>ref|XM_470443.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2995

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                        
Query: 164  gcttctctgatttggaaggtcttcaaaatatttctagccttatcatactcgttcagcgcc 223
            ||||||||||| || || ||||||||||||  |||||| |||||||| || |||||  | 
Sbjct: 2861 gcttctctgatctgaaaagtcttcaaaatagctctagctttatcatattcattcagttct 2802

                                                
Query: 224  accaatatgttctccaaacgacgcgccagcccacgt 259
            ||||||||||  | ||||||||| ||||||||||||
Sbjct: 2801 accaatatgtctttcaaacgacgagccagcccacgt 2766

>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08
             map S15179S, complete sequence
          Length = 166005

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                         
Query: 164   gcttctctgatttggaaggtcttcaaaatatttctagccttatcatactcgttcagcgcc 223
             ||||||||||| || || ||||||||||||  |||||| |||||||| || |||||  | 
Sbjct: 59202 gcttctctgatctgaaaagtcttcaaaatagctctagctttatcatattcattcagttct 59261

                                                 
Query: 224   accaatatgttctccaaacgacgcgccagcccacgt 259
             ||||||||||  | ||||||||| ||||||||||||
Sbjct: 59262 accaatatgtctttcaaacgacgagccagcccacgt 59297

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                            
Query: 164      gcttctctgatttggaaggtcttcaaaatatttctagccttatcatactcgttcagcgcc 223
                ||||||||||| || || ||||||||||||  |||||| |||||||| || |||||  | 
Sbjct: 35661424 gcttctctgatctgaaaagtcttcaaaatagctctagctttatcatattcattcagttct 35661483

                                                    
Query: 224      accaatatgttctccaaacgacgcgccagcccacgt 259
                ||||||||||  | ||||||||| ||||||||||||
Sbjct: 35661484 accaatatgtctttcaaacgacgagccagcccacgt 35661519

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                            
Query: 164      gcttctctgatttggaaggtcttcaaaatatttctagccttatcatactcgttcagcgcc 223
                ||||||||||| || || ||||||||||||  |||||| |||||||| || |||||  | 
Sbjct: 35751497 gcttctctgatctgaaaagtcttcaaaatagctctagctttatcatattcattcagttct 35751556

                                                    
Query: 224      accaatatgttctccaaacgacgcgccagcccacgt 259
                ||||||||||  | ||||||||| ||||||||||||
Sbjct: 35751557 accaatatgtctttcaaacgacgagccagcccacgt 35751592

>dbj|AK069032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004O11, full
            insert sequence
          Length = 3216

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                        
Query: 164  gcttctctgatttggaaggtcttcaaaatatttctagccttatcatactcgttcagcgcc 223
            ||||||||||| || || ||||||||||||  |||||| |||||||| || |||||  | 
Sbjct: 2994 gcttctctgatctgaaaagtcttcaaaatagctctagctttatcatattcattcagttct 2935

                                                
Query: 224  accaatatgttctccaaacgacgcgccagcccacgt 259
            ||||||||||  | ||||||||| ||||||||||||
Sbjct: 2934 accaatatgtctttcaaacgacgagccagcccacgt 2899

>gb|DQ430328.1| Sorghum propinquum locus pSB1914 genomic sequence
          Length = 730

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 164 gcttctctgatttggaaggtcttcaaaatatttctagccttatcatactc 213
           ||||||||||  || || ||||||||||||  |||||| |||||||||||
Sbjct: 624 gcttctctgagctgaaacgtcttcaaaatagctctagctttatcatactc 575

>emb|AL591591.6| Human DNA sequence from clone RP11-450E21 on chromosome X, complete
             sequence
          Length = 104117

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 141   tatgtcaagggaaaaactaga 161
             |||||||||||||||||||||
Sbjct: 23542 tatgtcaagggaaaaactaga 23562

>emb|BX469926.18| Zebrafish DNA sequence from clone DKEY-229E3 in linkage group 20,
              complete sequence
          Length = 242408

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 59     aattagacattacaacattcc 79
              |||||||||||||||||||||
Sbjct: 117590 aattagacattacaacattcc 117610

>gb|AC078889.20| Homo sapiens 12 BAC RP11-335I12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163992

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 120    acaaaaatggaattcttgttc 140
              |||||||||||||||||||||
Sbjct: 116754 acaaaaatggaattcttgttc 116734

>emb|AL049435.1|HSM800220 Homo sapiens mRNA; cDNA DKFZp586B0220 (from clone DKFZp586B0220)
          Length = 2702

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 120  acaaaaatggaattcttgttc 140
            |||||||||||||||||||||
Sbjct: 2130 acaaaaatggaattcttgttc 2150

>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    cctgcttgccgccttcaaac 121
              ||||||||||||||||||||
Sbjct: 814519 cctgcttgccgccttcaaac 814538

>gb|AC107798.10| Mus musculus chromosome 8, clone RP23-4D24, complete sequence
          Length = 234420

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   aaaaatggaattcttgttct 141
             ||||||||||||||||||||
Sbjct: 90650 aaaaatggaattcttgttct 90631

