>emb|AJ001341.1|HVACYLCOA Hordeum vulgare mRNA for putative acyl-CoA oxidase
          Length = 2273

 Score =  430 bits (217), Expect = e-117
 Identities = 236/241 (97%), Gaps = 1/241 (0%)
 Strand = Plus / Minus

                                                                        
Query: 100  actactaagtatctcgacacatttgctaaacatgtattaaccgaatcacaaccacagcag 159
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2273 actactaagtatctcgacacatttgctaaacatgtattaaccgaatcacaaccacagcag 2214

                                                                        
Query: 160  ctgttctagtaataataccaccaaatgctaattaattacccaggagggagtaaaaatcct 219
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2213 ctgttctagtaataataccaccaaatgctaattaattacccaggagggagtaaaaatcct 2154

                                                                        
Query: 220  tttattcttctatcaacaacagtgcctgtcgctcttgcctttccaacaaagtgaacaaca 279
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2153 tttattcttctaccaacaacagtgcctgtcgctcttgcctttccaacaaagtgaacaaca 2094

                                                                        
Query: 280  accaatcacctctcccctagatttgatcctcttattaattactgctccacatccgctgtc 339
            |||||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||
Sbjct: 2093 accaatcacctctccccttgatttgat-ctcttattaattatcgctccacatccgctgtc 2035

             
Query: 340  c 340
            |
Sbjct: 2034 c 2034

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 207     gagtaaaaatccttttattcttctat 232
               |||||||| |||||||||||||||||
Sbjct: 6075401 gagtaaaattccttttattcttctat 6075376

>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0466B10
          Length = 151806

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 207    gagtaaaaatccttttattcttctat 232
              |||||||| |||||||||||||||||
Sbjct: 143289 gagtaaaattccttttattcttctat 143264

>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031E09
          Length = 176349

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 207   gagtaaaaatccttttattcttctat 232
             |||||||| |||||||||||||||||
Sbjct: 99758 gagtaaaattccttttattcttctat 99733

>gb|AC151527.13| Medicago truncatula clone mth2-135i19, complete sequence
          Length = 132470

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 18   aaattcaagacaaaccattccatta 42
            |||||||| ||||||||||||||||
Sbjct: 7603 aaattcaaaacaaaccattccatta 7579

>emb|Z99164.2|SPAC29B12 S.pombe chromosome I cosmid c29B12
          Length = 37683

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 85    ttcacacgttttgctactact 105
             |||||||||||||||||||||
Sbjct: 34431 ttcacacgttttgctactact 34411

>ref|NM_001020422.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPAC29B12.14c), partial mRNA
          Length = 1746

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 85  ttcacacgttttgctactact 105
           |||||||||||||||||||||
Sbjct: 823 ttcacacgttttgctactact 843

>ref|XM_475585.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 888

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 44  tcttgccattttcctccttg 63
           ||||||||||||||||||||
Sbjct: 868 tcttgccattttcctccttg 849

>gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1264_A04,
             complete sequence
          Length = 133271

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    tcttgccattttcctccttg 63
             ||||||||||||||||||||
Sbjct: 16905 tcttgccattttcctccttg 16886

>gb|AC007393.3| Homo sapiens BAC clone RP11-451J3 from 7, complete sequence
          Length = 71082

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 216  tccttttattcttctatcaa 235
            ||||||||||||||||||||
Sbjct: 7214 tccttttattcttctatcaa 7195

>gb|AC004994.1| Homo sapiens PAC clone RP5-1194E15 from 7, complete sequence
          Length = 80331

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 208   agtaaaaatccttttattcttcta 231
             |||||||||||||||| |||||||
Sbjct: 27365 agtaaaaatccttttactcttcta 27388

>gb|AC145378.2| Pan troglodytes BAC clone RP43-56P12 from 7, complete sequence
          Length = 186835

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 208    agtaaaaatccttttattcttcta 231
              |||||||||||||||| |||||||
Sbjct: 184259 agtaaaaatccttttactcttcta 184282

>gb|AC125139.4| Mus musculus BAC clone RP24-326G1 from chromosome 1, complete sequence
          Length = 149229

