>emb|BX511311.24| Zebrafish DNA sequence from clone DKEY-278G4 in linkage group 8, complete
              sequence
          Length = 242845

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 147    tgcatatatttgatatacattg 168
              ||||||||||||||||||||||
Sbjct: 191730 tgcatatatttgatatacattg 191709

>gb|AC068048.6| Homo sapiens BAC clone RP11-263D19 from 2, complete sequence
          Length = 101713

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 149   catatatttgatatacattgat 170
             ||||||||||||||||||||||
Sbjct: 52540 catatatttgatatacattgat 52561

>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
          Length = 124050

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     ctttgcgtttcattgcattga 29
             |||||||||||||||||||||
Sbjct: 22622 ctttgcgtttcattgcattga 22642

>emb|AL162724.16| Human DNA sequence from clone RP11-121A14 on chromosome 9 Contains the
             5' end of the NEK6 gene for NIMA (never in mitosis gene
             a)-related kinase 6, two novel genes and a CpG island,
             complete sequence
          Length = 122542

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 248   gcttccctttgtttcttcttg 268
             |||||||||||||||||||||
Sbjct: 29897 gcttccctttgtttcttcttg 29877

>ref|XM_393635.2| PREDICTED: Apis mellifera similar to CG31240-PA (LOC410151), mRNA
          Length = 2179

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 147  tgcatatatttgatatacatt 167
            |||||||||||||||||||||
Sbjct: 1983 tgcatatatttgatatacatt 1963

>gb|AC163099.5| Mus musculus chromosome 8, clone RP23-395L6, complete sequence
          Length = 188439

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     accacacatggtaagagaac 93
              ||||||||||||||||||||
Sbjct: 178030 accacacatggtaagagaac 178049

>gb|AC167021.3| Mus musculus BAC clone RP23-152D8 from chromosome 6, complete sequence
          Length = 222021

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    atatatttgatatacattga 169
              ||||||||||||||||||||
Sbjct: 136784 atatatttgatatacattga 136765

>gb|AY672998.1| Triticum aestivum cultivar Soleil putative non-LTR retroelement and
            Tourist MITE, complete sequence; and phytochrome C
            (PhyC-5A) gene, complete cds
          Length = 9533

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 9    ctttgcgtttcattgcattgatag 32
            |||||||| |||||||||||||||
Sbjct: 3997 ctttgcgtatcattgcattgatag 3974

>gb|AC095688.7| Rattus norvegicus 2 BAC CH230-9C20 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 176590

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   cgaaaagcaaatattttaag 350
             ||||||||||||||||||||
Sbjct: 28591 cgaaaagcaaatattttaag 28572

>gb|AC118645.13| Mus musculus chromosome 15, clone RP24-114E9, complete sequence
          Length = 172076

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    ggtaagagaacaggaattag 102
             ||||||||||||||||||||
Sbjct: 16786 ggtaagagaacaggaattag 16767

>gb|AC005162.1| Homo sapiens BAC clone CTB-113D17 from 7, complete sequence
          Length = 111682

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   ttccctttgtttcttcttgt 269
             ||||||||||||||||||||
Sbjct: 14467 ttccctttgtttcttcttgt 14448

>gb|AC123865.5| Mus musculus BAC clone RP23-365C14 from chromosome 10, complete
            sequence
          Length = 212994

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 296  gtttgctgtacaatagattg 315
            ||||||||||||||||||||
Sbjct: 5598 gtttgctgtacaatagattg 5579

>gb|AC122467.3| Mus musculus BAC clone RP24-311K2 from chromosome 6, complete sequence
          Length = 110480

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   atatatttgatatacattga 169
             ||||||||||||||||||||
Sbjct: 34960 atatatttgatatacattga 34941

>emb|AL023844.1|CEY48A6B Caenorhabditis elegans YAC Y48A6B, complete sequence
          Length = 75073

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   tgcaaatgatcacaaggttt 299
             ||||||||||||||||||||
Sbjct: 16816 tgcaaatgatcacaaggttt 16797

>gb|AC122340.3| Mus musculus BAC clone RP23-354B8 from 15, complete sequence
          Length = 183991

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    ggtaagagaacaggaattag 102
             ||||||||||||||||||||
Sbjct: 69410 ggtaagagaacaggaattag 69429

>gb|AC105951.9| Mus musculus chromosome 5, clone RP23-475D21, complete sequence
          Length = 178610

