ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl04d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC125495.4| Oryza sativa (japonica cultivar-group) chromosome... 107 3e-20
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 107 3e-20
3gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome... 107 3e-20
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
5dbj|AK100569.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
6dbj|AK059232.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
7ref|NM_187512.1| Oryza sativa (japonica cultivar-group), predic... 103 5e-19
8gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca co... 42 1.5
9gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CI... 42 1.5
10gb|AC119425.2| Homo sapiens chromosome 1 clone RP11-456A2, compl... 42 1.5
11gb|AC020926.8| Homo sapiens chromosome 16 clone CTD-2152G12, com... 42 1.5
12ref|XM_526012.1| PREDICTED: Pan troglodytes parathyroid hormone ... 40 5.9
13ref|NM_005048.2| Homo sapiens parathyroid hormone receptor 2 (PT... 40 5.9
14gb|BT019441.1| Synthetic construct Homo sapiens parathyroid horm... 40 5.9
15gb|AY497546.1| Homo sapiens parathyroid hormone receptor 2 precu... 40 5.9
16emb|CR450764.3| Zebrafish DNA sequence from clone CH211-209F22 i... 40 5.9
17emb|AL603844.7| Human DNA sequence from clone RP11-541I21 on chr... 40 5.9
18emb|AL592504.6| Human DNA sequence from clone RP11-320J16 on chr... 40 5.9
19emb|AL441964.4| Human DNA sequence from clone RP11-151G12 on chr... 40 5.9
20emb|AL390023.8| Human DNA sequence from clone RP5-926E3 on chrom... 40 5.9
21emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 5.9
22emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, ... 40 5.9
23emb|BX000700.38| Zebrafish DNA sequence from clone DKEY-27D5 in ... 40 5.9
24emb|BX470258.4| Zebrafish DNA sequence from clone CH211-278L13 i... 40 5.9
25gb|AC161106.13| Medicago truncatula clone mth2-168f23, complete ... 40 5.9
26emb|BX469912.5| Zebrafish DNA sequence from clone CH211-156L18 i... 40 5.9
27gb|AC079374.4|AC079374 Arabidopsis thaliana chromosome 1 BAC F4F... 40 5.9
28gb|AC012362.7| Homo sapiens BAC clone RP11-404D15 from 2, comple... 40 5.9
29gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana... 40 5.9
30gb|AY891158.1| Synthetic construct Homo sapiens clone FLH009003.... 40 5.9
31gb|BC036811.1| Homo sapiens parathyroid hormone receptor 2, mRNA... 40 5.9
32emb|CR931725.6| Zebrafish DNA sequence from clone DKEY-22M10 in ... 40 5.9
33emb|CR450709.12| Zebrafish DNA sequence from clone CH211-249J24 ... 40 5.9
34gb|U25128.1|HSU25128 Human PTH2 parathyroid hormone receptor mRN... 40 5.9
35emb|CT476806.2| Pan troglodytes chromosome X BAC RP43-032D14, co... 40 5.9
36gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genom... 40 5.9 
>gb|AC125495.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0085M22,
              complete sequence
          Length = 145104

 Score =  107 bits (54), Expect = 3e-20
 Identities = 99/114 (86%)
 Strand = Plus / Plus

                                                                          
Query: 316    gatcatcttctactggcaaatgccgccaatgcattcgcatgagctggtggtagagtactt 375
              |||||||| ||| |||||||||  || |||||||| |||||||| ||||| |||| ||| 
Sbjct: 141869 gatcatctcctattggcaaatgatgctaatgcattagcatgagcgggtggcagagcactc 141928

                                                                    
Query: 376    agtatcggctgcatctgctgaccataaacagatatcaaatgagaaacagccttg 429
              | ||| || ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 141929 aatataggttgcatttgctgaccataaacagatatcaaatgagaaacggccttg 141982
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  107 bits (54), Expect = 3e-20
 Identities = 99/114 (86%)
 Strand = Plus / Plus

                                                                           
Query: 316     gatcatcttctactggcaaatgccgccaatgcattcgcatgagctggtggtagagtactt 375
               |||||||| ||| |||||||||  || |||||||| |||||||| ||||| |||| ||| 
Sbjct: 8519664 gatcatctcctattggcaaatgatgctaatgcattagcatgagcgggtggcagagcactc 8519723

                                                                     
Query: 376     agtatcggctgcatctgctgaccataaacagatatcaaatgagaaacagccttg 429
               | ||| || ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 8519724 aatataggttgcatttgctgaccataaacagatatcaaatgagaaacggccttg 8519777
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>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
           OJ1041F02, complete sequence
          Length = 137327

 Score =  107 bits (54), Expect = 3e-20
 Identities = 99/114 (86%)
 Strand = Plus / Plus

