ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl04e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT018078.1| Zea mays clone EL01N0551H06.c mRNA sequence 137 4e-29
2dbj|AK112045.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 5e-28
3dbj|AK111883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 5e-28
4gb|AY109830.1| Zea mays CL2951_1 mRNA sequence 115 1e-22
5gb|BT019122.1| Zea mays clone Contig734.F mRNA sequence 109 8e-21
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 90 7e-15
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 90 7e-15
8emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057... 90 7e-15
9dbj|AP004904.1| Lotus japonicus genomic DNA, chromosome 5, clone... 52 0.002
10gb|AC105179.6| Homo sapiens chromosome 11, clone RP11-124M12, co... 46 0.099
11gb|AC068329.8| Homo sapiens chromosome 11, clone RP11-82N10, com... 46 0.099
12gb|AC130801.16| Medicago truncatula clone mth2-12p19, complete s... 44 0.39
13emb|AL355805.20| Human DNA sequence from clone RP11-29L10 on chr... 44 0.39
14gb|AC122685.9| Homo sapiens 12 BAC RP11-165I14 (Roswell Park Can... 44 0.39
15gb|AC148345.3| Medicago truncatula chromosome 7 BAC clone mth2-1... 44 0.39
16gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome 42 1.5
17gb|BT013837.1| Lycopersicon esculentum clone 132794F, mRNA sequence 42 1.5
18gb|AC145725.2| Gasterosteus aculeatus clone CH213-173B10, comple... 42 1.5
19gb|AC013268.5| Homo sapiens BAC clone RP11-322F4 from 2, complet... 42 1.5
20gb|AC140479.3| Homo sapiens BAC clone RP11-1223D19 from 2, compl... 42 1.5
21gb|AC140490.3| Homo sapiens BAC clone RP11-335A19 from 2, comple... 42 1.5
22gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete ge... 42 1.5
23gb|AC121291.18| Mus musculus chromosome 5, clone RP23-170M15, co... 40 6.1
24gb|AC124429.4| Mus musculus BAC clone RP24-239N4 from chromosome... 40 6.1
25gb|AC146195.3| Pan troglodytes BAC clone RP43-25F5 from 7, compl... 40 6.1
26gb|AC099798.4| Homo sapiens BAC clone RP11-559E21 from 7, comple... 40 6.1
27emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 6.1
28gb|AC166092.4| Glycine max clone gmw1-93l19, complete sequence 40 6.1
29gb|AC090071.3| Homo sapiens chromosome 5 clone CTD-2538A21, comp... 40 6.1
30gb|AC087721.4| Homo sapiens chromosome 15 clone RP11-16O9 map 15... 40 6.1
31gb|AC011712.6|AC011712 Homo sapiens chromosome 18, clone RP11-18... 40 6.1
32dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
33gb|AC073181.8|AC073181 Homo sapiens clone RP13-493F23, complete ... 40 6.1
34gb|AC154705.2| Mus musculus BAC clone RP23-131F11 from chromosom... 40 6.1
35dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
36emb|BX248318.9| Zebrafish DNA sequence from clone CH211-220M17 i... 40 6.1
37dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 6.1
38dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1 
>gb|BT018078.1| Zea mays clone EL01N0551H06.c mRNA sequence
          Length = 656

 Score =  137 bits (69), Expect = 4e-29
 Identities = 102/113 (90%)
 Strand = Plus / Minus

                                                                       
Query: 311 ttggaccactctgtaattaagaatcaaatcctccggcttcttccaaatatatgtccgcac 370
           ||||||||||||||||| |||||||||||| || ||||| ||||| |||||||| |||||
Sbjct: 220 ttggaccactctgtaatgaagaatcaaatcttctggctttttccatatatatgttcgcac 161

                                                                
Query: 371 cgttgccaaactcatctcaggtgacagaacctggttgttgcacaatatctcaa 423
            || |||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 160 agtagccaaactcatctctggtgatagaacctggttattgcacaatatctcaa 108
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>dbj|AK112045.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C06, full
            insert sequence
          Length = 1551

 Score =  133 bits (67), Expect = 5e-28
 Identities = 136/159 (85%)
 Strand = Plus / Minus

                                                                        
Query: 295  gttgcaattatcttgattggaccactctgtaattaagaatcaaatcctccggcttcttcc 354
            |||||||| ||||||| ||||||||| |||| ||||||||||||||||| ||||||||||
Sbjct: 1167 gttgcaatcatcttgactggaccactttgtagttaagaatcaaatcctctggcttcttcc 1108