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    acacaggaaatgtcactttt 125
              ||||||||||||||||||||
Sbjct: 127766 acacaggaaatgtcactttt 127747

>emb|AL365259.23| Human DNA sequence from clone RP11-624M8 on chromosome 6 Contains part
             of a novel gene, complete sequence
          Length = 106607

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   ttccctttgtttcttcttgt 269
             ||||||||||||||||||||
Sbjct: 23420 ttccctttgtttcttcttgt 23401

>gb|BT009446.1| Triticum aestivum clone wlmk8.pk0009.d3:fis, full insert mRNA
            sequence
          Length = 1900

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    ctttgcgtttcattgcattg 28
            ||||||||||||||||||||
Sbjct: 1886 ctttgcgtttcattgcattg 1867

>gb|AC087644.8| Homo sapiens chromosome 17, clone RP11-403E9, complete sequence
          Length = 102286

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 248  gcttccctttgtttcttcttgttaagct 275
            ||||||||| ||||||||||| ||||||
Sbjct: 2453 gcttcccttagtttcttcttggtaagct 2480

>gb|AC104984.14| Homo sapiens chromosome 17, clone RP11-354P11, complete sequence
          Length = 175136

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 248   gcttccctttgtttcttcttgttaagct 275
             ||||||||| ||||||||||| ||||||
Sbjct: 21252 gcttcccttagtttcttcttggtaagct 21225

>gb|AC008213.4|AC008213 Drosophila melanogaster, chromosome 3R, region 97B-97B, BAC clone
             BACR15K06, complete sequence
          Length = 183370

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   caaatattttaagcactcac 357
             ||||||||||||||||||||
Sbjct: 13552 caaatattttaagcactcac 13533

>gb|AC158805.4| Mus musculus 10 BAC RP24-222M1 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 131325

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 296   gtttgctgtacaatagattg 315
             ||||||||||||||||||||
Sbjct: 95174 gtttgctgtacaatagattg 95155

>gb|AC008212.8|AC008212 Drosophila melanogaster, chromosome 3R, region 97A-97B, BAC clone
              BACR19L21, complete sequence
          Length = 162876

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 338    caaatattttaagcactcac 357
              ||||||||||||||||||||
Sbjct: 100598 caaatattttaagcactcac 100579

>gb|AC099406.3| Papio anubis clone RP41-290L4, complete sequence
          Length = 163724

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    ttccctttgtttcttcttgt 269
              ||||||||||||||||||||
Sbjct: 112848 ttccctttgtttcttcttgt 112829

>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 329     agcgaaaagcaaatatttta 348
               ||||||||||||||||||||
Sbjct: 1286456 agcgaaaagcaaatatttta 1286437

>emb|AJ295224.1|TAE295224 Triticum aestivum phyC gene for phytochrome C, exons 1-4
          Length = 7219

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 9   ctttgcgtttcattgcattgatag 32
           |||||||| |||||||||||||||
Sbjct: 834 ctttgcgtatcattgcattgatag 811

>emb|BX255967.4| Zebrafish DNA sequence from clone CH211-191G22 in linkage group 7,
              complete sequence
          Length = 146969

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 289    tcacaaggtttgctgtacaa 308
              ||||||||||||||||||||
Sbjct: 122325 tcacaaggtttgctgtacaa 122344

>gb|AE003756.3| Drosophila melanogaster chromosome 3R, section 94 of 118 of the
             complete sequence
          Length = 322332

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   caaatattttaagcactcac 357
             ||||||||||||||||||||
Sbjct: 74445 caaatattttaagcactcac 74426

>dbj|AP003391.1| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2589C9, complete
             sequences
          Length = 46239

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 15    gtttcattgcattgatagaaaaga 38
             |||||||||||||||||| |||||
Sbjct: 37470 gtttcattgcattgatagcaaaga 37493

>gb|AC107236.8| Mus musculus chromosome 8, clone RP23-296C23, complete sequence
          Length = 193105

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    accacacatggtaagagaac 93
             ||||||||||||||||||||
Sbjct: 86146 accacacatggtaagagaac 86165

>gb|AC161507.2| Mus musculus chromosome 5, clone RP23-76L18, complete sequence
          Length = 262831

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    acacaggaaatgtcactttt 125
              ||||||||||||||||||||
Sbjct: 252522 acacaggaaatgtcactttt 252541


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,550,050
Number of Sequences: 3902068
Number of extensions: 4550050
Number of successful extensions: 98946
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98878
Number of HSP's gapped (non-prelim): 68
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)