ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl04d06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196516.1| Oryza sativa (japonica cultivar-group) putative calcium-transporting ATPase (OSJNBa0061K21.21), mRNA Length = 3108 Score = 246 bits (124), Expect = 5e-62 Identities = 223/256 (87%) Strand = Plus / Minus Query: 135 tccggcacggggatgaacttgacggcccagccgatgggccacgacacggcggcgatggcg 194 |||||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 3053 tccggcaccgggatgcacttgacggcccacccgatgggccacgacacggcggcaatgccg 2994 Query: 195 aggcagacgccccactgccccagtcccagcctcttggtgccggcgaacctggtgagcacc 254 | |||| |||||||||||||| |||||||||| || ||||||||| |||| |||| | Sbjct: 2993 acgcaggcgccccactgcccccaccccagcctctccgttccggcgaacttggtcagcaac 2934 Query: 255 tccaccatgaccacctgcaggacgagcgtgacggcgatgatggccaggaacatcctgttc 314 |||||||| ||||||||||| | | ||||||||||| |||| ||||||||||||||||| Sbjct: 2933 tccaccatcaccacctgcagcgccaccgtgacggcgacgatgcccaggaacatcctgttc 2874 Query: 315 ttgagcaccccggcgaacacgttcttcttctcgatgtcgcgcgcgttgaactcgttgaac 374 | |||| ||||||||||||||| || ||||||| || | ||||||||||||||||||| Sbjct: 2873 cggtgcacgccggcgaacacgttcctcctctcgatctccctcgcgttgaactcgttgaac 2814 Query: 375 acctggcagagcacga 390 |||||||| ||||||| Sbjct: 2813 acctggcacagcacga 2798
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 246 bits (124), Expect = 5e-62 Identities = 223/256 (87%) Strand = Plus / Plus Query: 135 tccggcacggggatgaacttgacggcccagccgatgggccacgacacggcggcgatggcg 194 |||||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 107535 tccggcaccgggatgcacttgacggcccacccgatgggccacgacacggcggcaatgccg 107594 Query: 195 aggcagacgccccactgccccagtcccagcctcttggtgccggcgaacctggtgagcacc 254 | |||| |||||||||||||| |||||||||| || ||||||||| |||| |||| | Sbjct: 107595 acgcaggcgccccactgcccccaccccagcctctccgttccggcgaacttggtcagcaac 107654 Query: 255 tccaccatgaccacctgcaggacgagcgtgacggcgatgatggccaggaacatcctgttc 314 |||||||| ||||||||||| | | ||||||||||| |||| ||||||||||||||||| Sbjct: 107655 tccaccatcaccacctgcagcgccaccgtgacggcgacgatgcccaggaacatcctgttc 107714 Query: 315 ttgagcaccccggcgaacacgttcttcttctcgatgtcgcgcgcgttgaactcgttgaac 374 | |||| ||||||||||||||| || ||||||| || | ||||||||||||||||||| Sbjct: 107715 cggtgcacgccggcgaacacgttcctcctctcgatctccctcgcgttgaactcgttgaac 107774 Query: 375 acctggcagagcacga 390 |||||||| ||||||| Sbjct: 107775 acctggcacagcacga 107790
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 246 bits (124), Expect = 5e-62 Identities = 223/256 (87%) Strand = Plus / Plus Query: 135 tccggcacggggatgaacttgacggcccagccgatgggccacgacacggcggcgatggcg 194 |||||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 14168007 tccggcaccgggatgcacttgacggcccacccgatgggccacgacacggcggcaatgccg 14168066 Query: 195 aggcagacgccccactgccccagtcccagcctcttggtgccggcgaacctggtgagcacc 254 | |||| |||||||||||||| |||||||||| || ||||||||| |||| |||| | Sbjct: 14168067 acgcaggcgccccactgcccccaccccagcctctccgttccggcgaacttggtcagcaac 14168126 Query: 255 tccaccatgaccacctgcaggacgagcgtgacggcgatgatggccaggaacatcctgttc 314 |||||||| ||||||||||| | | ||||||||||| |||| ||||||||||||||||| Sbjct: 14168127 tccaccatcaccacctgcagcgccaccgtgacggcgacgatgcccaggaacatcctgttc 14168186 Query: 315 ttgagcaccccggcgaacacgttcttcttctcgatgtcgcgcgcgttgaactcgttgaac 374 | |||| ||||||||||||||| || ||||||| || | ||||||||||||||||||| Sbjct: 14168187 cggtgcacgccggcgaacacgttcctcctctcgatctccctcgcgttgaactcgttgaac 14168246 Query: 375 acctggcagagcacga 390 |||||||| ||||||| Sbjct: 14168247 acctggcacagcacga 14168262
