>ref|XM_467429.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3201

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 312  ctaataatcacaactcatcatgagattctggttctgaatcgttagtctttt 362
            |||||||||||||||||||||||| ||| |||||| |||||| ||||||||
Sbjct: 2860 ctaataatcacaactcatcatgagcttcaggttctaaatcgtcagtctttt 2810



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 125  atgccctagagaccacaatactgctatacagggatt 160
            ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 3093 atgccatagagaccataatactgctatacagcgatt 3058

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                   
Query: 312      ctaataatcacaactcatcatgagattctggttctgaatcgttagtctttt 362
                |||||||||||||||||||||||| ||| |||||| |||||| ||||||||
Sbjct: 29475891 ctaataatcacaactcatcatgagcttcaggttctaaatcgtcagtctttt 29475841



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                    
Query: 125      atgccctagagaccacaatactgctatacagggatt 160
                ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 29476124 atgccatagagaccataatactgctatacagcgatt 29476089

>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1038_A06
          Length = 147836

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                
Query: 312   ctaataatcacaactcatcatgagattctggttctgaatcgttagtctttt 362
             |||||||||||||||||||||||| ||| |||||| |||||| ||||||||
Sbjct: 70921 ctaataatcacaactcatcatgagcttcaggttctaaatcgtcagtctttt 70871



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 125   atgccctagagaccacaatactgctatacagggatt 160
             ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 71154 atgccatagagaccataatactgctatacagcgatt 71119

>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1311_H06
          Length = 139868

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                 
Query: 312    ctaataatcacaactcatcatgagattctggttctgaatcgttagtctttt 362
              |||||||||||||||||||||||| ||| |||||| |||||| ||||||||
Sbjct: 126763 ctaataatcacaactcatcatgagcttcaggttctaaatcgtcagtctttt 126713



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 125    atgccctagagaccacaatactgctatacagggatt 160
              ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 126996 atgccatagagaccataatactgctatacagcgatt 126961

>dbj|AK100997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146N12, full
            insert sequence
          Length = 3201

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 312  ctaataatcacaactcatcatgagattctggttctgaatcgttagtctttt 362
            |||||||||||||||||||||||| ||| |||||| |||||| ||||||||
Sbjct: 2860 ctaataatcacaactcatcatgagcttcaggttctaaatcgtcagtctttt 2810



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 125  atgccctagagaccacaatactgctatacagggatt 160
            ||||| ||||||||| ||||||||||||||| ||||
Sbjct: 3093 atgccatagagaccataatactgctatacagcgatt 3058

>gb|AC116605.1| Homo sapiens chromosome 5 clone RP11-443O6, complete sequence
          Length = 164774

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 28    gttatcaaaatataaatgagttt 50
             |||||||||||||||||||||||
Sbjct: 82474 gttatcaaaatataaatgagttt 82496

>gb|AC106811.2| Homo sapiens chromosome 5 clone RP11-551B15, complete sequence
          Length = 148362

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 28   gttatcaaaatataaatgagttt 50
            |||||||||||||||||||||||
Sbjct: 5607 gttatcaaaatataaatgagttt 5629

>gb|AY458646.2| Uncultured bacterium 578 clone EBAC080-L31E09 genomic sequence
          Length = 78078

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 268   agtatattgagcagtatctct 288
             |||||||||||||||||||||
Sbjct: 53130 agtatattgagcagtatctct 53110

>emb|CR388121.11| Zebrafish DNA sequence from clone DKEY-161F5 in linkage group 15,
             complete sequence
          Length = 179357

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 144   actgctatacagggatttata 164
             |||||||||||||||||||||
Sbjct: 87653 actgctatacagggatttata 87633

>gb|AC153837.4| Mus musculus 6 BAC RP23-192D5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 232039

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 22     gtagctgttatcaaaatataa 42
              |||||||||||||||||||||
Sbjct: 212740 gtagctgttatcaaaatataa 212760

