24-147D14, complete sequence Length = 179305 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 aaaaatcccatctcaaaagcaaaa 166 |||||||||||||||||| ||||| Sbjct: 80071 aaaaatcccatctcaaaaacaaaa 80048
>gb|AC134561.5| Mus musculus BAC clone RP24-111C16 from chromosome 8, complete sequence Length = 179978 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 aaaaatcccatctcaaaagc 162 |||||||||||||||||||| Sbjct: 124731 aaaaatcccatctcaaaagc 124712
>gb|AC185995.2| Pan troglodytes BAC clone CH251-277I3 from chromosome 2, complete sequence Length = 161457 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 attaatgtctaagtaaagct 259 |||||||||||||||||||| Sbjct: 73115 attaatgtctaagtaaagct 73096
>gb|AC146244.3| Pan troglodytes BAC clone RP43-27M14 from 7, complete sequence Length = 161963 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 116221 ccatctcaaaagcaaaacaa 116202
>gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, complete sequence Length = 176607 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 aaaacaatgtacagattaaattta 186 ||||||||||||||||| |||||| Sbjct: 153857 aaaacaatgtacagattcaattta 153880
>gb|AC122820.4| Mus musculus BAC clone RP23-200M5 from chromosome 6, complete sequence Length = 215238 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 190431 ccatctcaaaagcaaaacaa 190450
>gb|AC074257.5| Homo sapiens BAC clone RP11-796I2 from 7, complete sequence Length = 186047 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 158682 ccatctcaaaagcaaaacaa 158663
>gb|BC064899.1| Homo sapiens cDNA clone IMAGE:6008187, partial cds Length = 1202 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 519 ccatctcaaaagcaaaacaa 500
>gb|AY363102.1|AY363102S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 1 and 2 Length = 309506 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 233446 ccatctcaaaagcaaaacaa 233465
>gb|AC127681.4| Mus musculus BAC clone RP24-164P24 from chromosome 3, complete sequence Length = 175131 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 taaatactgggctgaagggg 37 |||||||||||||||||||| Sbjct: 141126 taaatactgggctgaagggg 141145
>gb|AC122901.4| Mus musculus BAC clone RP23-40D21 from chromosome 10, complete sequence Length = 207598 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 aaaaatcccatctcaaaagcaaaa 166 ||||||||||||||||||| |||| Sbjct: 170197 aaaaatcccatctcaaaagaaaaa 170174
>emb|BX088589.14| Zebrafish DNA sequence from clone DKEY-27E7 in linkage group 12, complete sequence Length = 242558 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 catctcaaaagcaaaacaat 170 |||||||||||||||||||| Sbjct: 218100 catctcaaaagcaaaacaat 218119
>gb|AC122795.3| Mus musculus BAC clone RP24-226D9 from chromosome 6, complete sequence Length = 146405 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 tatgtctaattaatgtctaa 251 |||||||||||||||||||| Sbjct: 94213 tatgtctaattaatgtctaa 94194
>gb|AC123795.4| Mus musculus BAC clone RP24-317K11 from chromosome 5, complete sequence Length = 188616 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 aaaaatcccatctcaaaagc 162 |||||||||||||||||||| Sbjct: 118011 aaaaatcccatctcaaaagc 117992
>emb|CR381602.30| Zebrafish DNA sequence from clone DKEY-183M22 in linkage group 6, complete sequence Length = 192136 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 agattaaatttacatgattg 194 |||||||||||||||||||| Sbjct: 14915 agattaaatttacatgattg 14934
>emb|CR769775.11| Human DNA sequence from clone RP11-449H15 on chromosome 9 Contains a novel gene, complete sequence Length = 169430 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 gacaagcagtacctggaagcaaga 228 |||||||||||| ||||||||||| Sbjct: 167906 gacaagcagtacatggaagcaaga 167883
>emb|BX323046.3| Human DNA sequence from clone RP11-11N7 on chromosome 1 Contains the FAM36A gene for member A of family with sequence similarity 36, the gene for a novel protein (FLJ37978, FLJ30202), the HNRPU gene for heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) and three CpG islands, complete sequence Length = 124570 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 116844 ccatctcaaaagcaaaacaa 116863
