>PDCD1_HUMAN (Q15116) Programmed cell death protein 1 precursor (Protein PD-1)|
           (hPD-1) (CD279 antigen)
          Length = 288

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = +1

Query: 7   TCSMNNATK-FVLNWYKILVNNGT 75
           TCS +N ++ FVLNWY++  +N T
Sbjct: 53  TCSFSNTSESFVLNWYRMSPSNQT 76


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,345,577
Number of Sequences: 219361
Number of extensions: 378032
Number of successful extensions: 684
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 80,573,946
effective HSP length: 43
effective length of database: 71,141,423
effective search space used: 1707394152
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)