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 246 bits (124), Expect = 5e-62 Identities = 223/256 (87%) Strand = Plus / Plus Query: 135 tccggcacggggatgaacttgacggcccagccgatgggccacgacacggcggcgatggcg 194 |||||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 40080 tccggcaccgggatgcacttgacggcccacccgatgggccacgacacggcggcaatgccg 40139 Query: 195 aggcagacgccccactgccccagtcccagcctcttggtgccggcgaacctggtgagcacc 254 | |||| |||||||||||||| |||||||||| || ||||||||| |||| |||| | Sbjct: 40140 acgcaggcgccccactgcccccaccccagcctctccgttccggcgaacttggtcagcaac 40199 Query: 255 tccaccatgaccacctgcaggacgagcgtgacggcgatgatggccaggaacatcctgttc 314 |||||||| ||||||||||| | | ||||||||||| |||| ||||||||||||||||| Sbjct: 40200 tccaccatcaccacctgcagcgccaccgtgacggcgacgatgcccaggaacatcctgttc 40259 Query: 315 ttgagcaccccggcgaacacgttcttcttctcgatgtcgcgcgcgttgaactcgttgaac 374 | |||| ||||||||||||||| || ||||||| || | ||||||||||||||||||| Sbjct: 40260 cggtgcacgccggcgaacacgttcctcctctcgatctccctcgcgttgaactcgttgaac 40319 Query: 375 acctggcagagcacga 390 |||||||| ||||||| Sbjct: 40320 acctggcacagcacga 40335
>dbj|AK109037.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-C10, full insert sequence Length = 1503 Score = 246 bits (124), Expect = 5e-62 Identities = 223/256 (87%) Strand = Plus / Minus Query: 135 tccggcacggggatgaacttgacggcccagccgatgggccacgacacggcggcgatggcg 194 |||||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 1322 tccggcaccgggatgcacttgacggcccacccgatgggccacgacacggcggcaatgccg 1263 Query: 195 aggcagacgccccactgccccagtcccagcctcttggtgccggcgaacctggtgagcacc 254 | |||| |||||||||||||| |||||||||| || ||||||||| |||| |||| | Sbjct: 1262 acgcaggcgccccactgcccccaccccagcctctccgttccggcgaacttggtcagcaac 1203 Query: 255 tccaccatgaccacctgcaggacgagcgtgacggcgatgatggccaggaacatcctgttc 314 |||||||| ||||||||||| | | ||||||||||| |||| ||||||||||||||||| Sbjct: 1202 tccaccatcaccacctgcagcgccaccgtgacggcgacgatgcccaggaacatcctgttc 1143 Query: 315 ttgagcaccccggcgaacacgttcttcttctcgatgtcgcgcgcgttgaactcgttgaac 374 | |||| ||||||||||||||| || ||||||| || | ||||||||||||||||||| Sbjct: 1142 cggtgcacgccggcgaacacgttcctcctctcgatctccctcgcgttgaactcgttgaac 1083 Query: 375 acctggcagagcacga 390 |||||||| ||||||| Sbjct: 1082 acctggcacagcacga 1067
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 246 bits (124), Expect = 5e-62 Identities = 223/256 (87%) Strand = Plus / Plus Query: 135 tccggcacggggatgaacttgacggcccagccgatgggccacgacacggcggcgatggcg 194 |||||||| |||||| ||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 14176249 tccggcaccgggatgcacttgacggcccacccgatgggccacgacacggcggcaatgccg 14176308 Query: 195 aggcagacgccccactgccccagtcccagcctcttggtgccggcgaacctggtgagcacc 254 | |||| |||||||||||||| |||||||||| || ||||||||| |||| |||| | Sbjct: 14176309 acgcaggcgccccactgcccccaccccagcctctccgttccggcgaacttggtcagcaac 14176368 Query: 255 tccaccatgaccacctgcaggacgagcgtgacggcgatgatggccaggaacatcctgttc 314 |||||||| ||||||||||| | | ||||||||||| |||| ||||||||||||||||| Sbjct: 14176369 tccaccatcaccacctgcagcgccaccgtgacggcgacgatgcccaggaacatcctgttc 14176428 Query: 315 ttgagcaccccggcgaacacgttcttcttctcgatgtcgcgcgcgttgaactcgttgaac 374 | |||| ||||||||||||||| || ||||||| || | ||||||||||||||||||| Sbjct: 14176429 cggtgcacgccggcgaacacgttcctcctctcgatctccctcgcgttgaactcgttgaac 14176488 Query: 375 acctggcagagcacga 390 |||||||| ||||||| Sbjct: 14176489 acctggcacagcacga 14176504