>emb|BX664730.2| Human DNA sequence from clone RP11-118H15 on chromosome 9 Contains a novel gene, complete sequence Length = 171251 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 gacaagcagtacctggaagcaaga 228 |||||||||||| ||||||||||| Sbjct: 74002 gacaagcagtacatggaagcaaga 73979
>emb|AL845311.9| Human DNA sequence from clone RP11-402N8 on chromosome 9 Contains a novel gene and a CpG island, complete sequence Length = 148407 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 gacaagcagtacctggaagcaaga 228 |||||||||||| ||||||||||| Sbjct: 143428 gacaagcagtacatggaagcaaga 143405
>emb|AL592148.7| Human DNA sequence from clone RP11-378J18 on chromosome 1 Contains the gene for a novel protein (FLJ13840), the TAF1A gene for TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa, two novel genes, the gene for C219-reactive peptide (FLJ39207), the 3' of the gene for a novel protein (FLJ12806) and a CpG island, complete sequence Length = 194034 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 ctcaaaagcaaaacaatgta 173 |||||||||||||||||||| Sbjct: 180215 ctcaaaagcaaaacaatgta 180234
>emb|AL590138.7| Human DNA sequence from clone RP11-243A2 on chromosome 1 Contains part of the PLXNA2 gene for plexin A2, complete sequence Length = 164057 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 149572 ccatctcaaaagcaaaacaa 149553
>emb|AL354874.14| Human DNA sequence from clone RP11-38P6 on chromosome 9 Contains a novel gene, complete sequence Length = 88826 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gacaagcagtacctggaagcaaga 228 |||||||||||| ||||||||||| Sbjct: 27333 gacaagcagtacatggaagcaaga 27356
>emb|AL353791.7| Human DNA sequence from clone RP11-475B17 on chromosome 9 Contains the 3' end of novel protein similar to contactin associated protein-like 3 (CNTNAP3) and a pseudogene similar to part of vomeronasal 2 family, complete sequence Length = 208233 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gacaagcagtacctggaagcaaga 228 |||||||||||| ||||||||||| Sbjct: 189865 gacaagcagtacatggaagcaaga 189888
>emb|AL161936.15| Human DNA sequence from clone RP11-48B24 on chromosome 10 Contains the 3' end of the WAC gene for WW domain-containing adapter with a coiled-coil region (PRO1741, FLJ31290, KIAA1844, MGC10753), a CGI-121 protein (CGI-121) pseudogene, the NMA gene for novel protein and two CpG islands, complete sequence Length = 155584 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 100816 ccatctcaaaagcaaaacaa 100797
>emb|AL009031.1|HS467D16 Human DNA sequence from clone RP3-467D16 on chromosome 6p22.3-24.1 Contains the 5' end of the SCA1 gene for spinocerebellar ataxia 1 (olivopontocerebellar ataxia 1, autosomal dominant, ataxin 1) with a poly-glutamine (CAG repeat) polymorphism and the 3' part of the GMPR gene for GMP reductase, Guanosine 5'-monophosphate oxidoreductase, complete sequence Length = 143583 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 127675 ccatctcaaaagcaaaacaa 127656
>emb|CR735103.4| Zebrafish DNA sequence from clone CH211-13L14 in linkage group 12, complete sequence Length = 126042 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 catctcaaaagcaaaacaat 170 |||||||||||||||||||| Sbjct: 71543 catctcaaaagcaaaacaat 71524
>gb|AC120042.3| Homo sapiens chromosome 8, clone RP11-659E9, complete sequence Length = 170940 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 actgggctgaaggggtggcaggga 46 |||||||||||||||||| ||||| Sbjct: 83762 actgggctgaaggggtgggaggga 83739
>gb|AC110048.2| Homo sapiens chromosome 15, clone RP11-622C24, complete sequence Length = 163592 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 48604 ccatctcaaaagcaaaacaa 48623
>gb|AC019357.7| Homo sapiens chromosome 8, clone RP11-687A13, complete sequence Length = 181694 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 actgggctgaaggggtggcaggga 46 |||||||||||||||||| ||||| Sbjct: 136974 actgggctgaaggggtgggaggga 136951
>gb|AC011453.4| Homo sapiens chromosome 19 clone CTC-339O9, complete sequence Length = 128736 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 16795 ccatctcaaaagcaaaacaa 16814