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   ctttccaacaaagtgaacaa 277
             ||||||||||||||||||||
Sbjct: 16216 ctttccaacaaagtgaacaa 16197

>gb|AC145783.1| Pan troglodytes BAC clone RP43-27O9 from 7, complete sequence
          Length = 175651

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 208    agtaaaaatccttttattcttcta 231
              |||||||||||||||| |||||||
Sbjct: 153103 agtaaaaatccttttactcttcta 153126

>gb|AC142310.1| Pan troglodytes BAC clone RP43-45P13 from 7, complete sequence
          Length = 197471

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 208   agtaaaaatccttttattcttcta 231
             |||||||||||||||| |||||||
Sbjct: 67191 agtaaaaatccttttactcttcta 67214

>emb|AL133321.11| Human DNA sequence from clone RP13-17E1 on chromosome X Contains part
             of the PCDH11X gene for protocadherin 11 X-linked,
             complete sequence
          Length = 170805

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   taataataccaccaaatgct 188
             ||||||||||||||||||||
Sbjct: 57414 taataataccaccaaatgct 57395

>gb|AC153725.3| Medicago truncatula clone mth2-78c5, complete sequence
          Length = 137377

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   ctagatttgatcctcttatt 315
             ||||||||||||||||||||
Sbjct: 80675 ctagatttgatcctcttatt 80694

>dbj|AK147373.1| Mus musculus cDNA, RIKEN full-length enriched library,
           clone:M5C1023H17 product:unclassifiable, full insert
           sequence
          Length = 7610

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 258 ctttccaacaaagtgaacaa 277
           ||||||||||||||||||||
Sbjct: 420 ctttccaacaaagtgaacaa 439

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 44      tcttgccattttcctccttg 63
               ||||||||||||||||||||
Sbjct: 2341305 tcttgccattttcctccttg 2341286

>gb|AC139016.12| Homo sapiens 12 BAC RP11-411N4 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 28186

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 211  aaaaatccttttattcttct 230
            ||||||||||||||||||||
Sbjct: 8659 aaaaatccttttattcttct 8640

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 35      ttccattattcttgccattt 54
               ||||||||||||||||||||
Sbjct: 2283205 ttccattattcttgccattt 2283224

>dbj|AK065644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037C13, full
           insert sequence
          Length = 1182

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 44  tcttgccattttcctccttg 63
           ||||||||||||||||||||
Sbjct: 954 tcttgccattttcctccttg 935

>emb|AL929182.4| Zebrafish DNA sequence from clone CH211-195E3 in linkage group 20,
              complete sequence
          Length = 225515

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     ggaaattcaagacaaaccat 35
              ||||||||||||||||||||
Sbjct: 210229 ggaaattcaagacaaaccat 210210

>gb|AC004072.1|AC004072 Human Chromosome X clone bWXD342, complete sequence
          Length = 170658

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    taataataccaccaaatgct 188
              ||||||||||||||||||||
Sbjct: 150583 taataataccaccaaatgct 150602

>gb|AC131591.13| Mus musculus chromosome 1, clone RP24-541A5, complete sequence
          Length = 175644

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   ctttccaacaaagtgaacaa 277
             ||||||||||||||||||||
Sbjct: 10524 ctttccaacaaagtgaacaa 10543

>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03,
             complete sequence
          Length = 107870

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    tcttgccattttcctccttg 63
             ||||||||||||||||||||
Sbjct: 69220 tcttgccattttcctccttg 69201

>dbj|AP000945.5| Homo sapiens genomic DNA, chromosome 18p clone:RP11-870F11, complete
             sequences
          Length = 216975

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   gctaattaattacccaggag 205
             ||||||||||||||||||||
Sbjct: 98153 gctaattaattacccaggag 98134


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,630,393
Number of Sequences: 3902068
Number of extensions: 3630393
Number of successful extensions: 74084
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73975
Number of HSP's gapped (non-prelim): 108
length of query: 340
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 318
effective length of database: 17,147,199,772
effective search space: 5452809527496
effective search space used: 5452809527496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)