>ref|XM_474166.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 cggcggcgatggcgaggcagacg 203 ||||||||||||||||||||||| Sbjct: 17 cggcggcgatggcgaggcagacg 39
>emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F16, complete sequence Length = 119535 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 cggcggcgatggcgaggcagacg 203 ||||||||||||||||||||||| Sbjct: 74398 cggcggcgatggcgaggcagacg 74420
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 cggcggcgatggcgaggcagacg 203 ||||||||||||||||||||||| Sbjct: 33428519 cggcggcgatggcgaggcagacg 33428541
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.084 Identities = 26/27 (96%) Strand = Plus / Minus Query: 355 gcgcgttgaactcgttgaacacctggc 381 ||||||| ||||||||||||||||||| Sbjct: 4653824 gcgcgttcaactcgttgaacacctggc 4653798
>dbj|AK099088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007N04, full insert sequence Length = 1537 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 cggcggcgatggcgaggcagacg 203 ||||||||||||||||||||||| Sbjct: 114 cggcggcgatggcgaggcagacg 136
>dbj|AK062107.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B03, full insert sequence Length = 1532 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 cggcggcgatggcgaggcagacg 203 ||||||||||||||||||||||| Sbjct: 136 cggcggcgatggcgaggcagacg 158
>dbj|AB095022.1| Oryza sativa (japonica cultivar-group) Jab1 gene for JUN-activation-domain-binding protein 1, complete cds Length = 4180 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 cggcggcgatggcgaggcagacg 203 ||||||||||||||||||||||| Sbjct: 588 cggcggcgatggcgaggcagacg 610
>gb|AF072849.1|AF072849 Oryza sativa subsp. indica jab1 protein (jab1) mRNA, complete cds Length = 1379 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 cggcggcgatggcgaggcagacg 203 ||||||||||||||||||||||| Sbjct: 89 cggcggcgatggcgaggcagacg 111
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 cggcggcgatggcgaggcagacg 203 ||||||||||||||||||||||| Sbjct: 4708 cggcggcgatggcgaggcagacg 4730
>dbj|AB055495.1| Oryza sativa Jab1 mRNA for JUN-activation-domain-binding protein homolog, complete cds Length = 1267 Score = 46.1 bits (23), Expect = 0.084 Identities = 23/23 (100%) Strand = Plus / Plus Query: 181 cggcggcgatggcgaggcagacg 203 ||||||||||||||||||||||| Sbjct: 61 cggcggcgatggcgaggcagacg 83
>gb|BT016266.1| Zea mays clone Contig99 mRNA sequence Length = 885 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 360 ttgaactcgttgaacacctggcagag 385 ||||| |||||||||||||||||||| Sbjct: 336 ttgaattcgttgaacacctggcagag 311
>gb|AC135048.2| Homo sapiens chromosome 16 clone RP11-1072A3, complete sequence Length = 177719 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 250 gcacctccaccatgaccacctgcagg 275 |||||||||||||| ||||||||||| Sbjct: 53527 gcacctccaccatggccacctgcagg 53552
>gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, complete sequence Length = 182230 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 250 gcacctccaccatgaccacctgcagg 275 |||||||||||||| ||||||||||| Sbjct: 9082 gcacctccaccatggccacctgcagg 9057