>gb|AC008761.8| Homo sapiens chromosome 19 clone CTD-3149D2, complete sequence Length = 226170 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 acctggaagcaagaatctat 234 |||||||||||||||||||| Sbjct: 224322 acctggaagcaagaatctat 224303
>emb|CR626925.1| Human DNA sequence from clone XX-NCIH2171_3N23, complete sequence Length = 122867 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 gcaatgtgggtggaaattat 92 |||||||||||||||||||| Sbjct: 69550 gcaatgtgggtggaaattat 69569
>emb|CR626893.1| Human DNA sequence from clone XX-NCIH2171_14M18, complete sequence Length = 113428 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gcaatgtgggtggaaattat 92 |||||||||||||||||||| Sbjct: 44353 gcaatgtgggtggaaattat 44334
>dbj|AK125214.1| Homo sapiens cDNA FLJ43224 fis, clone HCASM2001285 Length = 2204 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 423 ccatctcaaaagcaaaacaa 404
>gb|AF334829.1| Homo sapiens mitochondrial RNA-processing endoribonuclease RNA (RMRP) gene, complete sequence Length = 187856 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 aatgtctaagtaaagctgga 262 |||||||||||||||||||| Sbjct: 61226 aatgtctaagtaaagctgga 61207
>gb|AC073576.23| Homo sapiens 12 BAC RP11-363M20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180309 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 65133 ccatctcaaaagcaaaacaa 65152
>gb|AC109494.3| Homo sapiens chromosome 5 clone RP11-783J1, complete sequence Length = 172180 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 tgtgacttaacaattctctaagcc 131 ||||||||||| |||||||||||| Sbjct: 125612 tgtgacttaactattctctaagcc 125635
>gb|AC087533.7| Homo sapiens, clone RP11-89A4, complete sequence Length = 154179 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 113552 ccatctcaaaagcaaaacaa 113533
>gb|AC069262.24| Homo sapiens 12 BAC RP11-753B7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190723 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 127351 ccatctcaaaagcaaaacaa 127370
>gb|AC019227.4| Homo sapiens BAC clone RP11-567O18 from 11, complete sequence Length = 190314 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 148011 ccatctcaaaagcaaaacaa 147992
>gb|AC079920.6| Homo sapiens BAC clone RP11-325K1 from 7, complete sequence Length = 130284 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 102455 ccatctcaaaagcaaaacaa 102474
>gb|AC093334.4| Homo sapiens chromosome 15, clone RP11-798K3, complete sequence Length = 220807 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 163560 ccatctcaaaagcaaaacaa 163579
>gb|AC090461.4| Homo sapiens chromosome 15, clone RP11-100A11, complete sequence Length = 167218 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 48779 ccatctcaaaagcaaaacaa 48798
>gb|AC007318.4| Homo sapiens BAC clone RP11-420C9 from 2, complete sequence Length = 204230 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 206 ccatctcaaaagcaaaacaa 187
>gb|AC154878.7| Mus musculus chromosome 7, clone RP23-250P5, complete sequence Length = 180302 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 aaaacaatgtacagattaaattta 186 ||||||||||||||||| |||||| Sbjct: 114439 aaaacaatgtacagattcaattta 114416
>gb|AC020688.7| Homo sapiens chromosome 8, clone RP11-255B23, complete sequence Length = 198958 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 gcaatgtgggtggaaattat 92 |||||||||||||||||||| Sbjct: 131485 gcaatgtgggtggaaattat 131466
>gb|AC008842.6| Homo sapiens chromosome 5 clone CTD-2155H8, complete sequence Length = 125238 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 tgtgacttaacaattctctaagcc 131 ||||||||||| |||||||||||| Sbjct: 8130 tgtgacttaactattctctaagcc 8153
>gb|AC154708.3| Mus musculus BAC clone RP24-355K5 from chromosome 14, complete sequence Length = 180538 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 149510 ccatctcaaaagcaaaacaa 149529
>gb|AC148684.1| Macaca mulatta Major Histocompatibility Complex BAC MMU179H14, complete sequence Length = 165072 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 156961 ccatctcaaaagcaaaacaa 156980
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 acaacattgtgacttaacaa 120 |||||||||||||||||||| Sbjct: 27331348 acaacattgtgacttaacaa 27331329
>gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complete sequence Length = 233117 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 attaatgtctaagtaaagct 259 |||||||||||||||||||| Sbjct: 64379 attaatgtctaagtaaagct 64360
>gb|AC008753.9| Homo sapiens chromosome 19 clone CTD-3022G6, complete sequence Length = 147330 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 17597 ccatctcaaaagcaaaacaa 17578
>gb|AC084278.6| Homo sapiens BAC clone RP11-350H15 from 2, complete sequence Length = 3994 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 2200 ccatctcaaaagcaaaacaa 2181
>gb|AC012074.9| Homo sapiens BAC clone RP11-458N5 from 2, complete sequence Length = 197652 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 132895 ccatctcaaaagcaaaacaa 132876
>gb|AC125435.8| Homo sapiens chromosome 15, clone CTD-2235H24, complete sequence Length = 124255 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 7241 ccatctcaaaagcaaaacaa 7260
>gb|AC106803.3| Homo sapiens chromosome 5 clone RP11-478A7, complete sequence Length = 169122 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 142 caaaaatcccatctcaaaagcaaaacaa 169 |||||||||||||||| || |||||||| Sbjct: 30221 caaaaatcccatctcagaaacaaaacaa 30248
>gb|AC010165.10|AC010165 Homo sapiens chromosome 5 clone RP11-17J3, complete sequence Length = 168909 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 tgtgacttaacaattctctaagcc 131 ||||||||||| |||||||||||| Sbjct: 104688 tgtgacttaactattctctaagcc 104665
>gb|AC022404.7|AC022404 Homo sapiens chromosome 14 clone CTD-2308C24 and RP11-757H14 map 14q31, complete sequence Length = 232309 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 tacagattaaatttacatga 191 |||||||||||||||||||| Sbjct: 80681 tacagattaaatttacatga 80662
>gb|AC007379.2|AC007379 Homo sapiens BAC clone RP11-143C1 from Y, complete sequence Length = 174082 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 7434 ccatctcaaaagcaaaacaa 7415
>gb|AC022966.13| Homo sapiens chromosome 17, clone RP11-323N12, complete sequence Length = 184139 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 156538 ccatctcaaaagcaaaacaa 156519
>gb|AC007240.2| Homo sapiens BAC clone RP11-83M8 from 2, complete sequence Length = 203250 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 98997 ccatctcaaaagcaaaacaa 99016
>gb|AC019014.1|AC019014 Homo sapiens clone RP11-221G19 from 7q31, complete sequence Length = 155656 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 aatcccatctcaaaagcaaaacaa 169 ||||||||||||||| |||||||| Sbjct: 79667 aatcccatctcaaaaacaaaacaa 79644
>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E08 Length = 144219 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 acaacattgtgacttaacaa 120 |||||||||||||||||||| Sbjct: 14243 acaacattgtgacttaacaa 14224
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 acaacattgtgacttaacaa 120 |||||||||||||||||||| Sbjct: 111865 acaacattgtgacttaacaa 111846
>gb|AC022333.11|AC022333 Homo sapiens chr3 BAC RP11-64O13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173907 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 147303 ccatctcaaaagcaaaacaa 147322
>gb|AC116493.10| Homo sapiens chromosome 17, clone CTD-3147F3, complete sequence Length = 94420 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 47799 ccatctcaaaagcaaaacaa 47818
>ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5 (P4-P5@) on chromosome Y Length = 1351786 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 1160435 ccatctcaaaagcaaaacaa 1160416
>gb|AY919043.1| Homo sapiens truncated REV1-like (yeast) (REV1L) gene, complete cds Length = 93047 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 attaatgtctaagtaaagct 259 |||||||||||||||||||| Sbjct: 57462 attaatgtctaagtaaagct 57481
>gb|AC122205.6| Mus musculus BAC clone RP23-76C13 from chromosome 8, complete sequence Length = 249808 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 188754 ccatctcaaaagcaaaacaa 188735
>emb|AL096870.5|CNS00YVI Human chromosome 14 DNA sequence BAC R-934B9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196533 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 161569 ccatctcaaaagcaaaacaa 161550