>emb|AL691456.7| Mouse DNA sequence from clone RP23-468K2 on chromosome 4 Contains part
             of the Astn2 gene for astrotactin 2 and the Trim32 gene
             for tripartite motif protein 32, complete sequence
          Length = 158960

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 355   agtcttttccggggcatctga 375
             |||||||||||||||||||||
Sbjct: 19411 agtcttttccggggcatctga 19431

>ref|XM_623868.1| PREDICTED: Apis mellifera similar to ENSANGP00000013944
           (LOC551473), mRNA
          Length = 792

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 18  tatagtagctgttatcaaaat 38
           |||||||||||||||||||||
Sbjct: 400 tatagtagctgttatcaaaat 380

>gb|AY110979.1| Zea mays CL36581_1 mRNA sequence
          Length = 1101

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 319 tcacaactcatcatgagattctggttctgaatc 351
           ||||||||| ||||||| ||| |||||||||||
Sbjct: 385 tcacaactcgtcatgaggttcaggttctgaatc 417

>gb|AC132305.3| Mus musculus BAC clone RP24-286A19 from 6, complete sequence
          Length = 187465

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 22    gtagctgttatcaaaatataa 42
             |||||||||||||||||||||
Sbjct: 37955 gtagctgttatcaaaatataa 37975

>gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5, complete sequence
          Length = 219218

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 239   caaaactgtggtacaaactatctt 262
             |||||||||| |||||||||||||
Sbjct: 48873 caaaactgtgttacaaactatctt 48850

>gb|AY375291.1| Buchnera aphidicola (Chaitophorus populeti)
            phosphoribosylformimino-5-aminoimidazole carboxamide
            ribotide isomerase (hisA) gene, partial cds; imidazole
            glycerol phosphatase synthase subunit (hisF), histidine
            biosynthesis bifunctional protein (hisIE),
            6-phosphogluconate dehydrogenase (gnd), 2-isopropylmalate
            synthase (leuA), 3-isopropylmalate dehydratase small
            subunit (leuD), 3-isopropylmalate dehydratase large
            subunit (leuC), and 3-isopropylmalate dehydrogenase
            (leuB) genes, complete cds; and deoxycytidine
            triphosphate deaminase (dcd) gene, partial cds
          Length = 8619

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   gttatcaaaatataaatgag 47
            ||||||||||||||||||||
Sbjct: 7237 gttatcaaaatataaatgag 7256

>emb|AL450321.15| Mouse DNA sequence from clone RP23-232M10 on chromosome 13 Contains a
             novel gene, a non-POU domain containing octamer-binding
             protein (Nono) pseudogene, a Sin3-associated polypeptide
             18 (Sap18) pseudogene, the 5' end of a novel gene and a
             CpG island, complete sequence
          Length = 209175

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    caaaatataaatgagtttca 52
             ||||||||||||||||||||
Sbjct: 61562 caaaatataaatgagtttca 61543

>gb|AC090578.6| Homo sapiens chromosome 8, clone RP11-642C5, complete sequence
          Length = 187209

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     aaaatataaatgagtttcag 53
              ||||||||||||||||||||
Sbjct: 116768 aaaatataaatgagtttcag 116787

>gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, complete sequence
          Length = 173808

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gatttatatcaaattcttct 176
             ||||||||||||||||||||
Sbjct: 58015 gatttatatcaaattcttct 57996

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 320     cacaactcatcatgagattc 339
               ||||||||||||||||||||
Sbjct: 4993072 cacaactcatcatgagattc 4993053

>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0049I08
          Length = 144379

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   cacaactcatcatgagattc 339
             ||||||||||||||||||||
Sbjct: 34761 cacaactcatcatgagattc 34742


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,405,450
Number of Sequences: 3902068
Number of extensions: 3405450
Number of successful extensions: 62103
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62027
Number of HSP's gapped (non-prelim): 76
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)