>WDR48_CHICK (Q5F3K4) WD-repeat protein 48|
          Length = 678

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 19/35 (54%), Positives = 25/35 (71%)
 Frame = -3

Query: 424 VEILCNNQVLSPEMSLATVRTYIWKKPEDLILNYR 320
           +E+LC +QVL P M L TV+ +IWK   DL L+YR
Sbjct: 640 IELLCQDQVLDPNMDLRTVKHFIWKSGGDLTLHYR 674

>WDR48_MACFA (Q4R2Z6) WD-repeat protein 48|
          Length = 622

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 19/35 (54%), Positives = 25/35 (71%)
 Frame = -3

Query: 424 VEILCNNQVLSPEMSLATVRTYIWKKPEDLILNYR 320
           +E+LC +QVL P M L TV+ +IWK   DL L+YR
Sbjct: 584 IELLCQDQVLDPNMDLRTVKHFIWKSGGDLTLHYR 618

>WDR48_MOUSE (Q8BH57) WD-repeat protein 48|
          Length = 676

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 19/35 (54%), Positives = 25/35 (71%)
 Frame = -3

Query: 424 VEILCNNQVLSPEMSLATVRTYIWKKPEDLILNYR 320
           +E+LC +QVL P M L TV+ +IWK   DL L+YR
Sbjct: 638 IELLCQDQVLDPNMDLRTVKHFIWKSGGDLTLHYR 672

>WDR48_PONPY (Q5RAW8) WD-repeat protein 48|
          Length = 677

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 19/35 (54%), Positives = 25/35 (71%)
 Frame = -3

Query: 424 VEILCNNQVLSPEMSLATVRTYIWKKPEDLILNYR 320
           +E+LC +QVL P M L TV+ +IWK   DL L+YR
Sbjct: 639 IELLCQDQVLDPNMDLRTVKHFIWKSGGDLTLHYR 673

>WDR48_HUMAN (Q8TAF3) WD-repeat protein 48 (WD repeat endosomal protein) (p80)|
          Length = 677

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 19/35 (54%), Positives = 25/35 (71%)
 Frame = -3

Query: 424 VEILCNNQVLSPEMSLATVRTYIWKKPEDLILNYR 320
           +E+LC +QVL P M L TV+ +IWK   DL L+YR
Sbjct: 639 IELLCQDQVLDPNMDLRTVKHFIWKSGGDLTLHYR 673

>YO087_YEAST (Q99247) WD-repeat protein YOL087C|
          Length = 1116

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
 Frame = -3

Query: 439  KLKPSV--EILCNNQVLSPEMSLATVRTYIWKKPEDLILNYR 320
            K++PS+  ++LC  QVL  +M+L TVRT  WK   D++L YR
Sbjct: 1057 KMEPSLWLDLLCRGQVLDNDMTLNTVRTLYWKSQGDIVLEYR 1098

>WDR48_BRARE (Q6PFM9) WD-repeat protein 48|
          Length = 677

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 17/35 (48%), Positives = 25/35 (71%)
 Frame = -3

Query: 424 VEILCNNQVLSPEMSLATVRTYIWKKPEDLILNYR 320
           +E++C +QVL P M L TV+ +IWK   DL ++YR
Sbjct: 639 IELMCLDQVLDPNMDLRTVKHFIWKSGGDLTIHYR 673

>YPR4_CAEEL (Q20059) Hypothetical WD-repeat protein F35G12.4|
          Length = 683

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 17/46 (36%), Positives = 30/46 (65%)
 Frame = -3

Query: 448 PWQKLKPSVEILCNNQVLSPEMSLATVRTYIWKKPEDLILNYRVVQ 311
           P  ++   +E+ CN+Q L P+M L TV+   WK+  +L+L+Y+ V+
Sbjct: 638 PLNQIHTKMEMYCNDQRLEPDMDLRTVKHLYWKQSGELLLHYKPVK 683

>YA4E_SCHPO (Q09731) Hypothetical WD-repeat protein C31A2.14 in chromosome I|
          Length = 962

 Score = 38.1 bits (87), Expect = 0.010
 Identities = 14/37 (37%), Positives = 27/37 (72%)
 Frame = -3

Query: 427  SVEILCNNQVLSPEMSLATVRTYIWKKPEDLILNYRV 317
            S++  C + V++P+M+LATV+  IW+  +D++ +Y V
Sbjct: 909  SLQFRCKDVVVTPKMTLATVKARIWRSGDDVVFHYDV 945

>GUAA_HAEDU (Q7VLE9) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 523

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 18/69 (26%), Positives = 32/69 (46%)
 Frame = +2

Query: 32  SRYTSLVAS*ALHLCYDTISLEAWRYKIHRKTLQRRN*VAVVLGTAPKSSTRVEHLHPIG 211
           S+YT L+A     +    +  E W + +  K ++  N   ++L   P+S+T     H   
Sbjct: 16  SQYTQLIARRIREI---GVYCELWAWDVTEKQIREFNPTGIILSGGPESTTETNSPHAPE 72

Query: 212 HMVIFKAAV 238
           +  +FKA V
Sbjct: 73  Y--VFKAGV 79

>CHLB_CYAPA (P48099) Light-independent protochlorophyllide reductase subunit B|
           (EC 1.18.-.-) (LI-POR subunit B) (DPOR subunit B)
          Length = 440

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
 Frame = +2

Query: 86  ISLEAWRYKIHRKTLQRRN*VAVVLGTAPKSSTRVEHLHP-IGHMVIFKAAVCNAEMLST 262
           I  EA + K+ RK        A++ G++   +T  + L   IG  +I     C +E  S 
Sbjct: 287 IKKEAIKSKLKRKK-------AIIFGSSNHVATLTKLLSKEIGLEIILCGTYCKSE--SK 337

Query: 263 YGEPNEQMYFRLQLS*LDHSVIKNQILRLLPNI 361
           +     Q Y    L   DH++I N+I +L P++
Sbjct: 338 WFSEQVQNYCNKILITEDHTMISNEISKLKPDV 370


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,170,489
Number of Sequences: 219361
Number of extensions: 1388157
Number of successful extensions: 2944
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2944
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)