>gb|AY111685.1| Zea mays CL36308_1 mRNA sequence Length = 628 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 360 ttgaactcgttgaacacctggcagag 385 ||||| |||||||||||||||||||| Sbjct: 525 ttgaattcgttgaacacctggcagag 550
>ref|NM_119136.2| Arabidopsis thaliana ACA10; calcium-transporting ATPase/ calmodulin binding AT4G29900 (ACA10) mRNA, complete cds Length = 3552 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 360 ttgaactcgttgaacacctggcaga 384 |||||||||||||| |||||||||| Sbjct: 2927 ttgaactcgttgaatacctggcaga 2903
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 ccggcgaacctggtgagcacc 254 ||||||||||||||||||||| Sbjct: 2492354 ccggcgaacctggtgagcacc 2492374
>ref|NM_113191.1| Arabidopsis thaliana calcium-transporting ATPase/ calmodulin binding AT3G22910 mRNA, complete cds Length = 3054 Score = 40.1 bits (20), Expect = 5.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 357 gcgttgaactcgttgaacacctggcagagcac 388 ||||| ||||||||||||||||| || ||||| Sbjct: 2789 gcgttaaactcgttgaacacctgacaaagcac 2758
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ccggcgaacacgttcttctt 343 |||||||||||||||||||| Sbjct: 651853 ccggcgaacacgttcttctt 651834
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 ggacgagcgtgacggcgatg 293 |||||||||||||||||||| Sbjct: 1480204 ggacgagcgtgacggcgatg 1480223
>gb|AE009107.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 133 of 256 of the complete sequence Length = 12377 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 agcgtgacggcgatgatggc 298 |||||||||||||||||||| Sbjct: 6092 agcgtgacggcgatgatggc 6111
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 ctcgttgaacacctggcaga 384 |||||||||||||||||||| Sbjct: 974752 ctcgttgaacacctggcaga 974733
>gb|AC091623.2| Sus scrofa clone RP44-183E24, complete sequence Length = 200062 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 gcacctccaccatgaccacctgca 273 |||||||||||||| ||||||||| Sbjct: 156996 gcacctccaccatggccacctgca 157019
>ref|XM_790714.1| PREDICTED: Strongylocentrotus purpuratus similar to Dentin sialophosphoprotein precursor (Dentin matrix protein-3) (DMP-3) (LOC591134), partial mRNA Length = 6263 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 tgcatgcagcatgaactggg 88 |||||||||||||||||||| Sbjct: 5623 tgcatgcagcatgaactggg 5604
>emb|AJ310840.1|HVU310840 Hordeum vulgare partial CA1 gene for P-type ATPase Length = 1686 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 ctcgttgaacacctggcaga 384 |||||||||||||||||||| Sbjct: 1449 ctcgttgaacacctggcaga 1430
>gb|BT024957.1| Drosophila melanogaster IP15602 full insert cDNA Length = 1190 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 agcacctccaccatgaccac 268 |||||||||||||||||||| Sbjct: 148 agcacctccaccatgaccac 167
>gb|DQ149577.1| Paracoccus pantotrophus transposon TnPpa1, complete sequence Length = 44286 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 gcggcgatggcgaggcagac 202 |||||||||||||||||||| Sbjct: 14955 gcggcgatggcgaggcagac 14936
>ref|NM_164504.1| Drosophila melanogaster CG3119-RB, transcript variant B (CG3119), mRNA Length = 660 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 agcacctccaccatgaccac 268 |||||||||||||||||||| Sbjct: 170 agcacctccaccatgaccac 189
>ref|NM_134873.1| Drosophila melanogaster CG3119-RA, transcript variant A (CG3119), mRNA Length = 1111 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 agcacctccaccatgaccac 268 |||||||||||||||||||| Sbjct: 170 agcacctccaccatgaccac 189
