>SYA_ARATH (P36428) Alanyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.7)|
            (Alanine--tRNA ligase) (AlaRS)
          Length = 1003

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
 Frame = -2

Query: 457  ASNKAVIYAGVPPDAPNGFKVLD---WLTPSIAPXXXXXXXXXXXXXXXXGSDASRVKEA 287
            ++NKAV+ AGVP +  + FK LD   WLT ++ P                G+DAS+V+ A
Sbjct: 932  STNKAVVCAGVP-EKSDQFKPLDVTEWLTTALGPLKGRCGKGKGGLASGQGTDASQVQAA 990

Query: 286  MELATQIASMKLS 248
            +++A+  ASMKL+
Sbjct: 991  LDMASSFASMKLN 1003

>LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late envelope protein|
           18) (Small proline-rich-like epidermal differentiation
           complex protein 5A)
          Length = 118

 Score = 32.0 bits (71), Expect = 0.78
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
 Frame = -1

Query: 434 CRRTSGCTQWLQGVGLAYTFNRTTQGKRRRRQEWSCPGP-------GK*CFSGQGGNGAC 276
           C  +SG     +G G   + +R  Q  RRR Q  SC G        G  C    GG+G C
Sbjct: 52  CGSSSGGCCSSEGGGCCLSHHRPRQSLRRRPQSSSCCGSGSGQQSGGSSCCHSSGGSGCC 111

Query: 275 Y 273
           +
Sbjct: 112 H 112

>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (Ca(v)3.3)
          Length = 2223

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = -1

Query: 230 SSYILSGCLMVVLTLLSQIVMREHKIIHENQLEAVSIFTLQDVV*SSQLSCNYSLVYQME 51
           S ++++ CL+V+ T  S+   REH+++ E +   +S  T+      ++    Y  ++Q  
Sbjct: 386 SFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASY---AEPGDCYEEIFQYV 442

Query: 50  CYI*R 36
           C+I R
Sbjct: 443 CHILR 447

>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.3)
           (CaVT.3)
          Length = 2201

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 17/65 (26%), Positives = 35/65 (53%)
 Frame = -1

Query: 230 SSYILSGCLMVVLTLLSQIVMREHKIIHENQLEAVSIFTLQDVV*SSQLSCNYSLVYQME 51
           S ++++ CL+V+ T  S+   REH+++ E +   +S  T+      ++    Y  ++Q  
Sbjct: 384 SFFMINLCLVVIATQFSETKQREHRLMLEQRQRYLSSSTVASY---AEPGDCYEEIFQYV 440

Query: 50  CYI*R 36
           C+I R
Sbjct: 441 CHILR 445

>DHSD_MOUSE (Q9CXV1) Succinate dehydrogenase [ubiquinone] cytochrome b small|
           subunit, mitochondrial precursor (CybS)
           (Succinate-ubiquinone reductase membrane anchor subunit)
           (QPs3) (CII-4) (Succinate dehydrogenase complex subunit
           D) (Succinate-ubiquinone
          Length = 159

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -3

Query: 447 RLLYMPAYLRMHPMASRCWIG-LHLQ-SHHSREEEAAARMVLPRAREVMLLG 298
           R  Y+ A+L+  P   RC    +HL  SHHS  + A+      R   V+LLG
Sbjct: 27  RPAYVSAFLQDQPTQGRCGTQHIHLSPSHHSGSKAASLHWTSERVVSVLLLG 78

>K0286_MOUSE (Q6ZQE4) Protein KIAA0286|
          Length = 437

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 14/61 (22%), Positives = 28/61 (45%)
 Frame = -1

Query: 335 WSCPGPGK*CFSGQGGNGACYPDSFDEAELIC*DWSSYILSGCLMVVLTLLSQIVMREHK 156
           WS  GPG  C+   GG GA               W   +++GC++     ++ ++++E +
Sbjct: 10  WSAVGPGPRCWGAGGGGGA--------------TWLLLVVAGCVVCGSADVNVVMLQESQ 55

Query: 155 I 153
           +
Sbjct: 56  V 56

>STAB1_HUMAN (Q9NY15) Stabilin-1 precursor (FEEL-1 protein) (MS-1 antigen)|
          Length = 2570

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +2

Query: 206  SSHLICMKTSLN-KSAQLHRSYLGSKLHCLLDPRSITSLALGK 331
            S H  C+ T LN +  + H  Y+G  L CL +        LG+
Sbjct: 2145 SEHANCLSTGLNTRRCECHAGYVGDGLQCLEESEPPVDRCLGQ 2187


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,340,657
Number of Sequences: 219361
Number of extensions: 1330462
Number of successful extensions: 2926
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2924
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)