>dbj|AP002813.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-856M9, complete sequence Length = 187516 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 142595 ccatctcaaaagcaaaacaa 142576
>dbj|AP003503.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-86D13, complete sequence Length = 175454 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 100308 ccatctcaaaagcaaaacaa 100289
>emb|AL133410.32| Human DNA sequence from clone RP11-112J3 on chromosome 9p13.1-13.3 Contains the 3' end of the CA9 gene for carbonic anhydrase IX (MN), the TPM2 gene for tropomyosin 2 (beta) (DA1, TMSB, AMCD1), the TLN1 gene for talin 1 (TLN, KIAA1027), the CREB3 gene for cAMP responsive element binding protein 3 (luman) (LZIP, LUMAN, MGC15333, MGC19782), the GBA2 gene for glucosidase, beta (bile acid) 2 (AD035, KIAA1605, MGC16895, DKFZp762K054), a novel gene (KIAA0258), five novel genes, the NPR2 gene for natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B) (NPRB, ANPRB, GUC2B, NPRBi), the SPAG8 gene for sperm associated antigen 8 (SMP1, BS-84, HSD-1, hSMP-1, MGC26201), the HINT2 gene for Histidine triad nucleotide binding protein 2, the gene for NAG-5 protein (LOC51754), an olfactory receptor pseudogene, the gene for a novel seven transmembrane helix receptor, a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5,13kDa (B13, NUFM, UQOR13, FLJ12147, CI-13KD-B) (NDUFA5) pseudogene and six CpG islands, complete sequence Length = 195379 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 aatgtctaagtaaagctgga 262 |||||||||||||||||||| Sbjct: 50110 aatgtctaagtaaagctgga 50129
>emb|AL954850.12| Mouse DNA sequence from clone RP23-331B22 on chromosome X, complete sequence Length = 146713 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 12109 ccatctcaaaagcaaaacaa 12128
>gb|AC002326.1|AC002326 Genomic sequence from Human 6, complete sequence Length = 148750 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 137929 ccatctcaaaagcaaaacaa 137910
>gb|AC005952.2| Homo sapiens chromosome 19, cosmid F19847, complete sequence Length = 15976 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 acctggaagcaagaatctat 234 |||||||||||||||||||| Sbjct: 6750 acctggaagcaagaatctat 6731
>emb|AL845364.4| Mouse DNA sequence from clone RP23-301M3 on chromosome 4, complete sequence Length = 205273 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 196952 ccatctcaaaagcaaaacaa 196971
>emb|AL808015.4| Mouse DNA sequence from clone RP23-467C11 on chromosome X, complete sequence Length = 180935 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 taacattaactcaaacatgt 288 |||||||||||||||||||| Sbjct: 77876 taacattaactcaaacatgt 77857
>emb|AL591855.11| Human DNA sequence from clone RP11-4C12 on chromosome 9, complete sequence Length = 153214 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gacaagcagtacctggaagcaaga 228 |||||||||||| ||||||||||| Sbjct: 91696 gacaagcagtacatggaagcaaga 91719
>emb|AL732500.7| Mouse DNA sequence from clone RP23-208J6 on chromosome 4, complete sequence Length = 178699 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 144 aaaatcccatctcaaaagcaaaacaatgtaca 175 |||||| | |||||||| |||||||||||||| Sbjct: 70617 aaaatcacgtctcaaaaacaaaacaatgtaca 70648
>gb|AC015720.20| Homo sapiens chromosome 15, clone RP11-151H2, complete sequence Length = 174559 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 18805 ccatctcaaaagcaaaacaa 18786
>dbj|AP002366.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-142N13, complete sequence Length = 198720 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ccatctcaaaagcaaaacaa 169 |||||||||||||||||||| Sbjct: 8277 ccatctcaaaagcaaaacaa 8258 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,097,759 Number of Sequences: 3902068 Number of extensions: 4097759 Number of successful extensions: 100196 Number of sequences better than 10.0: 110 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99908 Number of HSP's gapped (non-prelim): 288 length of query: 407 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 385 effective length of database: 17,147,199,772 effective search space: 6601671912220 effective search space used: 6601671912220 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