>gb|AC158144.13| Mus musculus chromosome 7, clone RP23-82N3, complete sequence
          Length = 213341

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    tggaaggtcttcaaaatatt 195
              ||||||||||||||||||||
Sbjct: 101862 tggaaggtcttcaaaatatt 101843

>gb|AC110255.10| Mus musculus, clone RP23-274K7, complete sequence
          Length = 170587

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    aaaaatggaattcttgttct 141
              ||||||||||||||||||||
Sbjct: 112794 aaaaatggaattcttgttct 112775

>emb|AL590704.13| Human DNA sequence from clone RP11-106E7 on chromosome 6 Contains a
             novel pseudogene similar to FLJ23678 and part of the UTRN
             gene for utrophin (homologous to dystrophin) (DRP, DRP1,
             DMDL), complete sequence
          Length = 61097

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   aaggtcttcaaaatatttct 198
             ||||||||||||||||||||
Sbjct: 12316 aaggtcttcaaaatatttct 12297

>emb|AL589723.7| Human DNA sequence from clone RP11-204B7 on chromosome 6 Contains the
             TPMT gene for thiopurine S-methyltransferase, the gene for
             a novel protein similar to (TAT-interactive protein,
             72-KD; tripartite motif protein TRIM32; zinc-finger
             protein HT2A), complete sequence
          Length = 147927

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   cttgtttgataattccaaca 320
             ||||||||||||||||||||
Sbjct: 68175 cttgtttgataattccaaca 68156

>gb|AC152056.17| Glycine max clone gmp1-98f7, complete sequence
          Length = 122930

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   cttcaaacaaaaatggaatt 133
             ||||||||||||||||||||
Sbjct: 19760 cttcaaacaaaaatggaatt 19779

>gb|AC164638.4| Mus musculus BAC clone RP23-198N12 from chromosome 7, complete sequence
          Length = 242297

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    cctgaaatgtgtctactctt 297
              ||||||||||||||||||||
Sbjct: 223947 cctgaaatgtgtctactctt 223966

>emb|BX294147.1| Pirellula sp. strain 1 complete genome; segment 15/24
          Length = 314450

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   acgaaatccgtgaaaggctg 339
             ||||||||||||||||||||
Sbjct: 30404 acgaaatccgtgaaaggctg 30423

>gb|AC027680.5| Genomic sequence for Mus musculus, clone RP23-187P11, from chromosome
             15, complete sequence
          Length = 16492

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   cctgaaatgtgtctactctt 297
             ||||||||||||||||||||
Sbjct: 11996 cctgaaatgtgtctactctt 12015

>gb|AC145821.16| Papio anubis clone rp41-103i16, complete sequence
          Length = 169553

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 301    cttgtttgataattccaaca 320
              ||||||||||||||||||||
Sbjct: 160359 cttgtttgataattccaaca 160378

>gb|AC112222.2| Homo sapiens chromosome 3 clone RP11-114A11, complete sequence
          Length = 151031

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    cttgtttgataattccaaca 320
              ||||||||||||||||||||
Sbjct: 104022 cttgtttgataattccaaca 104003

>gb|AC087110.3| Homo sapiens chromosome 8, clone CTD-2033B22, complete sequence
          Length = 145544

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 147    aagggaaaaactagagagcttctc 170
              |||||||||||| |||||||||||
Sbjct: 140208 aagggaaaaactggagagcttctc 140185

>gb|AC112515.4| Homo sapiens chromosome 3 clone RP11-697B5, complete sequence
          Length = 179154

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   cttgtttgataattccaaca 320
             ||||||||||||||||||||
Sbjct: 37372 cttgtttgataattccaaca 37353

>gb|AC097715.3| Homo sapiens BAC clone RP11-563A13 from 2, complete sequence
          Length = 143642

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    acattacaacattcccgtga 84
             ||||||||||||||||||||
Sbjct: 83264 acattacaacattcccgtga 83283

>gb|AE009552.1| Brucella melitensis 16M chromosome I, section 109 of 195 of the
            complete sequence
          Length = 10550

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 102  cctgcttgccgccttcaaac 121
            ||||||||||||||||||||
Sbjct: 4990 cctgcttgccgccttcaaac 4971

>gb|AC011716.7|AC011716 Homo sapiens chromosome 8 clone RP11-65D13, complete sequence
          Length = 172327

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 147    aagggaaaaactagagagcttctc 170
              |||||||||||| |||||||||||
Sbjct: 152560 aagggaaaaactggagagcttctc 152583

>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    cctgcttgccgccttcaaac 121
              ||||||||||||||||||||
Sbjct: 836220 cctgcttgccgccttcaaac 836239

>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence,
              strain 2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    cctgcttgccgccttcaaac 121
              ||||||||||||||||||||
Sbjct: 832498 cctgcttgccgccttcaaac 832517


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,361,130
Number of Sequences: 3902068
Number of extensions: 3361130
Number of successful extensions: 60348
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60268
Number of HSP's gapped (non-prelim): 80
length of query: 348
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 326
effective length of database: 17,147,199,772
effective search space: 5589987125672
effective search space used: 5589987125672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)