                                                                        
Query: 355  aaatatatgtccgcaccgttgccaaactcatctcaggtgacagaacctggttgttgcaca 414
            | | ||| | |||||| || ||||| ||||| || |||| || ||||||| |||| ||||
Sbjct: 1107 agacataagcccgcactgtggccaagctcatttcgggtgccaaaacctggctgttacaca 1048

                                                   
Query: 415  atatctcaactgaaggtttcagcttttgccatggcttta 453
            ||||||| || ||||||||||  ||||||||||| ||||
Sbjct: 1047 atatctctacagaaggtttcaatttttgccatggtttta 1009



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 50/58 (86%), Gaps = 2/58 (3%)
 Strand = Plus / Minus

                                                                      
Query: 25   ccaaatctctagatatacaagcctggtagccagctgag--cattacacctgtgctatg 80
            ||||||| ||| || ||||||| ||||||||||  |||  ||||||||||||||||||
Sbjct: 1437 ccaaatccctaaatttacaagcttggtagccagaagagatcattacacctgtgctatg 1380
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>dbj|AK111883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060M06, full
            insert sequence
          Length = 2847

 Score =  133 bits (67), Expect = 5e-28
 Identities = 136/159 (85%)
 Strand = Plus / Minus

                                                                        
Query: 295  gttgcaattatcttgattggaccactctgtaattaagaatcaaatcctccggcttcttcc 354
            |||||||| ||||||| ||||||||| |||| ||||||||||||||||| ||||||||||
Sbjct: 2434 gttgcaatcatcttgactggaccactttgtagttaagaatcaaatcctctggcttcttcc 2375

                                                                        
Query: 355  aaatatatgtccgcaccgttgccaaactcatctcaggtgacagaacctggttgttgcaca 414
            | | ||| | |||||| || ||||| ||||| || |||| || ||||||| |||| ||||
Sbjct: 2374 agacataagcccgcactgtggccaagctcatttcgggtgccaaaacctggctgttacaca 2315

                                                   
Query: 415  atatctcaactgaaggtttcagcttttgccatggcttta 453
            ||||||| || ||||||||||  ||||||||||| ||||
Sbjct: 2314 atatctctacagaaggtttcaatttttgccatggtttta 2276



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 50/58 (86%), Gaps = 2/58 (3%)
 Strand = Plus / Minus

                                                                      
Query: 25   ccaaatctctagatatacaagcctggtagccagctgag--cattacacctgtgctatg 80
            ||||||| ||| || ||||||| ||||||||||  |||  ||||||||||||||||||
Sbjct: 2704 ccaaatccctaaatttacaagcttggtagccagtagagatcattacacctgtgctatg 2647
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>gb|AY109830.1| Zea mays CL2951_1 mRNA sequence
          Length = 989

 Score =  115 bits (58), Expect = 1e-22
 Identities = 98/113 (86%)
 Strand = Plus / Plus

                                                                       
Query: 311 ttggaccactctgtaattaagaatcaaatcctccggcttcttccaaatatatgtccgcac 370
           ||||||||||||||||| |||||||||||| || |||     ||| |||||||| |||||
Sbjct: 431 ttggaccactctgtaatgaagaatcaaatcttctggcnnnnnccatatatatgttcgcac 490

                                                                
Query: 371 cgttgccaaactcatctcaggtgacagaacctggttgttgcacaatatctcaa 423
            || |||||||||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct: 491 agtagccaaactcatctctggtgatagaacctggttattgcacaatatctcaa 543
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>gb|BT019122.1| Zea mays clone Contig734.F mRNA sequence
          Length = 942

 Score =  109 bits (55), Expect = 8e-21
 Identities = 88/99 (88%)
 Strand = Plus / Minus

                                                                       
Query: 304 atcttgattggaccactctgtaattaagaatcaaatcctccggcttcttccaaatatatg 363
           |||| |||||||||||||| |||| |||||||||||| |||||||||||||| |||||||
Sbjct: 259 atctcgattggaccactctataatgaagaatcaaatcttccggcttcttccatatatatg 200

                                                  
Query: 364 tccgcaccgttgccaaactcatctcaggtgacagaacct 402
           | ||||| || |||||||||||||| || || |||||||
Sbjct: 199 ttcgcacggtagccaaactcatctctggggatagaacct 161
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 93/109 (85%)
 Strand = Plus / Plus