                                                                       
Query: 316 gatcatcttctactggcaaatgccgccaatgcattcgcatgagctggtggtagagtactt 375
           |||||||| ||| |||||||||  || |||||||| |||||||| ||||| |||| ||| 
Sbjct: 636 gatcatctcctattggcaaatgatgctaatgcattagcatgagcgggtggcagagcactc 695

                                                                 
Query: 376 agtatcggctgcatctgctgaccataaacagatatcaaatgagaaacagccttg 429
           | ||| || ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 696 aatataggttgcatttgctgaccataaacagatatcaaatgagaaacggccttg 749
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  107 bits (54), Expect = 3e-20
 Identities = 99/114 (86%)
 Strand = Plus / Plus

                                                                           
Query: 316     gatcatcttctactggcaaatgccgccaatgcattcgcatgagctggtggtagagtactt 375
               |||||||| ||| |||||||||  || |||||||| |||||||| ||||| |||| ||| 
Sbjct: 8517499 gatcatctcctattggcaaatgatgctaatgcattagcatgagcgggtggcagagcactc 8517558

                                                                     
Query: 376     agtatcggctgcatctgctgaccataaacagatatcaaatgagaaacagccttg 429
               | ||| || ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 8517559 aatataggttgcatttgctgaccataaacagatatcaaatgagaaacggccttg 8517612
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>dbj|AK100569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105A03, full
            insert sequence
          Length = 2144

 Score =  107 bits (54), Expect = 3e-20
 Identities = 99/114 (86%)
 Strand = Plus / Minus

                                                                        
Query: 316  gatcatcttctactggcaaatgccgccaatgcattcgcatgagctggtggtagagtactt 375
            |||||||| ||| |||||||||  || |||||||| |||||||| ||||| |||| ||| 
Sbjct: 1701 gatcatctcctattggcaaatgatgctaatgcattagcatgagcgggtggcagagcactc 1642

                                                                  
Query: 376  agtatcggctgcatctgctgaccataaacagatatcaaatgagaaacagccttg 429
            | ||| || ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 1641 aatataggttgcatttgctgaccataaacagatatcaaatgagaaacggccttg 1588
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>dbj|AK059232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-E07, full
           insert sequence
          Length = 1389

 Score =  107 bits (54), Expect = 3e-20
 Identities = 99/114 (86%)
 Strand = Plus / Minus

                                                                       
Query: 316 gatcatcttctactggcaaatgccgccaatgcattcgcatgagctggtggtagagtactt 375
           |||||||| ||| |||||||||  || |||||||| |||||||| ||||| |||| ||| 
Sbjct: 971 gatcatctcctattggcaaatgatgctaatgcattagcatgagcgggtggcagagcactc 912

                                                                 
Query: 376 agtatcggctgcatctgctgaccataaacagatatcaaatgagaaacagccttg 429
           | ||| || ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 911 aatataggttgcatttgctgaccataaacagatatcaaatgagaaacggccttg 858
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>ref|NM_187512.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2883

 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                        
Query: 318  tcatcttctactggcaaatgccgccaatgcattcgcatgagctggtggtagagtacttag 377
            |||||| ||| |||||||||  || |||||||| |||||||| ||||| |||| ||| | 
Sbjct: 2883 tcatctcctattggcaaatgatgctaatgcattagcatgagcgggtggcagagcactcaa 2824

                                                                
Query: 378  tatcggctgcatctgctgaccataaacagatatcaaatgagaaacagccttg 429
            ||| || ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 2823 tataggttgcatttgctgaccataaacagatatcaaatgagaaacggccttg 2772
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>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete
            genome
          Length = 686194

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 172  agctaaccaatattcttcagcaaat 196
            ||||||| |||||||||||||||||
Sbjct: 1880 agctaactaatattcttcagcaaat 1904
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>gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CIT987SK-44M2, complete sequence
          Length = 213541

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 113   tccaatgcaatatcactatca 133
             |||||||||||||||||||||
Sbjct: 55601 tccaatgcaatatcactatca 55581
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>gb|AC119425.2| Homo sapiens chromosome 1 clone RP11-456A2, complete sequence
          Length = 29405

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 194   aatggcactaatatcacaaaa 214
             |||||||||||||||||||||
Sbjct: 12272 aatggcactaatatcacaaaa 12292
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>gb|AC020926.8| Homo sapiens chromosome 16 clone CTD-2152G12, complete sequence
          Length = 93288

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 113   tccaatgcaatatcactatca 133
             |||||||||||||||||||||
Sbjct: 74735 tccaatgcaatatcactatca 74715
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>ref|XM_526012.1| PREDICTED: Pan troglodytes parathyroid hormone receptor 2
           (LOC470631), mRNA
          Length = 1902