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 agcgtgacggcgatgatggc 298 |||||||||||||||||||| Sbjct: 1470465 agcgtgacggcgatgatggc 1470484
>gb|AC009392.6| Drosophila melanogaster, chromosome 2L, region 23A-23E, BAC clone BACR42J13, complete sequence Length = 179125 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 agcacctccaccatgaccac 268 |||||||||||||||||||| Sbjct: 113503 agcacctccaccatgaccac 113484
>gb|AC157661.2| Mus musculus BAC clone RP23-233F23 from chromosome 3, complete sequence Length = 195603 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 accatgaccacctgcaggac 277 |||||||||||||||||||| Sbjct: 94188 accatgaccacctgcaggac 94169
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aaagaattattcgcaagtga 25 |||||||||||||||||||| Sbjct: 2167844 aaagaattattcgcaagtga 2167825
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ggcgaacacgttcttcttct 345 |||||||||||||||||||| Sbjct: 1108923 ggcgaacacgttcttcttct 1108904
>dbj|AP001300.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F5N5 Length = 71327 Score = 40.1 bits (20), Expect = 5.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 357 gcgttgaactcgttgaacacctggcagagcac 388 ||||| ||||||||||||||||| || ||||| Sbjct: 28541 gcgttaaactcgttgaacacctgacaaagcac 28572
>gb|AC004120.2|AC004120 Drosophila melanogaster, chromosome 2L, region 23B2-23C1, P1 clone DS07149, complete sequence Length = 40710 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 agcacctccaccatgaccac 268 |||||||||||||||||||| Sbjct: 9015 agcacctccaccatgaccac 9034
>gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10 of 83 of the complete sequence Length = 314957 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 agcacctccaccatgaccac 268 |||||||||||||||||||| Sbjct: 7906 agcacctccaccatgaccac 7887
>gb|AC100406.7| Mus musculus chromosome 9, clone RP23-134M7, complete sequence Length = 183837 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gaatatgaacactgcatgca 76 |||||||||||||||||||| Sbjct: 156991 gaatatgaacactgcatgca 156972
>emb|CT033751.4| Mouse DNA sequence from clone RP24-236O3 on chromosome 17, complete sequence Length = 171391 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 cccactgccccagtcccagc 224 |||||||||||||||||||| Sbjct: 61508 cccactgccccagtcccagc 61489
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 cgagcgtgacggcgatgatg 296 |||||||||||||||||||| Sbjct: 2654450 cgagcgtgacggcgatgatg 2654431
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aaagaattattcgcaagtga 25 |||||||||||||||||||| Sbjct: 2167788 aaagaattattcgcaagtga 2167769
>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132703 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aaagaattattcgcaagtga 25 |||||||||||||||||||| Sbjct: 50068 aaagaattattcgcaagtga 50049 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,010,219 Number of Sequences: 3902068 Number of extensions: 3010219 Number of successful extensions: 61723 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61074 Number of HSP's gapped (non-prelim): 649 length of query: 390 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 368 effective length of database: 17,147,199,772 effective search space: 6310169516096 effective search space used: 6310169516096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