                                                                           
Query: 295     gttgcaattatcttgattggaccactctgtaattaagaatcaaatcctccggcttcttcc 354
               |||||||| ||||||| ||||||||| |||| ||||||||||||||||| ||||||||||
Sbjct: 3304734 gttgcaatcatcttgactggaccactttgtagttaagaatcaaatcctctggcttcttcc 3304793

                                                                
Query: 355     aaatatatgtccgcaccgttgccaaactcatctcaggtgacagaacctg 403
               | | ||| | |||||| || ||||| ||||| || |||| || ||||||
Sbjct: 3304794 agacataagcccgcactgtggccaagctcatttcgggtgccaaaacctg 3304842



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                     
Query: 400     cctggttgttgcacaatatctcaactgaaggtttcagcttttgccatggcttta 453
               ||||| |||| ||||||||||| || ||||||||||  ||||||||||| ||||
Sbjct: 3305582 cctggctgttacacaatatctctacagaaggtttcaatttttgccatggtttta 3305635



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 50/58 (86%), Gaps = 2/58 (3%)
 Strand = Plus / Plus

                                                                         
Query: 25      ccaaatctctagatatacaagcctggtagccagctgag--cattacacctgtgctatg 80
               ||||||| ||| || ||||||| ||||||||||  |||  ||||||||||||||||||
Sbjct: 3304464 ccaaatccctaaatttacaagcttggtagccagaagagatcattacacctgtgctatg 3304521
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 93/109 (85%)
 Strand = Plus / Plus

                                                                           
Query: 295     gttgcaattatcttgattggaccactctgtaattaagaatcaaatcctccggcttcttcc 354
               |||||||| ||||||| ||||||||| |||| ||||||||||||||||| ||||||||||
Sbjct: 3304679 gttgcaatcatcttgactggaccactttgtagttaagaatcaaatcctctggcttcttcc 3304738

                                                                
Query: 355     aaatatatgtccgcaccgttgccaaactcatctcaggtgacagaacctg 403
               | | ||| | |||||| || ||||| ||||| || |||| || ||||||
Sbjct: 3304739 agacataagcccgcactgtggccaagctcatttcgggtgccaaaacctg 3304787



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                     
Query: 400     cctggttgttgcacaatatctcaactgaaggtttcagcttttgccatggcttta 453
               ||||| |||| ||||||||||| || ||||||||||  ||||||||||| ||||
Sbjct: 3305527 cctggctgttacacaatatctctacagaaggtttcaatttttgccatggtttta 3305580



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 50/58 (86%), Gaps = 2/58 (3%)
 Strand = Plus / Plus

                                                                         
Query: 25      ccaaatctctagatatacaagcctggtagccagctgag--cattacacctgtgctatg 80
               ||||||| ||| || ||||||| ||||||||||  |||  ||||||||||||||||||
Sbjct: 3304409 ccaaatccctaaatttacaagcttggtagccagaagagatcattacacctgtgctatg 3304466
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>emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057_G11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109081

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 93/109 (85%)
 Strand = Plus / Plus

                                                                         
Query: 295   gttgcaattatcttgattggaccactctgtaattaagaatcaaatcctccggcttcttcc 354
             |||||||| ||||||| ||||||||| |||| ||||||||||||||||| ||||||||||
Sbjct: 95120 gttgcaatcatcttgactggaccactttgtagttaagaatcaaatcctctggcttcttcc 95179

                                                              
Query: 355   aaatatatgtccgcaccgttgccaaactcatctcaggtgacagaacctg 403
             | | ||| | |||||| || ||||| ||||| || |||| || ||||||
Sbjct: 95180 agacataagcccgcactgtggccaagctcatttcgggtgccaaaacctg 95228



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                   
Query: 400   cctggttgttgcacaatatctcaactgaaggtttcagcttttgccatggcttta 453
             ||||| |||| ||||||||||| || ||||||||||  ||||||||||| ||||
Sbjct: 95968 cctggctgttacacaatatctctacagaaggtttcaatttttgccatggtttta 96021



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 50/58 (86%), Gaps = 2/58 (3%)
 Strand = Plus / Plus