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 296 aaggtaattgtttccctgaa 315
           ||||||||||||||||||||
Sbjct: 470 aaggtaattgtttccctgaa 489
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>ref|NM_005048.2| Homo sapiens parathyroid hormone receptor 2 (PTHR2), mRNA
          Length = 2810

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 296 aaggtaattgtttccctgaa 315
           ||||||||||||||||||||
Sbjct: 392 aaggtaattgtttccctgaa 411
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>gb|BT019441.1| Synthetic construct Homo sapiens parathyroid hormone receptor 2
           mRNA, partial cds
          Length = 1653

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 296 aaggtaattgtttccctgaa 315
           ||||||||||||||||||||
Sbjct: 179 aaggtaattgtttccctgaa 198
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>gb|AY497546.1| Homo sapiens parathyroid hormone receptor 2 precursor (PTHR2) mRNA,
           complete cds
          Length = 1653

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 296 aaggtaattgtttccctgaa 315
           ||||||||||||||||||||
Sbjct: 179 aaggtaattgtttccctgaa 198
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>emb|CR450764.3| Zebrafish DNA sequence from clone CH211-209F22 in linkage group 11,
             complete sequence
          Length = 152815

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     aaaaaactgaaacacataatgaag 24
             ||||||||| ||||||||||||||
Sbjct: 33003 aaaaaactgtaacacataatgaag 32980
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>emb|AL603844.7| Human DNA sequence from clone RP11-541I21 on chromosome 1, complete
              sequence
          Length = 220185

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 260    aatcttaagaaaacacttgg 279
              ||||||||||||||||||||
Sbjct: 110658 aatcttaagaaaacacttgg 110677
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>emb|AL592504.6| Human DNA sequence from clone RP11-320J16 on chromosome X Contains part
             of a novel gene, complete sequence
          Length = 173828

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   caatattcttcagcaaatgg 198
             ||||||||||||||||||||
Sbjct: 57276 caatattcttcagcaaatgg 57295
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>emb|AL441964.4| Human DNA sequence from clone RP11-151G12 on chromosome X Contains a
             mortality factor 4 like 1 (MORF4L1) pseudogene and a novel
             pseudogene, complete sequence
          Length = 92775

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 403   acagatatcaaatgagaaac 422
             ||||||||||||||||||||
Sbjct: 50777 acagatatcaaatgagaaac 50796
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>emb|AL390023.8| Human DNA sequence from clone RP5-926E3 on chromosome 1p32.3-34.1
              Contains part of the gene for a novel protein and a
              pseudogene similar to part of ribosomal protein S11
              (RPS11), complete sequence
          Length = 131237

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aaaaaactgaaacacataat 20
              ||||||||||||||||||||
Sbjct: 114042 aaaaaactgaaacacataat 114023
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>emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 5
          Length = 209164

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 396    accataaacagatatcaaatgagaaaca 423
              |||| ||||| |||||||||||||||||
Sbjct: 138892 accaaaaacacatatcaaatgagaaaca 138865
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>emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 43
          Length = 198226

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 396    accataaacagatatcaaatgagaaaca 423
              |||| ||||| |||||||||||||||||
Sbjct: 107882 accaaaaacacatatcaaatgagaaaca 107855
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>emb|BX000700.38| Zebrafish DNA sequence from clone DKEY-27D5 in linkage group 11, complete
              sequence
          Length = 223355

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      aaaaaactgaaacacataatgaag 24
              ||||||||| ||||||||||||||
Sbjct: 217040 aaaaaactgtaacacataatgaag 217017



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      aaaaaactgaaacacataatgaag 24
              ||||||||| ||||||||||||||
Sbjct: 140480 aaaaaactgtaacacataatgaag 140457



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      aaaaaactgaaacacataatgaag 24
              ||||||||| ||||||||||||||
Sbjct: 120412 aaaaaactgtaacacataatgaag 120389



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     aaaaaactgaaacacataatgaag 24
             ||||||||| ||||||||||||||
Sbjct: 85882 aaaaaactgtaacacataatgaag 85859



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 1    aaaaaactgaaacacataatgaag 24
            ||||||||| ||||||||||||||
Sbjct: 2476 aaaaaactgtaacacataatgaag 2453
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>emb|BX470258.4| Zebrafish DNA sequence from clone CH211-278L13 in linkage group 15,
              complete sequence
          Length = 184626

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      aaaaaactgaaacacataatgaag 24
              ||||||||| ||||||||||||||
Sbjct: 159837 aaaaaactgtaacacataatgaag 159814



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     aaaaaactgaaacacataatgaag 24
             ||||||||| ||||||||||||||
Sbjct: 92330 aaaaaactgtaacacataatgaag 92307



