ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl04e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1C8AP2_MOUSE (Q9WUF3) CASP8-associated protein 2 (FLICE-associate... 29 3.7
2SHS1_YEAST (Q07657) Seventh homolog of septin 1 (Septation prote... 29 4.9

>C8AP2_MOUSE (Q9WUF3) CASP8-associated protein 2 (FLICE-associated huge protein)|
          Length = 1962

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +3

Query: 279  PGYVILHEESK--FIIIIRNALPSLTAGIRHRIIA 377
            P + ++ E+S   FI+ IR A PS + G++H ++A
Sbjct: 1507 PMHAVIMEKSNDHFIVKIRRATPSTSPGLKHGVVA 1541



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>SHS1_YEAST (Q07657) Seventh homolog of septin 1 (Septation protein 7)|
          Length = 551

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
 Frame = +2

Query: 65  FSSNISEYKNVPATFSY-----YLQSNDQRKLMLPPLGMQLISSYPLPKYISEF 211
           F++N+ E K  P  + Y      + SN + K++ P   +   S   +P Y+SEF
Sbjct: 39  FANNLLETKIFPHKYQYGKSNASISSNPEVKVIAPTKVVSFNSKNGIPSYVSEF 92


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,777,260
Number of Sequences: 219361
Number of extensions: 1189272
Number of successful extensions: 2650
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2650
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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