                                                                       
Query: 25    ccaaatctctagatatacaagcctggtagccagctgag--cattacacctgtgctatg 80
             ||||||| ||| || ||||||| ||||||||||  |||  ||||||||||||||||||
Sbjct: 94850 ccaaatccctaaatttacaagcttggtagccagaagagatcattacacctgtgctatg 94907
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>dbj|AP004904.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT10C05, TM0062,
             complete sequence
          Length = 81367

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 400   cctggttgttgcacaatatctcaactgaaggtttcagcttttgcca 445
             ||||||||||||||||||||||||  |||||| | | |||||||||
Sbjct: 52527 cctggttgttgcacaatatctcaatagaaggtctaatcttttgcca 52482
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>gb|AC105179.6| Homo sapiens chromosome 11, clone RP11-124M12, complete sequence
          Length = 171683

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 117   atagaaaaactttacagaggagg 139
             |||||||||||||||||||||||
Sbjct: 13392 atagaaaaactttacagaggagg 13414
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>gb|AC068329.8| Homo sapiens chromosome 11, clone RP11-82N10, complete sequence
          Length = 185347

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 117    atagaaaaactttacagaggagg 139
              |||||||||||||||||||||||
Sbjct: 152156 atagaaaaactttacagaggagg 152178
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>gb|AC130801.16| Medicago truncatula clone mth2-12p19, complete sequence
          Length = 119328

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 410  gcacaatatctcaactgaaggtttcagcttttgccatggctt 451
            ||||||||| |||| ||||||| | ||||||||||| |||||
Sbjct: 2896 gcacaatatttcaattgaaggtctaagcttttgccaaggctt 2855
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>emb|AL355805.20| Human DNA sequence from clone RP11-29L10 on chromosome Xq21.1-21.33
             Contains a ribosomal protein L6 (RPL6) pseudogene,
             complete sequence
          Length = 76507

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 77    tatgatacaatctcactagaagcctg 102
             ||||||||||||||||| ||||||||
Sbjct: 32914 tatgatacaatctcactggaagcctg 32889
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>gb|AC122685.9| Homo sapiens 12 BAC RP11-165I14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 106673

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 129   tacagaggaggaattaagttgctgta 154
             ||||||||||||||||| ||||||||
Sbjct: 18928 tacagaggaggaattaaattgctgta 18903
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>gb|AC148345.3| Medicago truncatula chromosome 7 BAC clone mth2-14a16, complete
            sequence
          Length = 105328

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 410  gcacaatatctcaactgaaggtttcagcttttgccatggctt 451
            ||||||||| |||| ||||||| | ||||||||||| |||||
Sbjct: 1874 gcacaatatttcaattgaaggtctaagcttttgccaaggctt 1915
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>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome
          Length = 1796226

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 6       atttgctttattgagaaatccaaatctct 34
               ||||| || ||||||||||||||||||||
Sbjct: 1425072 atttgattaattgagaaatccaaatctct 1425100
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>gb|BT013837.1| Lycopersicon esculentum clone 132794F, mRNA sequence
          Length = 3116

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 399  acctggttgttgcacaatatctcaactgaaggtttcagcttttgccatggctt 451
            ||||||||  ||||||||||||| |  || ||||| ||||||||||| |||||
Sbjct: 2417 acctggttactgcacaatatctctatggatggtttaagcttttgccaaggctt 2365
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>gb|AC145725.2| Gasterosteus aculeatus clone CH213-173B10, complete sequence
          Length = 158904

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 223    cttcaaagctgccgtctgcaa 243
              |||||||||||||||||||||
Sbjct: 101257 cttcaaagctgccgtctgcaa 101237
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>gb|AC013268.5| Homo sapiens BAC clone RP11-322F4 from 2, complete sequence
          Length = 206457

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 121    aaaaactttacagaggaggaa 141
              |||||||||||||||||||||
Sbjct: 156606 aaaaactttacagaggaggaa 156586
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>gb|AC140479.3| Homo sapiens BAC clone RP11-1223D19 from 2, complete sequence
          Length = 227230

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    aaaaactttacagaggaggaa 141
              |||||||||||||||||||||
Sbjct: 140492 aaaaactttacagaggaggaa 140512
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>gb|AC140490.3| Homo sapiens BAC clone RP11-335A19 from 2, complete sequence
          Length = 215819

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   aaaaactttacagaggaggaa 141
             |||||||||||||||||||||
Sbjct: 87265 aaaaactttacagaggaggaa 87245
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>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome
          Length = 1796846