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     aaaaaactgaaacacataatgaag 24
             ||||||||| ||||||||||||||
Sbjct: 67641 aaaaaactgtaacacataatgaag 67618
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>gb|AC161106.13| Medicago truncatula clone mth2-168f23, complete sequence
          Length = 94766

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    agtactgcaccttcaaccac 100
             ||||||||||||||||||||
Sbjct: 46526 agtactgcaccttcaaccac 46507
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>emb|BX469912.5| Zebrafish DNA sequence from clone CH211-156L18 in linkage group 11,
            complete sequence
          Length = 175462

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 1    aaaaaactgaaacacataatgaag 24
            ||||||||| ||||||||||||||
Sbjct: 4826 aaaaaactgtaacacataatgaag 4849
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>gb|AC079374.4|AC079374 Arabidopsis thaliana chromosome 1 BAC F4F7 genomic sequence, complete
             sequence
          Length = 89690

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaaaaactgaaacacataat 20
             ||||||||||||||||||||
Sbjct: 48091 aaaaaactgaaacacataat 48110
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>gb|AC012362.7| Homo sapiens BAC clone RP11-404D15 from 2, complete sequence
          Length = 156618

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    aaggtaattgtttccctgaa 315
              ||||||||||||||||||||
Sbjct: 133982 aaggtaattgtttccctgaa 134001
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>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I,
             complete sequence
          Length = 84203

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 9     gaaacacataatgaagtagccaaa 32
             ||||| ||||||||||||||||||
Sbjct: 64975 gaaacccataatgaagtagccaaa 64998
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>gb|AY891158.1| Synthetic construct Homo sapiens clone FLH009003.01L parathyroid
           hormone receptor 2 (PTHR2) mRNA, partial cds
          Length = 1653

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 296 aaggtaattgtttccctgaa 315
           ||||||||||||||||||||
Sbjct: 179 aaggtaattgtttccctgaa 198
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>gb|BC036811.1| Homo sapiens parathyroid hormone receptor 2, mRNA (cDNA clone
           MGC:46164 IMAGE:5734330), complete cds
          Length = 2810

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 296 aaggtaattgtttccctgaa 315
           ||||||||||||||||||||
Sbjct: 392 aaggtaattgtttccctgaa 411
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>emb|CR931725.6| Zebrafish DNA sequence from clone DKEY-22M10 in linkage group 11,
              complete sequence
          Length = 205299

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      aaaaaactgaaacacataatgaag 24
              ||||||||| ||||||||||||||
Sbjct: 175134 aaaaaactgtaacacataatgaag 175157



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 1      aaaaaactgaaacacataatgaag 24
              ||||||||| ||||||||||||||
Sbjct: 102082 aaaaaactgtaacacataatgaag 102105



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     aaaaaactgaaacacataatgaag 24
             ||||||||| ||||||||||||||
Sbjct: 54537 aaaaaactgtaacacataatgaag 54560



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     aaaaaactgaaacacataatgaag 24
             ||||||||| ||||||||||||||
Sbjct: 30136 aaaaaactgtaacacataatgaag 30159
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>emb|CR450709.12| Zebrafish DNA sequence from clone CH211-249J24 in linkage group 11,
              complete sequence
          Length = 157745

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      aaaaaactgaaacacataatgaag 24
              ||||||||| ||||||||||||||
Sbjct: 129911 aaaaaactgtaacacataatgaag 129888



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     aaaaaactgaaacacataatgaag 24
             ||||||||| ||||||||||||||
Sbjct: 94796 aaaaaactgtaacacataatgaag 94773



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     aaaaaactgaaacacataatgaag 24
             ||||||||| ||||||||||||||
Sbjct: 76543 aaaaaactgtaacacataatgaag 76520
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>gb|U25128.1|HSU25128 Human PTH2 parathyroid hormone receptor mRNA, complete cds
          Length = 2641

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 296 aaggtaattgtttccctgaa 315
           ||||||||||||||||||||
Sbjct: 321 aaggtaattgtttccctgaa 340
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>emb|CT476806.2| Pan troglodytes chromosome X BAC RP43-032D14, complete sequence
          Length = 145919

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    caatattcttcagcaaatgg 198
              ||||||||||||||||||||
Sbjct: 126442 caatattcttcagcaaatgg 126423
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>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete
             sequence
          Length = 103223

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 9     gaaacacataatgaagtagccaaa 32
             ||||| ||||||||||||||||||
Sbjct: 14426 gaaacccataatgaagtagccaaa 14449


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,858,728
Number of Sequences: 3902068
Number of extensions: 3858728
Number of successful extensions: 70050
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69943
Number of HSP's gapped (non-prelim): 107
length of query: 438
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 416
effective length of database: 17,147,199,772
effective search space: 7133235105152
effective search space used: 7133235105152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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