>PSB3_CAEEL (Q23237) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome|
           subunit beta 3)
          Length = 204

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 101 DNSKEYISCQTTLGCVISIAAARDCIVTSQG 9
           D +K YI C  T+GCV   +A RD +    G
Sbjct: 114 DTNKPYICCMDTIGCV---SAPRDFVAVGTG 141

>RECG_AQUAE (O67837) ATP-dependent DNA helicase recG (EC 3.6.1.-)|
          Length = 792

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/42 (28%), Positives = 26/42 (61%)
 Frame = +1

Query: 7   NPCEVTIQSLAAAIEITQPRVVWQEIYSFELSLWRKDITGKK 132
           NP ++++ +L +  ++   RV++ E++ F+L+L  K    KK
Sbjct: 296 NPKDISVNALNSFTDLYHKRVIYDELFLFQLALLLKKQEIKK 337

>UL52_SHV21 (P14346) Helicase/primase complex protein (Probable DNA replication|
           gene 56 protein)
          Length = 835

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 146 YNLTNSTTTDSTFSVQHLPRPALMNHHFYLGSSTIDRPRNWI 271
           YNL  +  +    ++Q L    +  HH Y   ST ++P NWI
Sbjct: 512 YNLCCTLRSLILETLQLLGPVDIDTHHVYFFKSTCEKPENWI 553

>BI54_MOUSE (P28664) Brain protein I54|
          Length = 130

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 8/77 (10%)
 Frame = -1

Query: 222 WFIRAGLGKCCTLNVLSV--------VVEFVRLYCQYSFFSCNILAPQRQFKGIYLLPDH 67
           WF+ + LG+ C L  L          ++EF   +    FF     AP+    G +     
Sbjct: 15  WFVGSALGRSCPLGFLGFHQPSLSLDILEFCGKFFSLEFFQLTACAPKEGVSGTHC---- 70

Query: 66  PRLCNFYSSGKRLYCDF 16
            R+ N + +     C F
Sbjct: 71  TRVKNLWINALNFVCLF 87

>DRD2A_XENLA (P24628) D(2) dopamine receptor A (D2R-A) (D2R 1)|
          Length = 442

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 23/71 (32%), Positives = 34/71 (47%)
 Frame = -2

Query: 227 NGGSSGQALVNVVH*MYYRLLLSLLDCIVNIVFFPVISLRHKDNSKEYISCQTTLGCVIS 48
           N G++G A+    H  YY +LL+LL  +  IVF  V+        K   + QTT   +I 
Sbjct: 14  NNGTNGTAVDQKPHYNYYAMLLTLL--VFVIVFGNVLVCIAVSREK---ALQTTTNYLIV 68

Query: 47  IAAARDCIVTS 15
             A  D +V +
Sbjct: 69  SLAVADLLVAT 79

>CPT1C_MOUSE (Q8BGD5) Carnitine O-palmitoyltransferase I, brain isoform (EC|
           2.3.1.21) (Carnitine palmitoyltransferase 1C) (CPT IC)
          Length = 798

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 22  TIQSLAAAIEITQPRVVWQEIYSFELSLWRKDI 120
           ++ S  A +E++ P  VWQEIY   L  W++ +
Sbjct: 13  SLSSDGAEVELSSP--VWQEIYLCALRSWKRHL 43


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,664,458
Number of Sequences: 219361
Number of extensions: 1053981
Number of successful extensions: 2691
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2691
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)