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 6       atttgctttattgagaaatccaaatctct 34
               ||||| || ||||||||||||||||||||
Sbjct: 1417430 atttgattaattgagaaatccaaatctct 1417458
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>gb|AC121291.18| Mus musculus chromosome 5, clone RP23-170M15, complete sequence
          Length = 192717

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 236    gtctgcaatgcagaaatgct 255
              ||||||||||||||||||||
Sbjct: 121649 gtctgcaatgcagaaatgct 121668
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>gb|AC124429.4| Mus musculus BAC clone RP24-239N4 from chromosome 13, complete sequence
          Length = 168858

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 179   agcacaagagtggaacacttgcatccta 206
             |||||||||||||| | |||||||||||
Sbjct: 93998 agcacaagagtggagctcttgcatccta 94025
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>gb|AC146195.3| Pan troglodytes BAC clone RP43-25F5 from 7, complete sequence
          Length = 170968

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     catttgctttattgagaaat 24
             ||||||||||||||||||||
Sbjct: 97308 catttgctttattgagaaat 97289
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>gb|AC099798.4| Homo sapiens BAC clone RP11-559E21 from 7, complete sequence
          Length = 131328

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     catttgctttattgagaaat 24
             ||||||||||||||||||||
Sbjct: 99146 catttgctttattgagaaat 99127
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 433     tcagcttttgccatggcttt 452
               ||||||||||||||||||||
Sbjct: 1829511 tcagcttttgccatggcttt 1829530
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>gb|AC166092.4| Glycine max clone gmw1-93l19, complete sequence
          Length = 51037

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 114   ttcatagaaaaactttacagagga 137
             ||||||| ||||||||||||||||
Sbjct: 36649 ttcataggaaaactttacagagga 36672
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>gb|AC090071.3| Homo sapiens chromosome 5 clone CTD-2538A21, complete sequence
          Length = 197810

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   tgcacaatatctcaactgaa 428
             ||||||||||||||||||||
Sbjct: 59295 tgcacaatatctcaactgaa 59314
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>gb|AC087721.4| Homo sapiens chromosome 15 clone RP11-16O9 map 15q15, complete sequence
          Length = 196603

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    attcatagaaaaactttaca 132
              ||||||||||||||||||||
Sbjct: 105551 attcatagaaaaactttaca 105532
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>gb|AC011712.6|AC011712 Homo sapiens chromosome 18, clone RP11-188I24, complete sequence
          Length = 145165

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 433   tcagcttttgccatggcttt 452
             ||||||||||||||||||||
Sbjct: 53567 tcagcttttgccatggcttt 53548
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 369      accgttgccaaactcatctcaggt 392
                ||||| ||||||||||||||||||
Sbjct: 31373325 accgtggccaaactcatctcaggt 31373302
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>gb|AC073181.8|AC073181 Homo sapiens clone RP13-493F23, complete sequence
          Length = 105036

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     catttgctttattgagaaat 24
             ||||||||||||||||||||
Sbjct: 21076 catttgctttattgagaaat 21095
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>gb|AC154705.2| Mus musculus BAC clone RP23-131F11 from chromosome 16, complete
             sequence
          Length = 177886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   tataggtcatatggttatct 224
             ||||||||||||||||||||
Sbjct: 54004 tataggtcatatggttatct 54023
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>dbj|AP005733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0024K03
          Length = 119796

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 369   accgttgccaaactcatctcaggt 392
             ||||| ||||||||||||||||||
Sbjct: 55899 accgtggccaaactcatctcaggt 55876
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>emb|BX248318.9| Zebrafish DNA sequence from clone CH211-220M17 in linkage group 11,
             complete sequence
          Length = 194209

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 434   cagcttttgccatggcttta 453
             ||||||||||||||||||||
Sbjct: 23964 cagcttttgccatggcttta 23983
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 433     tcagcttttgccatggcttt 452
               ||||||||||||||||||||
Sbjct: 1809752 tcagcttttgccatggcttt 1809771
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>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBa0078N11
          Length = 155168

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 369  accgttgccaaactcatctcaggt 392
            ||||| ||||||||||||||||||
Sbjct: 8722 accgtggccaaactcatctcaggt 8699


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,498,674
Number of Sequences: 3902068
Number of extensions: 4498674
Number of successful extensions: 81500
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81227
Number of HSP's gapped (non-prelim): 273
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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