Clone Name | rbastl04e02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | DEGP7_ARATH (Q8RY22) Protease Do-like 7 (EC 3.4.21.-) | 95 | 1e-19 | 2 | YIFC_SCHPO (Q9P7S1) Hypothetical protein C23G3.12c in chromosome I | 37 | 0.033 | 3 | YNM3_YEAST (P53920) Hypothetical 110.9 kDa protein in SPC98-TOM7... | 35 | 0.095 | 4 | CSD_PSEPK (Q9Z408) Probable cysteine desulfurase (EC 2.8.1.7) | 31 | 1.4 | 5 | PGK_NITEU (Q82XE8) Phosphoglycerate kinase (EC 2.7.2.3) | 29 | 5.2 | 6 | METX_YEAST (Q04533) Putative cystathionine gamma-synthase YML082... | 28 | 8.9 |
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>DEGP7_ARATH (Q8RY22) Protease Do-like 7 (EC 3.4.21.-)| Length = 1097 Score = 94.7 bits (234), Expect = 1e-19 Identities = 41/55 (74%), Positives = 47/55 (85%) Frame = -2 Query: 458 KGLEDREFVRVKTVHLNGKPRVLTLKQDLHYWPTWELTFEPETDTWKRRTIKALQ 294 K LE +FVR++TVHLNGKPRVLTLKQDLHYWPTWEL F+PET W+R +KALQ Sbjct: 1043 KELEHGQFVRIRTVHLNGKPRVLTLKQDLHYWPTWELRFDPETALWRRNILKALQ 1097
>YIFC_SCHPO (Q9P7S1) Hypothetical protein C23G3.12c in chromosome I| Length = 996 Score = 36.6 bits (83), Expect = 0.033 Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -2 Query: 461 VKGLEDREFVRVKTVHLNGKPRVLTLKQDLHYWPTWELTFEPETDT-WK 318 ++ ++D +VRV T + P VLT+K + HY+PT +L + + + W+ Sbjct: 913 IRKIDDNSYVRVSTSTFDKVPVVLTIKMNKHYFPTIDLVQDAKAENGWR 961
>YNM3_YEAST (P53920) Hypothetical 110.9 kDa protein in SPC98-TOM70 intergenic| region Length = 997 Score = 35.0 bits (79), Expect = 0.095 Identities = 15/49 (30%), Positives = 28/49 (57%) Frame = -2 Query: 467 QVVKGLEDREFVRVKTVHLNGKPRVLTLKQDLHYWPTWELTFEPETDTW 321 +VVK + D + +++ + + P ++LK + HY+PT EL + T W Sbjct: 936 KVVKTIPDNSYCKMRLMTFDNVPFAISLKTNYHYFPTAELKRDNITHKW 984
>CSD_PSEPK (Q9Z408) Probable cysteine desulfurase (EC 2.8.1.7)| Length = 401 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +1 Query: 106 QLSTGNEILMSSIELHYILVPTLTLAHRHRQHFRVPRLSMLG 231 +L G+EI +S++E H L+P LAHR H V L G Sbjct: 106 RLEAGDEIAISALEHHANLLPWQQLAHRRNLHLVVLPLDAHG 147
>PGK_NITEU (Q82XE8) Phosphoglycerate kinase (EC 2.7.2.3)| Length = 392 Score = 29.3 bits (64), Expect = 5.2 Identities = 20/64 (31%), Positives = 28/64 (43%) Frame = +3 Query: 267 RQNKSSHGWLQRFYCSPLPCVGLRFKSELPGRPIVKVLFQSEHPWFPVQMDGLHPNKLTV 446 R S+HG + +P+ C G+ EL + K L Q HP + KLTV Sbjct: 147 RAEASTHGIAKY---APIACAGILLTEELDA--LTKALHQPAHPLVAIVGGSKVSTKLTV 201 Query: 447 FQSL 458 +SL Sbjct: 202 LESL 205
>METX_YEAST (Q04533) Putative cystathionine gamma-synthase YML082W (EC| 2.5.1.48) (O-succinylhomoserine (thiol)-lyase) Length = 649 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/43 (39%), Positives = 19/43 (44%) Frame = -2 Query: 443 REFVRVKTVHLNGKPRVLTLKQDLHYWPTWELTFEPETDTWKR 315 RE+VR K H NGK R+L L E TWKR Sbjct: 90 REYVRRKCAHRNGKVRILQL--------ATAKPINEEQKTWKR 124 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,547,473 Number of Sequences: 219361 Number of extensions: 1371834 Number of successful extensions: 3399 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3332 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3399 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)